RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
FDPS-221ENST00000612683 NUP155O75694 1391 aa22.52■■□□□ 1.2
FDPS-221ENST00000612683 TMEM94Q12767 1356 aa22.52■■□□□ 1.2
FDPS-221ENST00000612683 UNC13BO14795 1591 aa22.51■■□□□ 1.19
FDPS-221ENST00000612683 XIRP1Q702N8 1843 aaKnown RBP22.51■■□□□ 1.19
FDPS-221ENST00000612683 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
FDPS-221ENST00000612683 RIMS2Q9UQ26 1411 aa22.5■■□□□ 1.19
FDPS-221ENST00000612683 GCC2Q8IWJ2 1684 aa22.5■■□□□ 1.19
FDPS-221ENST00000612683 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.5■■□□□ 1.19
FDPS-221ENST00000612683 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
FDPS-221ENST00000612683 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
FDPS-221ENST00000612683 MYO5BQ9ULV0 1848 aa22.49■■□□□ 1.19
FDPS-221ENST00000612683 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
FDPS-221ENST00000612683 ZFYVE9O95405 1425 aa22.48■■□□□ 1.19
FDPS-221ENST00000612683 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
FDPS-221ENST00000612683 E9PCH4 1651 aa22.46■■□□□ 1.19
FDPS-221ENST00000612683 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
FDPS-221ENST00000612683 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
FDPS-221ENST00000612683 IQGAP3Q86VI3 1631 aa22.44■■□□□ 1.18
FDPS-221ENST00000612683 MSH6P52701 1360 aa22.41■■□□□ 1.18
FDPS-221ENST00000612683 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
FDPS-221ENST00000612683 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
FDPS-221ENST00000612683 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
FDPS-221ENST00000612683 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
FDPS-221ENST00000612683 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
FDPS-221ENST00000612683 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
FDPS-221ENST00000612683 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
FDPS-221ENST00000612683 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
FDPS-221ENST00000612683 ROBO1Q9Y6N7 1651 aa22.32■■□□□ 1.16
FDPS-221ENST00000612683 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
FDPS-221ENST00000612683 PIK3R4Q99570 1358 aa22.3■■□□□ 1.16
FDPS-221ENST00000612683 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
FDPS-221ENST00000612683 C19orf44Q9H6X5 657 aa22.29■■□□□ 1.16
FDPS-221ENST00000612683 NCOA3Q9Y6Q9 1424 aa22.29■■□□□ 1.16
FDPS-221ENST00000612683 ATF3P18847 181 aa22.28■■□□□ 1.16
FDPS-221ENST00000612683 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
FDPS-221ENST00000612683 NAIPQ13075 1403 aa22.27■■□□□ 1.16
FDPS-221ENST00000612683 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
FDPS-221ENST00000612683 SPHKAPQ2M3C7 1700 aa22.27■■□□□ 1.16
FDPS-221ENST00000612683 CADPS2Q86UW7 1296 aa22.27■■□□□ 1.16
FDPS-221ENST00000612683 TRPM2O94759 1503 aa22.24■■□□□ 1.15
FDPS-221ENST00000612683 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
FDPS-221ENST00000612683 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
FDPS-221ENST00000612683 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
FDPS-221ENST00000612683 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
FDPS-221ENST00000612683 JCADQ9P266 1359 aa22.19■■□□□ 1.14
FDPS-221ENST00000612683 METP08581 1390 aa22.18■■□□□ 1.14
FDPS-221ENST00000612683 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
FDPS-221ENST00000612683 POTEAQ6S8J7 498 aa22.17■■□□□ 1.14
FDPS-221ENST00000612683 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
FDPS-221ENST00000612683 HFM1A2PYH4 1435 aa22.16■■□□□ 1.14
FDPS-221ENST00000612683 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
FDPS-221ENST00000612683 NRXN3Q9Y4C0 1643 aa22.15■■□□□ 1.14
FDPS-221ENST00000612683 KIF1BO60333 1816 aa22.15■■□□□ 1.14
FDPS-221ENST00000612683 BRINP3Q76B58 766 aa22.13■■□□□ 1.13
FDPS-221ENST00000612683 NEXMIFQ5QGS0 1516 aa22.12■■□□□ 1.13
FDPS-221ENST00000612683 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
FDPS-221ENST00000612683 FOXD1Q16676 465 aa22.1■■□□□ 1.13
FDPS-221ENST00000612683 MEX3CQ5U5Q3 659 aaKnown RBP22.1■■□□□ 1.13
FDPS-221ENST00000612683 COL16A1Q07092 1604 aaPredicted RBP22.09■■□□□ 1.13
FDPS-221ENST00000612683 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
FDPS-221ENST00000612683 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
FDPS-221ENST00000612683 DCCP43146 1447 aa22.08■■□□□ 1.13
FDPS-221ENST00000612683 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
FDPS-221ENST00000612683 NUTM2BA6NNL0 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-221ENST00000612683 NUTM2EB1AL46 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-221ENST00000612683 NUTM2AQ8IVF1 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-221ENST00000612683 MST1RQ04912 1400 aa22.04■■□□□ 1.12
FDPS-221ENST00000612683 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
FDPS-221ENST00000612683 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
FDPS-221ENST00000612683 RGL3Q3MIN7 710 aa22.02■■□□□ 1.12
FDPS-221ENST00000612683 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
FDPS-221ENST00000612683 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
FDPS-221ENST00000612683 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
FDPS-221ENST00000612683 LRP6O75581 1613 aa22■■□□□ 1.11
FDPS-221ENST00000612683 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
FDPS-221ENST00000612683 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
FDPS-221ENST00000612683 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
FDPS-221ENST00000612683 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
FDPS-221ENST00000612683 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
FDPS-221ENST00000612683 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
FDPS-221ENST00000612683 NALCNQ8IZF0 1738 aa21.95■■□□□ 1.1
FDPS-221ENST00000612683 PPLO60437 1756 aa21.95■■□□□ 1.1
FDPS-221ENST00000612683 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
FDPS-221ENST00000612683 ORAI2Q96SN7 254 aa21.94■■□□□ 1.1
FDPS-221ENST00000612683 C1orf167Q5SNV9 1468 aa21.94■■□□□ 1.1
FDPS-221ENST00000612683 SETD1AO15047 1707 aaKnown RBP21.93■■□□□ 1.1
FDPS-221ENST00000612683 STK26Q9P289 416 aa21.93■■□□□ 1.1
FDPS-221ENST00000612683 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
FDPS-221ENST00000612683 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
FDPS-221ENST00000612683 RXRBP28702 533 aa21.9■■□□□ 1.1
FDPS-221ENST00000612683 ANKRD30BQ9BXX2 1392 aa21.89■■□□□ 1.1
FDPS-221ENST00000612683 TMEM132EQ6IEE7 984 aa21.89■■□□□ 1.09
FDPS-221ENST00000612683 SPATA31E1Q6ZUB1 1445 aa21.89■■□□□ 1.09
FDPS-221ENST00000612683 AFF2P51816 1311 aa21.88■■□□□ 1.09
FDPS-221ENST00000612683 WAPLQ7Z5K2 1190 aa21.88■■□□□ 1.09
FDPS-221ENST00000612683 C8orf37Q96NL8 207 aa21.88■■□□□ 1.09
FDPS-221ENST00000612683 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
FDPS-221ENST00000612683 ESCO1Q5FWF5 840 aa21.87■■□□□ 1.09
FDPS-221ENST00000612683 PRAG1Q86YV5 1406 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms