RNA–Protein interactions for RNA: ENST00000592484.5

LRP3-204, Transcript of LDL receptor related protein 3, humanhuman

TSL 4

Gene LRP3, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-204ENST00000592484 HDGFP51858 240 aaKnown RBP24.31■■□□□ 1.48
LRP3-204ENST00000592484 NWD1Q149M9 1564 aa24.31■■□□□ 1.48
LRP3-204ENST00000592484 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
LRP3-204ENST00000592484 NKTRP30414 1462 aaKnown RBP24.3■■□□□ 1.48
LRP3-204ENST00000592484 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
LRP3-204ENST00000592484 RIMS2Q9UQ26 1411 aa24.28■■□□□ 1.48
LRP3-204ENST00000592484 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
LRP3-204ENST00000592484 NUP155O75694 1391 aa24.27■■□□□ 1.48
LRP3-204ENST00000592484 ITGAEP38570 1179 aa24.26■■□□□ 1.47
LRP3-204ENST00000592484 BCANQ96GW7 911 aa24.25■■□□□ 1.47
LRP3-204ENST00000592484 PPP1R15AO75807 674 aaPredicted RBP24.24■■□□□ 1.47
LRP3-204ENST00000592484 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.24■■□□□ 1.47
LRP3-204ENST00000592484 PROSER2Q86WR7 435 aaPredicted RBP24.23■■□□□ 1.47
LRP3-204ENST00000592484 FAM135BQ49AJ0 1406 aa24.23■■□□□ 1.47
LRP3-204ENST00000592484 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
LRP3-204ENST00000592484 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
LRP3-204ENST00000592484 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
LRP3-204ENST00000592484 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
LRP3-204ENST00000592484 TBX22Q9Y458 520 aa24.19■■□□□ 1.46
LRP3-204ENST00000592484 DIP2AQ14689 1571 aa24.19■■□□□ 1.46
LRP3-204ENST00000592484 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
LRP3-204ENST00000592484 MSH6P52701 1360 aa24.16■■□□□ 1.46
LRP3-204ENST00000592484 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
LRP3-204ENST00000592484 ROBO1Q9Y6N7 1651 aa24.15■■□□□ 1.46
LRP3-204ENST00000592484 ADAMTS13Q76LX8 1427 aa24.14■■□□□ 1.45
LRP3-204ENST00000592484 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
LRP3-204ENST00000592484 PIK3R4Q99570 1358 aa24.14■■□□□ 1.45
LRP3-204ENST00000592484 NCOA3Q9Y6Q9 1424 aa24.13■■□□□ 1.45
LRP3-204ENST00000592484 RBM33Q96EV2 1170 aaKnown RBP24.13■■□□□ 1.45
LRP3-204ENST00000592484 NUTM2DQ5VT03 806 aaPredicted RBP24.09■■□□□ 1.45
LRP3-204ENST00000592484 TRPM2O94759 1503 aa24.09■■□□□ 1.45
LRP3-204ENST00000592484 NAIPQ13075 1403 aa24.08■■□□□ 1.44
LRP3-204ENST00000592484 SLAIN2Q9P270 581 aa24.06■■□□□ 1.44
LRP3-204ENST00000592484 SETBP1Q9Y6X0 1596 aa24.04■■□□□ 1.44
LRP3-204ENST00000592484 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
LRP3-204ENST00000592484 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
LRP3-204ENST00000592484 HFM1A2PYH4 1435 aa24.01■■□□□ 1.43
LRP3-204ENST00000592484 C14orf37Q86TY3 774 aa24■■□□□ 1.43
LRP3-204ENST00000592484 C19orf44Q9H6X5 657 aa24■■□□□ 1.43
LRP3-204ENST00000592484 PHLPP1O60346 1717 aa24■■□□□ 1.43
LRP3-204ENST00000592484 SIPA1L2Q9P2F8 1722 aaPredicted RBP24■■□□□ 1.43
LRP3-204ENST00000592484 ZNF326Q5BKZ1 582 aaKnown RBP23.99■■□□□ 1.43
LRP3-204ENST00000592484 CADPS2Q86UW7 1296 aa23.99■■□□□ 1.43
LRP3-204ENST00000592484 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
LRP3-204ENST00000592484 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
LRP3-204ENST00000592484 KIF1BO60333 1816 aa23.98■■□□□ 1.43
LRP3-204ENST00000592484 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
LRP3-204ENST00000592484 NEXMIFQ5QGS0 1516 aa23.97■■□□□ 1.43
LRP3-204ENST00000592484 ATF3P18847 181 aa23.95■■□□□ 1.42
LRP3-204ENST00000592484 DCCP43146 1447 aa23.94■■□□□ 1.42
LRP3-204ENST00000592484 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
LRP3-204ENST00000592484 JCADQ9P266 1359 aa23.93■■□□□ 1.42
LRP3-204ENST00000592484 COL16A1Q07092 1604 aaPredicted RBP23.93■■□□□ 1.42
LRP3-204ENST00000592484 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
LRP3-204ENST00000592484 AHDC1Q5TGY3 1603 aaPredicted RBP23.91■■□□□ 1.42
LRP3-204ENST00000592484 METP08581 1390 aa23.9■■□□□ 1.42
LRP3-204ENST00000592484 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
LRP3-204ENST00000592484 VGFO15240 615 aaPredicted RBP23.85■■□□□ 1.41
LRP3-204ENST00000592484 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
LRP3-204ENST00000592484 SPATA31A6Q5VVP1 1343 aa23.84■■□□□ 1.41
LRP3-204ENST00000592484 BRINP3Q76B58 766 aa23.83■■□□□ 1.41
LRP3-204ENST00000592484 ADGRL3Q9HAR2 1447 aa23.83■■□□□ 1.4
LRP3-204ENST00000592484 SHPRHQ149N8 1683 aa23.83■■□□□ 1.4
LRP3-204ENST00000592484 MST1RQ04912 1400 aa23.82■■□□□ 1.4
LRP3-204ENST00000592484 SETD1AO15047 1707 aaKnown RBP23.81■■□□□ 1.4
LRP3-204ENST00000592484 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
LRP3-204ENST00000592484 POTEAQ6S8J7 498 aa23.8■■□□□ 1.4
LRP3-204ENST00000592484 PPLO60437 1756 aa23.8■■□□□ 1.4
LRP3-204ENST00000592484 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
LRP3-204ENST00000592484 PTCH1Q13635 1447 aa23.79■■□□□ 1.4
LRP3-204ENST00000592484 PRAG1Q86YV5 1406 aa23.78■■□□□ 1.4
LRP3-204ENST00000592484 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
LRP3-204ENST00000592484 LRP6O75581 1613 aa23.76■■□□□ 1.39
LRP3-204ENST00000592484 CCDC144AA2RUR9 1427 aa23.74■■□□□ 1.39
LRP3-204ENST00000592484 SETD5Q9C0A6 1442 aa23.74■■□□□ 1.39
LRP3-204ENST00000592484 ACIN1Q9UKV3 1341 aaKnown RBP23.73■■□□□ 1.39
LRP3-204ENST00000592484 ROBO2Q9HCK4 1378 aa23.71■■□□□ 1.39
LRP3-204ENST00000592484 FOXD1Q16676 465 aa23.71■■□□□ 1.39
LRP3-204ENST00000592484 MEX3CQ5U5Q3 659 aaKnown RBP23.7■■□□□ 1.38
LRP3-204ENST00000592484 MPHOSPH9Q99550 1183 aa23.69■■□□□ 1.38
LRP3-204ENST00000592484 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
LRP3-204ENST00000592484 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
LRP3-204ENST00000592484 C1orf167Q5SNV9 1468 aa23.68■■□□□ 1.38
LRP3-204ENST00000592484 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
LRP3-204ENST00000592484 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
LRP3-204ENST00000592484 LAMC1P11047 1609 aa23.66■■□□□ 1.38
LRP3-204ENST00000592484 ANKRD30BQ9BXX2 1392 aa23.66■■□□□ 1.38
LRP3-204ENST00000592484 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
LRP3-204ENST00000592484 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
LRP3-204ENST00000592484 NUTM2BA6NNL0 878 aaPredicted RBP23.61■■□□□ 1.37
LRP3-204ENST00000592484 NUTM2EB1AL46 878 aaPredicted RBP23.61■■□□□ 1.37
LRP3-204ENST00000592484 NUTM2AQ8IVF1 878 aaPredicted RBP23.61■■□□□ 1.37
LRP3-204ENST00000592484 PNPLA6Q8IY17 1366 aa23.61■■□□□ 1.37
LRP3-204ENST00000592484 CDC42BPGQ6DT37 1551 aa23.61■■□□□ 1.37
LRP3-204ENST00000592484 TECPR2O15040 1411 aa23.6■■□□□ 1.37
LRP3-204ENST00000592484 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
LRP3-204ENST00000592484 PIK3C2GO75747 1445 aa23.59■■□□□ 1.37
LRP3-204ENST00000592484 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.37
LRP3-204ENST00000592484 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
LRP3-204ENST00000592484 SOS2Q07890 1332 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms