RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
HMGB1P51-201ENST00000605166 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
HMGB1P51-201ENST00000605166 TRAK2O60296 914 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 COL9A1P20849 921 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P51-201ENST00000605166 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
HMGB1P51-201ENST00000605166 OATP04181 439 aa10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
HMGB1P51-201ENST00000605166 LAPTM4BQ86VI4 370 aa10.09□□□□□ -0.79
HMGB1P51-201ENST00000605166 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
HMGB1P51-201ENST00000605166 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 TRIM26Q12899 539 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROX2Q3B8N5 592 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROSER2Q86WR7 435 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 WNT2BQ93097 391 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 PRSS12P56730 875 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 RAD21O60216 631 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 ANKK1Q8NFD2 765 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 HRCP23327 699 aa10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
HMGB1P51-201ENST00000605166 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
HMGB1P51-201ENST00000605166 BANK1Q8NDB2 785 aa10□□□□□ -0.81
HMGB1P51-201ENST00000605166 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 PTPN5P54829 565 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 POM121Q96HA1 1249 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 RFC5P40937 340 aa9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 SERPINA10Q9UK55 444 aa9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 TATDN2Q93075 761 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
HMGB1P51-201ENST00000605166 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
HMGB1P51-201ENST00000605166 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 CD46P15529 392 aa9.9□□□□□ -0.82
HMGB1P51-201ENST00000605166 SLC4A3P48751 1232 aa9.9□□□□□ -0.82
HMGB1P51-201ENST00000605166 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SOCS7O14512 581 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 BCAMP50895 628 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SMAPO00193 183 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 SPTLC1O15269 473 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 EYA1Q99502 592 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 PPP4CP60510 307 aa9.87□□□□□ -0.83
HMGB1P51-201ENST00000605166 GJA5P36382 358 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 MTMR14Q8NCE2 650 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
HMGB1P51-201ENST00000605166 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms