RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 SLC52A1Q9NWF4 448 aa26.53■■□□□ 1.84
ABR-236ENST00000577052 RPRD2Q5VT52 1461 aaKnown RBP26.52■■□□□ 1.84
ABR-236ENST00000577052 PROSER2Q86WR7 435 aaPredicted RBP26.52■■□□□ 1.84
ABR-236ENST00000577052 ROBO1Q9Y6N7 1651 aa26.52■■□□□ 1.84
ABR-236ENST00000577052 GCC2Q8IWJ2 1684 aa26.5■■□□□ 1.83
ABR-236ENST00000577052 NKTRP30414 1462 aaKnown RBP26.49■■□□□ 1.83
ABR-236ENST00000577052 TMEM131LA2VDJ0 1609 aa26.49■■□□□ 1.83
ABR-236ENST00000577052 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
ABR-236ENST00000577052 UNC13BO14795 1591 aa26.46■■□□□ 1.83
ABR-236ENST00000577052 PLEKHG1Q9ULL1 1385 aa26.46■■□□□ 1.83
ABR-236ENST00000577052 RIMS2Q9UQ26 1411 aa26.45■■□□□ 1.82
ABR-236ENST00000577052 E9PCH4 1651 aa26.44■■□□□ 1.82
ABR-236ENST00000577052 POTEAQ6S8J7 498 aa26.41■■□□□ 1.82
ABR-236ENST00000577052 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
ABR-236ENST00000577052 BCANQ96GW7 911 aa26.4■■□□□ 1.82
ABR-236ENST00000577052 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.81
ABR-236ENST00000577052 MSH6P52701 1360 aa26.37■■□□□ 1.81
ABR-236ENST00000577052 SLAIN2Q9P270 581 aa26.37■■□□□ 1.81
ABR-236ENST00000577052 NUTM2DQ5VT03 806 aaPredicted RBP26.36■■□□□ 1.81
ABR-236ENST00000577052 TBX22Q9Y458 520 aa26.35■■□□□ 1.81
ABR-236ENST00000577052 IQGAP3Q86VI3 1631 aa26.35■■□□□ 1.81
ABR-236ENST00000577052 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
ABR-236ENST00000577052 ROCK1Q13464 1354 aa26.33■■□□□ 1.81
ABR-236ENST00000577052 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.81
ABR-236ENST00000577052 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
ABR-236ENST00000577052 COL16A1Q07092 1604 aaPredicted RBP26.31■■□□□ 1.8
ABR-236ENST00000577052 HDGFP51858 240 aaKnown RBP26.28■■□□□ 1.8
ABR-236ENST00000577052 PTPRUQ92729 1446 aa26.28■■□□□ 1.8
ABR-236ENST00000577052 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
ABR-236ENST00000577052 NCOA3Q9Y6Q9 1424 aa26.27■■□□□ 1.8
ABR-236ENST00000577052 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.27■■□□□ 1.8
ABR-236ENST00000577052 DIP2AQ14689 1571 aa26.26■■□□□ 1.79
ABR-236ENST00000577052 NUP155O75694 1391 aa26.25■■□□□ 1.79
ABR-236ENST00000577052 JCADQ9P266 1359 aa26.25■■□□□ 1.79
ABR-236ENST00000577052 NRXN3Q9Y4C0 1643 aa26.24■■□□□ 1.79
ABR-236ENST00000577052 LRP6O75581 1613 aa26.23■■□□□ 1.79
ABR-236ENST00000577052 PIK3R4Q99570 1358 aa26.21■■□□□ 1.79
ABR-236ENST00000577052 SETD1AO15047 1707 aaKnown RBP26.21■■□□□ 1.79
ABR-236ENST00000577052 ITGAEP38570 1179 aa26.2■■□□□ 1.78
ABR-236ENST00000577052 AHDC1Q5TGY3 1603 aaPredicted RBP26.19■■□□□ 1.78
ABR-236ENST00000577052 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
ABR-236ENST00000577052 TRPM2O94759 1503 aa26.19■■□□□ 1.78
ABR-236ENST00000577052 C19orf44Q9H6X5 657 aa26.18■■□□□ 1.78
ABR-236ENST00000577052 C14orf37Q86TY3 774 aa26.16■■□□□ 1.78
ABR-236ENST00000577052 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
ABR-236ENST00000577052 XRN1Q8IZH2 1706 aaKnown RBP26.16■■□□□ 1.78
ABR-236ENST00000577052 CADPS2Q86UW7 1296 aa26.15■■□□□ 1.78
ABR-236ENST00000577052 SETBP1Q9Y6X0 1596 aa26.14■■□□□ 1.78
ABR-236ENST00000577052 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
ABR-236ENST00000577052 BRINP3Q76B58 766 aa26.12■■□□□ 1.77
ABR-236ENST00000577052 METP08581 1390 aa26.11■■□□□ 1.77
ABR-236ENST00000577052 ATF3P18847 181 aa26.11■■□□□ 1.77
ABR-236ENST00000577052 SPATA31A6Q5VVP1 1343 aa26.1■■□□□ 1.77
ABR-236ENST00000577052 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
ABR-236ENST00000577052 MST1RQ04912 1400 aa26.06■■□□□ 1.76
ABR-236ENST00000577052 NEXMIFQ5QGS0 1516 aa26.06■■□□□ 1.76
ABR-236ENST00000577052 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
ABR-236ENST00000577052 DCCP43146 1447 aa26.05■■□□□ 1.76
ABR-236ENST00000577052 ASXL1Q8IXJ9 1541 aa26.05■■□□□ 1.76
ABR-236ENST00000577052 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
ABR-236ENST00000577052 ZNF326Q5BKZ1 582 aaKnown RBP26.02■■□□□ 1.76
ABR-236ENST00000577052 NHSL1Q5SYE7 1610 aa26.02■■□□□ 1.76
ABR-236ENST00000577052 NALCNQ8IZF0 1738 aa26■■□□□ 1.75
ABR-236ENST00000577052 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
ABR-236ENST00000577052 MEX3CQ5U5Q3 659 aaKnown RBP25.99■■□□□ 1.75
ABR-236ENST00000577052 DDX17Q92841 729 aaKnown RBP25.99■■□□□ 1.75
ABR-236ENST00000577052 NAIPQ13075 1403 aa25.98■■□□□ 1.75
ABR-236ENST00000577052 ADGRL3Q9HAR2 1447 aa25.97■■□□□ 1.75
ABR-236ENST00000577052 ZNF772Q68DY9 489 aaPredicted RBP25.97■■□□□ 1.75
ABR-236ENST00000577052 NUTM2BA6NNL0 878 aaPredicted RBP25.96■■□□□ 1.75
ABR-236ENST00000577052 NUTM2EB1AL46 878 aaPredicted RBP25.96■■□□□ 1.75
ABR-236ENST00000577052 NUTM2AQ8IVF1 878 aaPredicted RBP25.96■■□□□ 1.75
ABR-236ENST00000577052 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
ABR-236ENST00000577052 KIF1BO60333 1816 aa25.94■■□□□ 1.74
ABR-236ENST00000577052 UPF1Q92900 1129 aaKnown RBP eCLIP25.93■■□□□ 1.74
ABR-236ENST00000577052 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
ABR-236ENST00000577052 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
ABR-236ENST00000577052 AFF2P51816 1311 aa25.89■■□□□ 1.74
ABR-236ENST00000577052 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
ABR-236ENST00000577052 ROBO2Q9HCK4 1378 aa25.88■■□□□ 1.73
ABR-236ENST00000577052 RXRBP28702 533 aa25.87■■□□□ 1.73
ABR-236ENST00000577052 LRRC59Q96AG4 307 aaKnown RBP25.87■■□□□ 1.73
ABR-236ENST00000577052 LAMC1P11047 1609 aa25.86■■□□□ 1.73
ABR-236ENST00000577052 PTCH1Q13635 1447 aa25.86■■□□□ 1.73
ABR-236ENST00000577052 CDK12Q9NYV4 1490 aaPredicted RBP25.85■■□□□ 1.73
ABR-236ENST00000577052 PRAG1Q86YV5 1406 aa25.83■■□□□ 1.73
ABR-236ENST00000577052 HFM1A2PYH4 1435 aa25.82■■□□□ 1.72
ABR-236ENST00000577052 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
ABR-236ENST00000577052 PPLO60437 1756 aa25.82■■□□□ 1.72
ABR-236ENST00000577052 C8orf37Q96NL8 207 aa25.8■■□□□ 1.72
ABR-236ENST00000577052 VGFO15240 615 aaPredicted RBP25.79■■□□□ 1.72
ABR-236ENST00000577052 RGS12O14924 1447 aa25.79■■□□□ 1.72
ABR-236ENST00000577052 SOS2Q07890 1332 aaPredicted RBP25.78■■□□□ 1.72
ABR-236ENST00000577052 QTRT2Q9H974 415 aaKnown RBP25.76■■□□□ 1.71
ABR-236ENST00000577052 RPGRIP1LQ68CZ1 1315 aa25.76■■□□□ 1.71
ABR-236ENST00000577052 FOXD1Q16676 465 aa25.75■■□□□ 1.71
ABR-236ENST00000577052 SLC4A1APQ9BWU0 796 aaKnown RBP25.74■■□□□ 1.71
ABR-236ENST00000577052 ADAMTS2O95450 1211 aa25.73■■□□□ 1.71
ABR-236ENST00000577052 RBM6P78332 1123 aaKnown RBP25.71■■□□□ 1.71
ABR-236ENST00000577052 ADGRF5Q8IZF2 1346 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms