RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
TGFB1-202ENST00000597453 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
TGFB1-202ENST00000597453 NUP155O75694 1391 aa23.19■■□□□ 1.3
TGFB1-202ENST00000597453 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
TGFB1-202ENST00000597453 KCNA6P17658 529 aa23.18■■□□□ 1.3
TGFB1-202ENST00000597453 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
TGFB1-202ENST00000597453 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
TGFB1-202ENST00000597453 PLEKHG1Q9ULL1 1385 aa23.15■■□□□ 1.3
TGFB1-202ENST00000597453 SOCS7O14512 581 aa23.15■■□□□ 1.3
TGFB1-202ENST00000597453 BCANQ96GW7 911 aa23.15■■□□□ 1.3
TGFB1-202ENST00000597453 NKTRP30414 1462 aaKnown RBP23.14■■□□□ 1.29
TGFB1-202ENST00000597453 CHD2O14647 1828 aaKnown RBP23.14■■□□□ 1.29
TGFB1-202ENST00000597453 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
TGFB1-202ENST00000597453 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
TGFB1-202ENST00000597453 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
TGFB1-202ENST00000597453 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
TGFB1-202ENST00000597453 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
TGFB1-202ENST00000597453 PROSER2Q86WR7 435 aaPredicted RBP23.11■■□□□ 1.29
TGFB1-202ENST00000597453 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
TGFB1-202ENST00000597453 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
TGFB1-202ENST00000597453 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
TGFB1-202ENST00000597453 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.06■■□□□ 1.28
TGFB1-202ENST00000597453 ROBO1Q9Y6N7 1651 aa23.06■■□□□ 1.28
TGFB1-202ENST00000597453 NAIPQ13075 1403 aa23.05■■□□□ 1.28
TGFB1-202ENST00000597453 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
TGFB1-202ENST00000597453 TBX22Q9Y458 520 aa23.04■■□□□ 1.28
TGFB1-202ENST00000597453 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
TGFB1-202ENST00000597453 MSH6P52701 1360 aa23.01■■□□□ 1.27
TGFB1-202ENST00000597453 CLTCL1P53675 1640 aa23■■□□□ 1.27
TGFB1-202ENST00000597453 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
TGFB1-202ENST00000597453 TRPM2O94759 1503 aa22.98■■□□□ 1.27
TGFB1-202ENST00000597453 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
TGFB1-202ENST00000597453 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
TGFB1-202ENST00000597453 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
TGFB1-202ENST00000597453 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
TGFB1-202ENST00000597453 PTPRUQ92729 1446 aa22.94■■□□□ 1.26
TGFB1-202ENST00000597453 SLAIN2Q9P270 581 aa22.93■■□□□ 1.26
TGFB1-202ENST00000597453 KIF1BO60333 1816 aa22.93■■□□□ 1.26
TGFB1-202ENST00000597453 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.93■■□□□ 1.26
TGFB1-202ENST00000597453 NEXMIFQ5QGS0 1516 aa22.92■■□□□ 1.26
TGFB1-202ENST00000597453 NCOA3Q9Y6Q9 1424 aa22.92■■□□□ 1.26
TGFB1-202ENST00000597453 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
TGFB1-202ENST00000597453 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
TGFB1-202ENST00000597453 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
TGFB1-202ENST00000597453 AMOTL2Q9Y2J4 779 aa22.9■■□□□ 1.26
TGFB1-202ENST00000597453 C14orf37Q86TY3 774 aa22.88■■□□□ 1.25
TGFB1-202ENST00000597453 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
TGFB1-202ENST00000597453 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
TGFB1-202ENST00000597453 C19orf44Q9H6X5 657 aa22.85■■□□□ 1.25
TGFB1-202ENST00000597453 METP08581 1390 aa22.85■■□□□ 1.25
TGFB1-202ENST00000597453 COL16A1Q07092 1604 aaPredicted RBP22.85■■□□□ 1.25
TGFB1-202ENST00000597453 CADPS2Q86UW7 1296 aa22.82■■□□□ 1.24
TGFB1-202ENST00000597453 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
TGFB1-202ENST00000597453 ATF3P18847 181 aa22.81■■□□□ 1.24
TGFB1-202ENST00000597453 SETD1AO15047 1707 aaKnown RBP22.8■■□□□ 1.24
TGFB1-202ENST00000597453 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
TGFB1-202ENST00000597453 JCADQ9P266 1359 aa22.78■■□□□ 1.24
TGFB1-202ENST00000597453 PPLO60437 1756 aa22.78■■□□□ 1.24
TGFB1-202ENST00000597453 DCCP43146 1447 aa22.77■■□□□ 1.24
TGFB1-202ENST00000597453 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
TGFB1-202ENST00000597453 FOXD1Q16676 465 aa22.76■■□□□ 1.23
TGFB1-202ENST00000597453 MST1RQ04912 1400 aa22.74■■□□□ 1.23
TGFB1-202ENST00000597453 BRINP3Q76B58 766 aa22.73■■□□□ 1.23
TGFB1-202ENST00000597453 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
TGFB1-202ENST00000597453 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
TGFB1-202ENST00000597453 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
TGFB1-202ENST00000597453 POTEAQ6S8J7 498 aa22.72■■□□□ 1.23
TGFB1-202ENST00000597453 LRP6O75581 1613 aa22.71■■□□□ 1.23
TGFB1-202ENST00000597453 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
TGFB1-202ENST00000597453 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
TGFB1-202ENST00000597453 NHSL1Q5SYE7 1610 aa22.7■■□□□ 1.22
TGFB1-202ENST00000597453 PTCH1Q13635 1447 aa22.68■■□□□ 1.22
TGFB1-202ENST00000597453 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
TGFB1-202ENST00000597453 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
TGFB1-202ENST00000597453 CCDC144AA2RUR9 1427 aa22.66■■□□□ 1.22
TGFB1-202ENST00000597453 MPHOSPH9Q99550 1183 aa22.66■■□□□ 1.22
TGFB1-202ENST00000597453 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
TGFB1-202ENST00000597453 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
TGFB1-202ENST00000597453 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
TGFB1-202ENST00000597453 ADGRF5Q8IZF2 1346 aa22.61■■□□□ 1.21
TGFB1-202ENST00000597453 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
TGFB1-202ENST00000597453 DDX17Q92841 729 aaKnown RBP22.6■■□□□ 1.21
TGFB1-202ENST00000597453 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
TGFB1-202ENST00000597453 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
TGFB1-202ENST00000597453 MEX3CQ5U5Q3 659 aaKnown RBP22.58■■□□□ 1.21
TGFB1-202ENST00000597453 LAMC1P11047 1609 aa22.57■■□□□ 1.2
TGFB1-202ENST00000597453 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
TGFB1-202ENST00000597453 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
TGFB1-202ENST00000597453 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
TGFB1-202ENST00000597453 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
TGFB1-202ENST00000597453 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
TGFB1-202ENST00000597453 ORAI2Q96SN7 254 aa22.53■■□□□ 1.2
TGFB1-202ENST00000597453 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
TGFB1-202ENST00000597453 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
TGFB1-202ENST00000597453 KNDC1Q76NI1 1749 aa22.53■■□□□ 1.2
TGFB1-202ENST00000597453 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
TGFB1-202ENST00000597453 RAB3GAP2Q9H2M9 1393 aa22.51■■□□□ 1.19
TGFB1-202ENST00000597453 TECPR2O15040 1411 aa22.51■■□□□ 1.19
TGFB1-202ENST00000597453 ZNF772Q68DY9 489 aaPredicted RBP22.5■■□□□ 1.19
TGFB1-202ENST00000597453 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms