RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 XIRP1Q702N8 1843 aaKnown RBP28.97■■■□□ 2.23
SNRPA-204ENST00000598452 PROSER2Q86WR7 435 aaPredicted RBP28.95■■■□□ 2.22
SNRPA-204ENST00000598452 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
SNRPA-204ENST00000598452 CHGAP10645 457 aaKnown RBP28.94■■■□□ 2.22
SNRPA-204ENST00000598452 RIMS2Q9UQ26 1411 aa28.93■■■□□ 2.22
SNRPA-204ENST00000598452 GCC2Q8IWJ2 1684 aa28.93■■■□□ 2.22
SNRPA-204ENST00000598452 NUP155O75694 1391 aa28.91■■■□□ 2.22
SNRPA-204ENST00000598452 PPP1R15AO75807 674 aaPredicted RBP28.91■■■□□ 2.22
SNRPA-204ENST00000598452 TMEM131LA2VDJ0 1609 aa28.91■■■□□ 2.22
SNRPA-204ENST00000598452 E9PCH4 1651 aa28.9■■■□□ 2.22
SNRPA-204ENST00000598452 PLEKHG1Q9ULL1 1385 aa28.89■■■□□ 2.22
SNRPA-204ENST00000598452 MYO5BQ9ULV0 1848 aa28.89■■■□□ 2.22
SNRPA-204ENST00000598452 IQGAP3Q86VI3 1631 aa28.88■■■□□ 2.21
SNRPA-204ENST00000598452 NUTM2DQ5VT03 806 aaPredicted RBP28.88■■■□□ 2.21
SNRPA-204ENST00000598452 HDGFP51858 240 aaKnown RBP28.87■■■□□ 2.21
SNRPA-204ENST00000598452 NWD1Q149M9 1564 aa28.85■■■□□ 2.21
SNRPA-204ENST00000598452 PHF23Q9BUL5 403 aaPredicted RBP28.85■■■□□ 2.21
SNRPA-204ENST00000598452 NKTRP30414 1462 aaKnown RBP28.84■■■□□ 2.21
SNRPA-204ENST00000598452 FAM135BQ49AJ0 1406 aa28.83■■■□□ 2.21
SNRPA-204ENST00000598452 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
SNRPA-204ENST00000598452 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
SNRPA-204ENST00000598452 ADAMTS13Q76LX8 1427 aa28.77■■■□□ 2.2
SNRPA-204ENST00000598452 MSH6P52701 1360 aa28.76■■■□□ 2.2
SNRPA-204ENST00000598452 CHD2O14647 1828 aaKnown RBP28.73■■■□□ 2.19
SNRPA-204ENST00000598452 ROBO1Q9Y6N7 1651 aa28.73■■■□□ 2.19
SNRPA-204ENST00000598452 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
SNRPA-204ENST00000598452 SLAIN2Q9P270 581 aa28.71■■■□□ 2.19
SNRPA-204ENST00000598452 C14orf37Q86TY3 774 aa28.67■■■□□ 2.18
SNRPA-204ENST00000598452 RGS17Q9UGC6 210 aaPredicted RBP28.67■■■□□ 2.18
SNRPA-204ENST00000598452 NAIPQ13075 1403 aa28.65■■■□□ 2.18
SNRPA-204ENST00000598452 DIP2AQ14689 1571 aa28.65■■■□□ 2.18
SNRPA-204ENST00000598452 PIK3R4Q99570 1358 aa28.64■■■□□ 2.18
SNRPA-204ENST00000598452 ZNF326Q5BKZ1 582 aaKnown RBP28.64■■■□□ 2.18
SNRPA-204ENST00000598452 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
SNRPA-204ENST00000598452 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
SNRPA-204ENST00000598452 AMOTL2Q9Y2J4 779 aa28.63■■■□□ 2.17
SNRPA-204ENST00000598452 NCOA3Q9Y6Q9 1424 aa28.62■■■□□ 2.17
SNRPA-204ENST00000598452 TRPM2O94759 1503 aa28.6■■■□□ 2.17
SNRPA-204ENST00000598452 C19orf44Q9H6X5 657 aa28.58■■■□□ 2.17
SNRPA-204ENST00000598452 TRIM52Q96A61 297 aa28.56■■■□□ 2.16
SNRPA-204ENST00000598452 NRXN3Q9Y4C0 1643 aa28.56■■■□□ 2.16
SNRPA-204ENST00000598452 CLTCL1P53675 1640 aa28.55■■■□□ 2.16
SNRPA-204ENST00000598452 ATF3P18847 181 aa28.55■■■□□ 2.16
SNRPA-204ENST00000598452 CADPS2Q86UW7 1296 aa28.55■■■□□ 2.16
SNRPA-204ENST00000598452 PHLPP1O60346 1717 aa28.54■■■□□ 2.16
SNRPA-204ENST00000598452 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
SNRPA-204ENST00000598452 METP08581 1390 aa28.53■■■□□ 2.16
SNRPA-204ENST00000598452 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.53■■■□□ 2.16
SNRPA-204ENST00000598452 HFM1A2PYH4 1435 aa28.51■■■□□ 2.15
SNRPA-204ENST00000598452 JCADQ9P266 1359 aa28.5■■■□□ 2.15
SNRPA-204ENST00000598452 POTEAQ6S8J7 498 aa28.5■■■□□ 2.15
SNRPA-204ENST00000598452 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
SNRPA-204ENST00000598452 COL16A1Q07092 1604 aaPredicted RBP28.47■■■□□ 2.15
SNRPA-204ENST00000598452 XRN1Q8IZH2 1706 aaKnown RBP28.47■■■□□ 2.15
SNRPA-204ENST00000598452 SLC4A1APQ9BWU0 796 aaKnown RBP28.46■■■□□ 2.15
SNRPA-204ENST00000598452 BRINP3Q76B58 766 aa28.44■■■□□ 2.14
SNRPA-204ENST00000598452 AHDC1Q5TGY3 1603 aaPredicted RBP28.4■■■□□ 2.14
SNRPA-204ENST00000598452 FOXD1Q16676 465 aa28.4■■■□□ 2.14
SNRPA-204ENST00000598452 KIF1BO60333 1816 aa28.4■■■□□ 2.14
SNRPA-204ENST00000598452 DCCP43146 1447 aa28.4■■■□□ 2.14
SNRPA-204ENST00000598452 MST1RQ04912 1400 aa28.37■■■□□ 2.13
SNRPA-204ENST00000598452 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
SNRPA-204ENST00000598452 LRP6O75581 1613 aa28.36■■■□□ 2.13
SNRPA-204ENST00000598452 SPATA31A6Q5VVP1 1343 aa28.36■■■□□ 2.13
SNRPA-204ENST00000598452 ADGRL3Q9HAR2 1447 aa28.35■■■□□ 2.13
SNRPA-204ENST00000598452 ASXL1Q8IXJ9 1541 aa28.33■■■□□ 2.13
SNRPA-204ENST00000598452 RPGRIP1LQ68CZ1 1315 aa28.33■■■□□ 2.13
SNRPA-204ENST00000598452 MEX3CQ5U5Q3 659 aaKnown RBP28.32■■■□□ 2.12
SNRPA-204ENST00000598452 DDX17Q92841 729 aaKnown RBP28.3■■■□□ 2.12
SNRPA-204ENST00000598452 ROBO2Q9HCK4 1378 aa28.29■■■□□ 2.12
SNRPA-204ENST00000598452 NUTM2BA6NNL0 878 aaPredicted RBP28.28■■■□□ 2.12
SNRPA-204ENST00000598452 NUTM2EB1AL46 878 aaPredicted RBP28.28■■■□□ 2.12
SNRPA-204ENST00000598452 NUTM2AQ8IVF1 878 aaPredicted RBP28.28■■■□□ 2.12
SNRPA-204ENST00000598452 NALCNQ8IZF0 1738 aa28.27■■■□□ 2.12
SNRPA-204ENST00000598452 SHPRHQ149N8 1683 aa28.27■■■□□ 2.12
SNRPA-204ENST00000598452 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.12
SNRPA-204ENST00000598452 PTCH1Q13635 1447 aa28.26■■■□□ 2.11
SNRPA-204ENST00000598452 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
SNRPA-204ENST00000598452 RGL3Q3MIN7 710 aa28.24■■■□□ 2.11
SNRPA-204ENST00000598452 SETD5Q9C0A6 1442 aa28.24■■■□□ 2.11
SNRPA-204ENST00000598452 PPLO60437 1756 aa28.22■■■□□ 2.11
SNRPA-204ENST00000598452 CCDC144AA2RUR9 1427 aa28.22■■■□□ 2.11
SNRPA-204ENST00000598452 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
SNRPA-204ENST00000598452 C1orf167Q5SNV9 1468 aa28.21■■■□□ 2.11
SNRPA-204ENST00000598452 ADGRF5Q8IZF2 1346 aa28.21■■■□□ 2.11
SNRPA-204ENST00000598452 LRRC59Q96AG4 307 aaKnown RBP28.21■■■□□ 2.11
SNRPA-204ENST00000598452 ZNF772Q68DY9 489 aaPredicted RBP28.2■■■□□ 2.1
SNRPA-204ENST00000598452 ORAI2Q96SN7 254 aa28.18■■■□□ 2.1
SNRPA-204ENST00000598452 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
SNRPA-204ENST00000598452 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
SNRPA-204ENST00000598452 PNPLA6Q8IY17 1366 aa28.14■■■□□ 2.1
SNRPA-204ENST00000598452 ACIN1Q9UKV3 1341 aaKnown RBP28.14■■■□□ 2.09
SNRPA-204ENST00000598452 STK26Q9P289 416 aa28.13■■■□□ 2.09
SNRPA-204ENST00000598452 AFF2P51816 1311 aa28.12■■■□□ 2.09
SNRPA-204ENST00000598452 ANKRD30BQ9BXX2 1392 aa28.11■■■□□ 2.09
SNRPA-204ENST00000598452 TMEM132EQ6IEE7 984 aa28.1■■■□□ 2.09
SNRPA-204ENST00000598452 RXRBP28702 533 aa28.08■■■□□ 2.09
SNRPA-204ENST00000598452 WAPLQ7Z5K2 1190 aa28.08■■■□□ 2.09
SNRPA-204ENST00000598452 C8orf37Q96NL8 207 aa28.08■■■□□ 2.09
SNRPA-204ENST00000598452 SOS2Q07890 1332 aaPredicted RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms