RNA–Protein interactions for RNA: ENST00000616578.1

LINC02335-201, Transcript of long intergenic non-protein coding RNA 2335, humanhuman

TSL 3 BASIC

Gene LINC02335, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02335-201ENST00000616578 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
LINC02335-201ENST00000616578 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
LINC02335-201ENST00000616578 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
LINC02335-201ENST00000616578 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
LINC02335-201ENST00000616578 RSPH4AQ5TD94 716 aa12.19□□□□□ -0.46
LINC02335-201ENST00000616578 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
LINC02335-201ENST00000616578 ANKK1Q8NFD2 765 aa12.18□□□□□ -0.46
LINC02335-201ENST00000616578 SLF2Q8IX21 1173 aa12.17□□□□□ -0.46
LINC02335-201ENST00000616578 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
LINC02335-201ENST00000616578 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
LINC02335-201ENST00000616578 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
LINC02335-201ENST00000616578 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
LINC02335-201ENST00000616578 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
LINC02335-201ENST00000616578 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
LINC02335-201ENST00000616578 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
LINC02335-201ENST00000616578 WNT2BQ93097 391 aa12.12□□□□□ -0.47
LINC02335-201ENST00000616578 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
LINC02335-201ENST00000616578 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
LINC02335-201ENST00000616578 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
LINC02335-201ENST00000616578 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
LINC02335-201ENST00000616578 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
LINC02335-201ENST00000616578 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
LINC02335-201ENST00000616578 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
LINC02335-201ENST00000616578 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
LINC02335-201ENST00000616578 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
LINC02335-201ENST00000616578 CD46P15529 392 aa12.07□□□□□ -0.48
LINC02335-201ENST00000616578 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
LINC02335-201ENST00000616578 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
LINC02335-201ENST00000616578 MS4A1P11836 297 aa12.05□□□□□ -0.48
LINC02335-201ENST00000616578 THSD4Q6ZMP0 1018 aa12.05□□□□□ -0.48
LINC02335-201ENST00000616578 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
LINC02335-201ENST00000616578 RNF40O75150 1001 aa12.04□□□□□ -0.48
LINC02335-201ENST00000616578 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
LINC02335-201ENST00000616578 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
LINC02335-201ENST00000616578 PPP4CP60510 307 aa12.02□□□□□ -0.49
LINC02335-201ENST00000616578 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
LINC02335-201ENST00000616578 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
LINC02335-201ENST00000616578 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
LINC02335-201ENST00000616578 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
LINC02335-201ENST00000616578 SLC10A3P09131 477 aa12.01□□□□□ -0.49
LINC02335-201ENST00000616578 USP46P62068 366 aa12.01□□□□□ -0.49
LINC02335-201ENST00000616578 GCGRP47871 477 aa12□□□□□ -0.49
LINC02335-201ENST00000616578 BCAMP50895 628 aa12□□□□□ -0.49
LINC02335-201ENST00000616578 TMEM132AQ24JP5 1023 aa12□□□□□ -0.49
LINC02335-201ENST00000616578 FAM117AQ9C073 453 aa12□□□□□ -0.49
LINC02335-201ENST00000616578 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
LINC02335-201ENST00000616578 CFHP08603 1231 aa11.98□□□□□ -0.49
LINC02335-201ENST00000616578 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
LINC02335-201ENST00000616578 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
LINC02335-201ENST00000616578 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
LINC02335-201ENST00000616578 KDM4AO75164 1064 aa11.96□□□□□ -0.49
LINC02335-201ENST00000616578 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
LINC02335-201ENST00000616578 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
LINC02335-201ENST00000616578 GJA5P36382 358 aa11.94□□□□□ -0.5
LINC02335-201ENST00000616578 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
LINC02335-201ENST00000616578 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
LINC02335-201ENST00000616578 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
LINC02335-201ENST00000616578 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
LINC02335-201ENST00000616578 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
LINC02335-201ENST00000616578 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
LINC02335-201ENST00000616578 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
LINC02335-201ENST00000616578 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
LINC02335-201ENST00000616578 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
LINC02335-201ENST00000616578 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
LINC02335-201ENST00000616578 HOXA2O43364 376 aa11.88□□□□□ -0.51
LINC02335-201ENST00000616578 APLP1P51693 650 aa11.88□□□□□ -0.51
LINC02335-201ENST00000616578 PTPN5P54829 565 aa11.88□□□□□ -0.51
LINC02335-201ENST00000616578 MYSM1Q5VVJ2 828 aa11.88□□□□□ -0.51
LINC02335-201ENST00000616578 FUT2Q10981 343 aa11.87□□□□□ -0.51
LINC02335-201ENST00000616578 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
LINC02335-201ENST00000616578 SPTLC1O15269 473 aa11.85□□□□□ -0.51
LINC02335-201ENST00000616578 CLK2P49760 499 aaKnown RBP11.85□□□□□ -0.51
LINC02335-201ENST00000616578 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
LINC02335-201ENST00000616578 NR1I2O75469 434 aa11.84□□□□□ -0.51
LINC02335-201ENST00000616578 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
LINC02335-201ENST00000616578 Q3C1V9 767 aa11.83□□□□□ -0.52
LINC02335-201ENST00000616578 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
LINC02335-201ENST00000616578 MOXD2PA6NHM9 499 aa11.82□□□□□ -0.52
LINC02335-201ENST00000616578 MORN1Q5T089 497 aa11.82□□□□□ -0.52
LINC02335-201ENST00000616578 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
LINC02335-201ENST00000616578 FDX1P10109 184 aa11.81□□□□□ -0.52
LINC02335-201ENST00000616578 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
LINC02335-201ENST00000616578 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
LINC02335-201ENST00000616578 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
LINC02335-201ENST00000616578 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
LINC02335-201ENST00000616578 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC02335-201ENST00000616578 NDUFV2P19404 249 aa11.76□□□□□ -0.53
LINC02335-201ENST00000616578 BLOC1S3Q6QNY0 202 aa11.76□□□□□ -0.53
LINC02335-201ENST00000616578 ZBTB3Q9H5J0 574 aa11.76□□□□□ -0.53
LINC02335-201ENST00000616578 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
LINC02335-201ENST00000616578 SLC27A5Q9Y2P5 690 aa11.76□□□□□ -0.53
LINC02335-201ENST00000616578 PUS10Q3MIT2 529 aaKnown RBP11.75□□□□□ -0.53
LINC02335-201ENST00000616578 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
LINC02335-201ENST00000616578 MTRQ99707 1265 aa11.75□□□□□ -0.53
LINC02335-201ENST00000616578 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
LINC02335-201ENST00000616578 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
LINC02335-201ENST00000616578 MTMR2Q13614 643 aa11.74□□□□□ -0.53
LINC02335-201ENST00000616578 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
LINC02335-201ENST00000616578 ZPR1O75312 459 aa11.73□□□□□ -0.53
LINC02335-201ENST00000616578 FMNL1O95466 1100 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms