RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 RIMS2Q9UQ26 1411 aa16.97■□□□□ 0.31
PPP4R1-218ENST00000580745 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
PPP4R1-218ENST00000580745 TET3O43151 1660 aa16.97■□□□□ 0.31
PPP4R1-218ENST00000580745 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
PPP4R1-218ENST00000580745 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
PPP4R1-218ENST00000580745 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
PPP4R1-218ENST00000580745 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
PPP4R1-218ENST00000580745 SOCS7O14512 581 aa16.91■□□□□ 0.3
PPP4R1-218ENST00000580745 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
PPP4R1-218ENST00000580745 E9PCH4 1651 aa16.91■□□□□ 0.3
PPP4R1-218ENST00000580745 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
PPP4R1-218ENST00000580745 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
PPP4R1-218ENST00000580745 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPP4R1-218ENST00000580745 NAIPQ13075 1403 aa16.88■□□□□ 0.29
PPP4R1-218ENST00000580745 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
PPP4R1-218ENST00000580745 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
PPP4R1-218ENST00000580745 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
PPP4R1-218ENST00000580745 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
PPP4R1-218ENST00000580745 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-218ENST00000580745 MSH6P52701 1360 aa16.82■□□□□ 0.28
PPP4R1-218ENST00000580745 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
PPP4R1-218ENST00000580745 PTPRUQ92729 1446 aa16.81■□□□□ 0.28
PPP4R1-218ENST00000580745 SLAIN2Q9P270 581 aa16.81■□□□□ 0.28
PPP4R1-218ENST00000580745 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
PPP4R1-218ENST00000580745 MYO5BQ9ULV0 1848 aa16.81■□□□□ 0.28
PPP4R1-218ENST00000580745 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
PPP4R1-218ENST00000580745 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
PPP4R1-218ENST00000580745 FOXD1Q16676 465 aa16.78■□□□□ 0.28
PPP4R1-218ENST00000580745 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-218ENST00000580745 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
PPP4R1-218ENST00000580745 METP08581 1390 aa16.77■□□□□ 0.27
PPP4R1-218ENST00000580745 PIK3R4Q99570 1358 aa16.76■□□□□ 0.27
PPP4R1-218ENST00000580745 CLTCL1P53675 1640 aa16.74■□□□□ 0.27
PPP4R1-218ENST00000580745 C19orf44Q9H6X5 657 aa16.74■□□□□ 0.27
PPP4R1-218ENST00000580745 ROBO1Q9Y6N7 1651 aa16.73■□□□□ 0.27
PPP4R1-218ENST00000580745 TRPM2O94759 1503 aa16.73■□□□□ 0.27
PPP4R1-218ENST00000580745 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
PPP4R1-218ENST00000580745 ATF3P18847 181 aa16.72■□□□□ 0.27
PPP4R1-218ENST00000580745 SPHKAPQ2M3C7 1700 aa16.72■□□□□ 0.27
PPP4R1-218ENST00000580745 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
PPP4R1-218ENST00000580745 CHD2O14647 1828 aaKnown RBP16.71■□□□□ 0.27
PPP4R1-218ENST00000580745 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
PPP4R1-218ENST00000580745 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
PPP4R1-218ENST00000580745 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
PPP4R1-218ENST00000580745 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
PPP4R1-218ENST00000580745 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
PPP4R1-218ENST00000580745 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
PPP4R1-218ENST00000580745 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
PPP4R1-218ENST00000580745 JCADQ9P266 1359 aa16.65■□□□□ 0.26
PPP4R1-218ENST00000580745 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
PPP4R1-218ENST00000580745 RGL3Q3MIN7 710 aa16.65■□□□□ 0.26
PPP4R1-218ENST00000580745 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
PPP4R1-218ENST00000580745 XRN1Q8IZH2 1706 aaKnown RBP16.63■□□□□ 0.25
PPP4R1-218ENST00000580745 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.63■□□□□ 0.25
PPP4R1-218ENST00000580745 ROBO2Q9HCK4 1378 aa16.63■□□□□ 0.25
PPP4R1-218ENST00000580745 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
PPP4R1-218ENST00000580745 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
PPP4R1-218ENST00000580745 MST1RQ04912 1400 aa16.62■□□□□ 0.25
PPP4R1-218ENST00000580745 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
PPP4R1-218ENST00000580745 PHLPP1O60346 1717 aa16.6■□□□□ 0.25
PPP4R1-218ENST00000580745 DCCP43146 1447 aa16.6■□□□□ 0.25
PPP4R1-218ENST00000580745 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
PPP4R1-218ENST00000580745 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
PPP4R1-218ENST00000580745 LRP6O75581 1613 aa16.59■□□□□ 0.25
PPP4R1-218ENST00000580745 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 ASXL1Q8IXJ9 1541 aa16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-218ENST00000580745 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
PPP4R1-218ENST00000580745 STK26Q9P289 416 aa16.56■□□□□ 0.24
PPP4R1-218ENST00000580745 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
PPP4R1-218ENST00000580745 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
PPP4R1-218ENST00000580745 MEX3CQ5U5Q3 659 aaKnown RBP16.55■□□□□ 0.24
PPP4R1-218ENST00000580745 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
PPP4R1-218ENST00000580745 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
PPP4R1-218ENST00000580745 KIF1BO60333 1816 aa16.54■□□□□ 0.24
PPP4R1-218ENST00000580745 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
PPP4R1-218ENST00000580745 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
PPP4R1-218ENST00000580745 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
PPP4R1-218ENST00000580745 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
PPP4R1-218ENST00000580745 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
PPP4R1-218ENST00000580745 LRRC59Q96AG4 307 aaKnown RBP16.5■□□□□ 0.23
PPP4R1-218ENST00000580745 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
PPP4R1-218ENST00000580745 ANKRD30BQ9BXX2 1392 aa16.5■□□□□ 0.23
PPP4R1-218ENST00000580745 NUTM2FA1L443 756 aa16.49■□□□□ 0.23
PPP4R1-218ENST00000580745 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
PPP4R1-218ENST00000580745 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
PPP4R1-218ENST00000580745 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
PPP4R1-218ENST00000580745 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
PPP4R1-218ENST00000580745 PPLO60437 1756 aa16.47■□□□□ 0.23
PPP4R1-218ENST00000580745 CFAP70Q5T0N1 1121 aa16.47■□□□□ 0.23
PPP4R1-218ENST00000580745 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
PPP4R1-218ENST00000580745 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms