RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 PPP1R15AO75807 674 aaPredicted RBP37.25■■■■□ 3.55
SNX5-219ENST00000606602 HDGFP51858 240 aaKnown RBP37.25■■■■□ 3.55
SNX5-219ENST00000606602 XIRP1Q702N8 1843 aaKnown RBP37.24■■■■□ 3.55
SNX5-219ENST00000606602 CHGAP10645 457 aaKnown RBP37.24■■■■□ 3.55
SNX5-219ENST00000606602 GCC2Q8IWJ2 1684 aa37.24■■■■□ 3.55
SNX5-219ENST00000606602 ZFYVE9O95405 1425 aa37.23■■■■□ 3.55
SNX5-219ENST00000606602 RIMS2Q9UQ26 1411 aa37.23■■■■□ 3.55
SNX5-219ENST00000606602 RBM33Q96EV2 1170 aaKnown RBP37.22■■■■□ 3.55
SNX5-219ENST00000606602 NUP155O75694 1391 aa37.2■■■■□ 3.55
SNX5-219ENST00000606602 PLEKHG1Q9ULL1 1385 aa37.2■■■■□ 3.55
SNX5-219ENST00000606602 PHF23Q9BUL5 403 aaPredicted RBP37.19■■■■□ 3.54
SNX5-219ENST00000606602 TMEM131LA2VDJ0 1609 aa37.18■■■■□ 3.54
SNX5-219ENST00000606602 E9PCH4 1651 aa37.16■■■■□ 3.54
SNX5-219ENST00000606602 IQGAP3Q86VI3 1631 aa37.16■■■■□ 3.54
SNX5-219ENST00000606602 NKTRP30414 1462 aaKnown RBP37.15■■■■□ 3.54
SNX5-219ENST00000606602 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.15■■■■□ 3.54
SNX5-219ENST00000606602 FAM135BQ49AJ0 1406 aa37.14■■■■□ 3.54
SNX5-219ENST00000606602 NWD1Q149M9 1564 aa37.13■■■■□ 3.53
SNX5-219ENST00000606602 MYO5BQ9ULV0 1848 aa37.13■■■■□ 3.53
SNX5-219ENST00000606602 NUTM2DQ5VT03 806 aaPredicted RBP37.1■■■■□ 3.53
SNX5-219ENST00000606602 TBX22Q9Y458 520 aa37.09■■■■□ 3.53
SNX5-219ENST00000606602 MSH6P52701 1360 aa37.06■■■■□ 3.52
SNX5-219ENST00000606602 ADAMTS13Q76LX8 1427 aa36.99■■■■□ 3.51
SNX5-219ENST00000606602 SLAIN2Q9P270 581 aa36.98■■■■□ 3.51
SNX5-219ENST00000606602 CHD2O14647 1828 aaKnown RBP36.97■■■■□ 3.51
SNX5-219ENST00000606602 ROBO1Q9Y6N7 1651 aa36.96■■■■□ 3.51
SNX5-219ENST00000606602 C14orf37Q86TY3 774 aa36.93■■■■□ 3.5
SNX5-219ENST00000606602 RRBP1Q9P2E9 1410 aaKnown RBP36.93■■■■□ 3.5
SNX5-219ENST00000606602 PIK3R4Q99570 1358 aa36.91■■■■□ 3.5
SNX5-219ENST00000606602 DIP2AQ14689 1571 aa36.91■■■■□ 3.5
SNX5-219ENST00000606602 NCOA3Q9Y6Q9 1424 aa36.9■■■■□ 3.5
SNX5-219ENST00000606602 ZNF326Q5BKZ1 582 aaKnown RBP36.87■■■■□ 3.49
SNX5-219ENST00000606602 RGS17Q9UGC6 210 aaPredicted RBP36.85■■■■□ 3.49
SNX5-219ENST00000606602 AMOTL2Q9Y2J4 779 aa36.85■■■■□ 3.49
SNX5-219ENST00000606602 SPHKAPQ2M3C7 1700 aa36.84■■■■□ 3.49
SNX5-219ENST00000606602 TRPM2O94759 1503 aa36.84■■■■□ 3.49
SNX5-219ENST00000606602 NAIPQ13075 1403 aa36.84■■■■□ 3.49
SNX5-219ENST00000606602 C19orf44Q9H6X5 657 aa36.81■■■■□ 3.48
SNX5-219ENST00000606602 PTPRUQ92729 1446 aa36.79■■■■□ 3.48
SNX5-219ENST00000606602 ATF3P18847 181 aa36.79■■■■□ 3.48
SNX5-219ENST00000606602 CADPS2Q86UW7 1296 aa36.79■■■■□ 3.48
SNX5-219ENST00000606602 PHLPP1O60346 1717 aa36.74■■■■□ 3.47
SNX5-219ENST00000606602 TRIM52Q96A61 297 aa36.74■■■■□ 3.47
SNX5-219ENST00000606602 JCADQ9P266 1359 aa36.73■■■■□ 3.47
SNX5-219ENST00000606602 SETBP1Q9Y6X0 1596 aa36.73■■■■□ 3.47
SNX5-219ENST00000606602 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.71■■■■□ 3.47
SNX5-219ENST00000606602 CLTCL1P53675 1640 aa36.71■■■■□ 3.47
SNX5-219ENST00000606602 NRXN3Q9Y4C0 1643 aa36.7■■■■□ 3.47
SNX5-219ENST00000606602 HFM1A2PYH4 1435 aa36.68■■■■□ 3.46
SNX5-219ENST00000606602 METP08581 1390 aa36.68■■■■□ 3.46
SNX5-219ENST00000606602 POTEAQ6S8J7 498 aa36.66■■■■□ 3.46
SNX5-219ENST00000606602 NEXMIFQ5QGS0 1516 aa36.64■■■■□ 3.46
SNX5-219ENST00000606602 COL16A1Q07092 1604 aaPredicted RBP36.63■■■■□ 3.45
SNX5-219ENST00000606602 XRN1Q8IZH2 1706 aaKnown RBP36.62■■■■□ 3.45
SNX5-219ENST00000606602 SLC4A1APQ9BWU0 796 aaKnown RBP36.62■■■■□ 3.45
SNX5-219ENST00000606602 DCCP43146 1447 aa36.59■■■■□ 3.45
SNX5-219ENST00000606602 BRINP3Q76B58 766 aa36.59■■■■□ 3.45
SNX5-219ENST00000606602 AHDC1Q5TGY3 1603 aaPredicted RBP36.56■■■■□ 3.44
SNX5-219ENST00000606602 KIF1BO60333 1816 aa36.55■■■■□ 3.44
SNX5-219ENST00000606602 VGFO15240 615 aaPredicted RBP36.55■■■■□ 3.44
SNX5-219ENST00000606602 SPATA31A6Q5VVP1 1343 aa36.55■■■■□ 3.44
SNX5-219ENST00000606602 MEX3CQ5U5Q3 659 aaKnown RBP36.5■■■■□ 3.43
SNX5-219ENST00000606602 MST1RQ04912 1400 aa36.5■■■■□ 3.43
SNX5-219ENST00000606602 RPGRIP1LQ68CZ1 1315 aa36.49■■■■□ 3.43
SNX5-219ENST00000606602 ADGRL3Q9HAR2 1447 aa36.49■■■■□ 3.43
SNX5-219ENST00000606602 LRP6O75581 1613 aa36.47■■■■□ 3.43
SNX5-219ENST00000606602 ASXL1Q8IXJ9 1541 aa36.46■■■■□ 3.43
SNX5-219ENST00000606602 FOXD1Q16676 465 aa36.46■■■■□ 3.43
SNX5-219ENST00000606602 SHPRHQ149N8 1683 aa36.41■■■■□ 3.42
SNX5-219ENST00000606602 NUTM2BA6NNL0 878 aaPredicted RBP36.38■■■■□ 3.41
SNX5-219ENST00000606602 NUTM2EB1AL46 878 aaPredicted RBP36.38■■■■□ 3.41
SNX5-219ENST00000606602 PTCH1Q13635 1447 aa36.38■■■■□ 3.41
SNX5-219ENST00000606602 NUTM2AQ8IVF1 878 aaPredicted RBP36.38■■■■□ 3.41
SNX5-219ENST00000606602 ROBO2Q9HCK4 1378 aa36.38■■■■□ 3.41
SNX5-219ENST00000606602 NALCNQ8IZF0 1738 aa36.37■■■■□ 3.41
SNX5-219ENST00000606602 SETD5Q9C0A6 1442 aa36.36■■■■□ 3.41
SNX5-219ENST00000606602 ZNF772Q68DY9 489 aaPredicted RBP36.36■■■■□ 3.41
SNX5-219ENST00000606602 DDX17Q92841 729 aaKnown RBP36.35■■■■□ 3.41
SNX5-219ENST00000606602 LRRC59Q96AG4 307 aaKnown RBP36.35■■■■□ 3.41
SNX5-219ENST00000606602 MPHOSPH9Q99550 1183 aa36.33■■■■□ 3.41
SNX5-219ENST00000606602 SETD1AO15047 1707 aaKnown RBP36.33■■■■□ 3.41
SNX5-219ENST00000606602 CCDC144AA2RUR9 1427 aa36.33■■■■□ 3.41
SNX5-219ENST00000606602 C1orf167Q5SNV9 1468 aa36.31■■■■□ 3.4
SNX5-219ENST00000606602 NHSL1Q5SYE7 1610 aa36.31■■■■□ 3.4
SNX5-219ENST00000606602 PPLO60437 1756 aa36.3■■■■□ 3.4
SNX5-219ENST00000606602 RGL3Q3MIN7 710 aa36.3■■■■□ 3.4
SNX5-219ENST00000606602 PRAG1Q86YV5 1406 aa36.28■■■■□ 3.4
SNX5-219ENST00000606602 ADGRF5Q8IZF2 1346 aa36.27■■■■□ 3.4
SNX5-219ENST00000606602 ORAI2Q96SN7 254 aa36.24■■■■□ 3.39
SNX5-219ENST00000606602 SPATA31E1Q6ZUB1 1445 aa36.23■■■■□ 3.39
SNX5-219ENST00000606602 PNPLA6Q8IY17 1366 aa36.22■■■■□ 3.39
SNX5-219ENST00000606602 ANKRD30BQ9BXX2 1392 aa36.2■■■■□ 3.39
SNX5-219ENST00000606602 AFF2P51816 1311 aa36.19■■■■□ 3.38
SNX5-219ENST00000606602 STK26Q9P289 416 aa36.18■■■■□ 3.38
SNX5-219ENST00000606602 RXRBP28702 533 aa36.17■■■■□ 3.38
SNX5-219ENST00000606602 C8orf37Q96NL8 207 aa36.15■■■■□ 3.38
SNX5-219ENST00000606602 SOS2Q07890 1332 aaPredicted RBP36.14■■■■□ 3.38
SNX5-219ENST00000606602 ACIN1Q9UKV3 1341 aaKnown RBP36.14■■■■□ 3.38
SNX5-219ENST00000606602 TMEM132EQ6IEE7 984 aa36.11■■■■□ 3.37
SNX5-219ENST00000606602 LAMC1P11047 1609 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms