RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 L1TD1Q5T7N2 865 aaKnown RBP21.75■■□□□ 1.07
PTBP1-210ENST00000586944 CSB-PGBD3P0DP91 1061 aa21.74■■□□□ 1.07
PTBP1-210ENST00000586944 ZRSR1Q15695 479 aaKnown RBP21.74■■□□□ 1.07
PTBP1-210ENST00000586944 CFAP44Q96MT7 982 aa21.74■■□□□ 1.07
PTBP1-210ENST00000586944 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
PTBP1-210ENST00000586944 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
PTBP1-210ENST00000586944 ANKRD30BQ9BXX2 1392 aa21.74■■□□□ 1.07
PTBP1-210ENST00000586944 TRIM6-TRIM34B2RNG4 842 aa21.73■■□□□ 1.07
PTBP1-210ENST00000586944 GBP4Q96PP9 640 aa21.73■■□□□ 1.07
PTBP1-210ENST00000586944 FAM69CQ0P6D2 419 aa21.72■■□□□ 1.07
PTBP1-210ENST00000586944 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
PTBP1-210ENST00000586944 HMMRO75330 724 aa21.72■■□□□ 1.07
PTBP1-210ENST00000586944 HMOX1P09601 288 aa21.72■■□□□ 1.07
PTBP1-210ENST00000586944 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
PTBP1-210ENST00000586944 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
PTBP1-210ENST00000586944 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
PTBP1-210ENST00000586944 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
PTBP1-210ENST00000586944 NGEFQ8N5V2 710 aa21.71■■□□□ 1.07
PTBP1-210ENST00000586944 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
PTBP1-210ENST00000586944 ABCC5O15440 1437 aa21.7■■□□□ 1.06
PTBP1-210ENST00000586944 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
PTBP1-210ENST00000586944 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
PTBP1-210ENST00000586944 ROCK1Q13464 1354 aa21.7■■□□□ 1.06
PTBP1-210ENST00000586944 NOL8Q76FK4 1167 aaKnown RBP21.69■■□□□ 1.06
PTBP1-210ENST00000586944 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
PTBP1-210ENST00000586944 GOLGA6L4A6NEF3 574 aa21.68■■□□□ 1.06
PTBP1-210ENST00000586944 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
PTBP1-210ENST00000586944 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
PTBP1-210ENST00000586944 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
PTBP1-210ENST00000586944 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
PTBP1-210ENST00000586944 BCAR3O75815 825 aa21.63■■□□□ 1.05
PTBP1-210ENST00000586944 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
PTBP1-210ENST00000586944 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
PTBP1-210ENST00000586944 CUL7Q14999 1698 aa21.62■■□□□ 1.05
PTBP1-210ENST00000586944 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
PTBP1-210ENST00000586944 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
PTBP1-210ENST00000586944 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
PTBP1-210ENST00000586944 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
PTBP1-210ENST00000586944 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
PTBP1-210ENST00000586944 CAMSAP2Q08AD1 1489 aa21.59■■□□□ 1.05
PTBP1-210ENST00000586944 GOLGA6L3A6NEY3 463 aa21.59■■□□□ 1.05
PTBP1-210ENST00000586944 FOXD4L5Q5VV16 416 aaPredicted RBP21.59■■□□□ 1.05
PTBP1-210ENST00000586944 FOXD4L4Q8WXT5 416 aaPredicted RBP21.59■■□□□ 1.05
PTBP1-210ENST00000586944 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
PTBP1-210ENST00000586944 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.05
PTBP1-210ENST00000586944 PRAM1Q96QH2 718 aa21.58■■□□□ 1.04
PTBP1-210ENST00000586944 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
PTBP1-210ENST00000586944 CHMP3Q9Y3E7 222 aa21.58■■□□□ 1.04
PTBP1-210ENST00000586944 NPHP1O15259 732 aa21.57■■□□□ 1.04
PTBP1-210ENST00000586944 RILPL2Q969X0 211 aa21.57■■□□□ 1.04
PTBP1-210ENST00000586944 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
PTBP1-210ENST00000586944 MSNP26038 577 aaKnown RBP21.56■■□□□ 1.04
PTBP1-210ENST00000586944 CHMP4AQ9BY43 222 aa21.56■■□□□ 1.04
PTBP1-210ENST00000586944 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
PTBP1-210ENST00000586944 EIF2S2P20042 333 aaKnown RBP21.55■■□□□ 1.04
PTBP1-210ENST00000586944 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
PTBP1-210ENST00000586944 GSE1Q14687 1217 aa21.55■■□□□ 1.04
PTBP1-210ENST00000586944 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
PTBP1-210ENST00000586944 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
PTBP1-210ENST00000586944 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
PTBP1-210ENST00000586944 API5Q9BZZ5 524 aaKnown RBP21.53■■□□□ 1.04
PTBP1-210ENST00000586944 KIF16BQ96L93 1317 aa21.53■■□□□ 1.04
PTBP1-210ENST00000586944 GNAI1P63096 354 aa21.52■■□□□ 1.04
PTBP1-210ENST00000586944 ST18O60284 1047 aa21.52■■□□□ 1.04
PTBP1-210ENST00000586944 PRKAR2BP31323 418 aa21.52■■□□□ 1.04
PTBP1-210ENST00000586944 TEFQ10587 303 aa21.51■■□□□ 1.03
PTBP1-210ENST00000586944 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
PTBP1-210ENST00000586944 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
PTBP1-210ENST00000586944 RPRD2Q5VT52 1461 aaKnown RBP21.5■■□□□ 1.03
PTBP1-210ENST00000586944 CABP1Q9NZU7 370 aa21.49■■□□□ 1.03
PTBP1-210ENST00000586944 FOXD4L6Q3SYB3 417 aaPredicted RBP21.49■■□□□ 1.03
PTBP1-210ENST00000586944 FOXD4L3Q6VB84 417 aaPredicted RBP21.49■■□□□ 1.03
PTBP1-210ENST00000586944 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
PTBP1-210ENST00000586944 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
PTBP1-210ENST00000586944 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
PTBP1-210ENST00000586944 PTMSP20962 102 aa21.47■■□□□ 1.03
PTBP1-210ENST00000586944 TXNDC2Q86VQ3 553 aa21.47■■□□□ 1.03
PTBP1-210ENST00000586944 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
PTBP1-210ENST00000586944 HDAC5Q9UQL6 1122 aa21.47■■□□□ 1.03
PTBP1-210ENST00000586944 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
PTBP1-210ENST00000586944 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
PTBP1-210ENST00000586944 GORABQ5T7V8 394 aa21.46■■□□□ 1.03
PTBP1-210ENST00000586944 BACH2Q9BYV9 841 aa21.46■■□□□ 1.03
PTBP1-210ENST00000586944 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
PTBP1-210ENST00000586944 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
PTBP1-210ENST00000586944 PDE3AQ14432 1141 aa21.45■■□□□ 1.02
PTBP1-210ENST00000586944 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
PTBP1-210ENST00000586944 PDZRN3Q9UPQ7 1066 aa21.45■■□□□ 1.02
PTBP1-210ENST00000586944 NFKBIBQ15653 356 aa21.45■■□□□ 1.02
PTBP1-210ENST00000586944 CDK19Q9BWU1 502 aa21.44■■□□□ 1.02
PTBP1-210ENST00000586944 DRC7Q8IY82 874 aa21.44■■□□□ 1.02
PTBP1-210ENST00000586944 DDX49Q9Y6V7 483 aaKnown RBP21.44■■□□□ 1.02
PTBP1-210ENST00000586944 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
PTBP1-210ENST00000586944 C20orf194Q5TEA3 1177 aa21.42■■□□□ 1.02
PTBP1-210ENST00000586944 NLRP6P59044 892 aa21.42■■□□□ 1.02
PTBP1-210ENST00000586944 C1orf115Q9H7X2 142 aa21.42■■□□□ 1.02
PTBP1-210ENST00000586944 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
PTBP1-210ENST00000586944 PSME1Q06323 249 aa21.41■■□□□ 1.02
PTBP1-210ENST00000586944 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
PTBP1-210ENST00000586944 TAF7LQ5H9L4 462 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms