RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ANKRD50Q9ULJ7 1429 aa21.66■■□□□ 1.06
CLPTM1-208ENST00000588274 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
CLPTM1-208ENST00000588274 RBM33Q96EV2 1170 aaKnown RBP21.63■■□□□ 1.05
CLPTM1-208ENST00000588274 STAG3Q9UJ98 1225 aa21.63■■□□□ 1.05
CLPTM1-208ENST00000588274 PLEKHG1Q9ULL1 1385 aa21.62■■□□□ 1.05
CLPTM1-208ENST00000588274 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
CLPTM1-208ENST00000588274 CHD2O14647 1828 aaKnown RBP21.62■■□□□ 1.05
CLPTM1-208ENST00000588274 APLP2Q06481 763 aa21.6■■□□□ 1.05
CLPTM1-208ENST00000588274 E9PCH4 1651 aa21.6■■□□□ 1.05
CLPTM1-208ENST00000588274 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
CLPTM1-208ENST00000588274 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
CLPTM1-208ENST00000588274 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
CLPTM1-208ENST00000588274 COL16A1Q07092 1604 aaPredicted RBP21.57■■□□□ 1.04
CLPTM1-208ENST00000588274 IQGAP3Q86VI3 1631 aa21.56■■□□□ 1.04
CLPTM1-208ENST00000588274 POTEAQ6S8J7 498 aa21.55■■□□□ 1.04
CLPTM1-208ENST00000588274 PHLPP1O60346 1717 aa21.54■■□□□ 1.04
CLPTM1-208ENST00000588274 MSH6P52701 1360 aa21.53■■□□□ 1.04
CLPTM1-208ENST00000588274 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
CLPTM1-208ENST00000588274 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
CLPTM1-208ENST00000588274 ROCK1Q13464 1354 aa21.5■■□□□ 1.03
CLPTM1-208ENST00000588274 NCOA3Q9Y6Q9 1424 aa21.5■■□□□ 1.03
CLPTM1-208ENST00000588274 SLAIN2Q9P270 581 aa21.49■■□□□ 1.03
CLPTM1-208ENST00000588274 LRP6O75581 1613 aa21.48■■□□□ 1.03
CLPTM1-208ENST00000588274 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
CLPTM1-208ENST00000588274 SETD1AO15047 1707 aaKnown RBP21.48■■□□□ 1.03
CLPTM1-208ENST00000588274 AHDC1Q5TGY3 1603 aaPredicted RBP21.47■■□□□ 1.03
CLPTM1-208ENST00000588274 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.47■■□□□ 1.03
CLPTM1-208ENST00000588274 TBX22Q9Y458 520 aa21.47■■□□□ 1.03
CLPTM1-208ENST00000588274 JCADQ9P266 1359 aa21.46■■□□□ 1.03
CLPTM1-208ENST00000588274 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
CLPTM1-208ENST00000588274 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
CLPTM1-208ENST00000588274 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
CLPTM1-208ENST00000588274 TRPM2O94759 1503 aa21.43■■□□□ 1.02
CLPTM1-208ENST00000588274 PPP1R15AO75807 674 aaPredicted RBP21.42■■□□□ 1.02
CLPTM1-208ENST00000588274 SHPRHQ149N8 1683 aa21.42■■□□□ 1.02
CLPTM1-208ENST00000588274 SETBP1Q9Y6X0 1596 aa21.41■■□□□ 1.02
CLPTM1-208ENST00000588274 BCANQ96GW7 911 aa21.41■■□□□ 1.02
CLPTM1-208ENST00000588274 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.4■■□□□ 1.02
CLPTM1-208ENST00000588274 NUTM2DQ5VT03 806 aaPredicted RBP21.39■■□□□ 1.01
CLPTM1-208ENST00000588274 SPHKAPQ2M3C7 1700 aa21.38■■□□□ 1.01
CLPTM1-208ENST00000588274 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-208ENST00000588274 DCCP43146 1447 aa21.37■■□□□ 1.01
CLPTM1-208ENST00000588274 NUP155O75694 1391 aa21.36■■□□□ 1.01
CLPTM1-208ENST00000588274 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
CLPTM1-208ENST00000588274 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
CLPTM1-208ENST00000588274 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
CLPTM1-208ENST00000588274 SPATA31A6Q5VVP1 1343 aa21.33■■□□□ 1.01
CLPTM1-208ENST00000588274 CADPS2Q86UW7 1296 aa21.33■■□□□ 1.01
CLPTM1-208ENST00000588274 NHSL1Q5SYE7 1610 aa21.33■■□□□ 1
CLPTM1-208ENST00000588274 MST1RQ04912 1400 aa21.32■■□□□ 1
CLPTM1-208ENST00000588274 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
CLPTM1-208ENST00000588274 CLTCL1P53675 1640 aa21.31■■□□□ 1
CLPTM1-208ENST00000588274 BRINP3Q76B58 766 aa21.31■■□□□ 1
CLPTM1-208ENST00000588274 AMOTL2Q9Y2J4 779 aa21.31■■□□□ 1
CLPTM1-208ENST00000588274 METP08581 1390 aa21.3■■□□□ 1
CLPTM1-208ENST00000588274 NALCNQ8IZF0 1738 aa21.29■■□□□ 1
CLPTM1-208ENST00000588274 C14orf37Q86TY3 774 aa21.27■■□□□ 1
CLPTM1-208ENST00000588274 SETD5Q9C0A6 1442 aa21.27■■□□□ 1
CLPTM1-208ENST00000588274 ATF3P18847 181 aa21.26■□□□□ 0.99
CLPTM1-208ENST00000588274 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
CLPTM1-208ENST00000588274 LAMC1P11047 1609 aa21.22■□□□□ 0.99
CLPTM1-208ENST00000588274 PRAG1Q86YV5 1406 aa21.21■□□□□ 0.99
CLPTM1-208ENST00000588274 CDK12Q9NYV4 1490 aaPredicted RBP21.2■□□□□ 0.98
CLPTM1-208ENST00000588274 ITGAEP38570 1179 aa21.2■□□□□ 0.98
CLPTM1-208ENST00000588274 ZNF772Q68DY9 489 aaPredicted RBP21.2■□□□□ 0.98
CLPTM1-208ENST00000588274 NAIPQ13075 1403 aa21.19■□□□□ 0.98
CLPTM1-208ENST00000588274 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
CLPTM1-208ENST00000588274 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
CLPTM1-208ENST00000588274 PTCH1Q13635 1447 aa21.18■□□□□ 0.98
CLPTM1-208ENST00000588274 UPF1Q92900 1129 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLPTM1-208ENST00000588274 MEX3CQ5U5Q3 659 aaKnown RBP21.16■□□□□ 0.98
CLPTM1-208ENST00000588274 C1orf167Q5SNV9 1468 aa21.14■□□□□ 0.98
CLPTM1-208ENST00000588274 KIF1BO60333 1816 aa21.14■□□□□ 0.97
CLPTM1-208ENST00000588274 DDX17Q92841 729 aaKnown RBP21.14■□□□□ 0.97
CLPTM1-208ENST00000588274 AFF2P51816 1311 aa21.13■□□□□ 0.97
CLPTM1-208ENST00000588274 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
CLPTM1-208ENST00000588274 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
CLPTM1-208ENST00000588274 RGS12O14924 1447 aa21.12■□□□□ 0.97
CLPTM1-208ENST00000588274 ROBO2Q9HCK4 1378 aa21.12■□□□□ 0.97
CLPTM1-208ENST00000588274 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
CLPTM1-208ENST00000588274 NUTM2BA6NNL0 878 aaPredicted RBP21.11■□□□□ 0.97
CLPTM1-208ENST00000588274 NUTM2EB1AL46 878 aaPredicted RBP21.11■□□□□ 0.97
CLPTM1-208ENST00000588274 NUTM2AQ8IVF1 878 aaPredicted RBP21.11■□□□□ 0.97
CLPTM1-208ENST00000588274 RXRBP28702 533 aa21.09■□□□□ 0.97
CLPTM1-208ENST00000588274 PPLO60437 1756 aa21.09■□□□□ 0.97
CLPTM1-208ENST00000588274 HFM1A2PYH4 1435 aa21.08■□□□□ 0.97
CLPTM1-208ENST00000588274 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
CLPTM1-208ENST00000588274 COL22A1Q8NFW1 1626 aaPredicted RBP21.07■□□□□ 0.96
CLPTM1-208ENST00000588274 CDC42BPGQ6DT37 1551 aa21.05■□□□□ 0.96
CLPTM1-208ENST00000588274 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
CLPTM1-208ENST00000588274 SRCAPQ6ZRS2 3230 aa21.04■□□□□ 0.96
CLPTM1-208ENST00000588274 C8orf37Q96NL8 207 aa21.02■□□□□ 0.96
CLPTM1-208ENST00000588274 ORAI2Q96SN7 254 aa21.02■□□□□ 0.96
CLPTM1-208ENST00000588274 MYOM2P54296 1465 aa21.01■□□□□ 0.95
CLPTM1-208ENST00000588274 EP400Q96L91 3159 aa21■□□□□ 0.95
CLPTM1-208ENST00000588274 PXDNQ92626 1479 aa21■□□□□ 0.95
CLPTM1-208ENST00000588274 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
CLPTM1-208ENST00000588274 TECPR2O15040 1411 aa20.98■□□□□ 0.95
CLPTM1-208ENST00000588274 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
CLPTM1-208ENST00000588274 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms