RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
POLR2A-204ENST00000575547 SYNMO15061 1565 aa9.97□□□□□ -0.81
POLR2A-204ENST00000575547 TBX22Q9Y458 520 aa9.97□□□□□ -0.81
POLR2A-204ENST00000575547 ROCK1Q13464 1354 aa9.97□□□□□ -0.81
POLR2A-204ENST00000575547 RIMS2Q9UQ26 1411 aa9.97□□□□□ -0.81
POLR2A-204ENST00000575547 SLAIN2Q9P270 581 aa9.96□□□□□ -0.82
POLR2A-204ENST00000575547 MED1Q15648 1581 aaPredicted RBP9.96□□□□□ -0.82
POLR2A-204ENST00000575547 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
POLR2A-204ENST00000575547 KDM5AP29375 1690 aaKnown RBP9.96□□□□□ -0.82
POLR2A-204ENST00000575547 ZNF326Q5BKZ1 582 aaKnown RBP9.95□□□□□ -0.82
POLR2A-204ENST00000575547 MSH6P52701 1360 aa9.95□□□□□ -0.82
POLR2A-204ENST00000575547 PLEKHG1Q9ULL1 1385 aa9.95□□□□□ -0.82
POLR2A-204ENST00000575547 FAM135BQ49AJ0 1406 aa9.95□□□□□ -0.82
POLR2A-204ENST00000575547 ADGRB3O60242 1522 aa9.95□□□□□ -0.82
POLR2A-204ENST00000575547 TET3O43151 1660 aa9.95□□□□□ -0.82
POLR2A-204ENST00000575547 ATF3P18847 181 aa9.93□□□□□ -0.82
POLR2A-204ENST00000575547 ZFYVE9O95405 1425 aa9.92□□□□□ -0.82
POLR2A-204ENST00000575547 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
POLR2A-204ENST00000575547 AMOTL2Q9Y2J4 779 aa9.92□□□□□ -0.82
POLR2A-204ENST00000575547 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
POLR2A-204ENST00000575547 C19orf44Q9H6X5 657 aa9.91□□□□□ -0.82
POLR2A-204ENST00000575547 XIRP1Q702N8 1843 aaKnown RBP9.91□□□□□ -0.82
POLR2A-204ENST00000575547 GCC2Q8IWJ2 1684 aa9.9□□□□□ -0.82
POLR2A-204ENST00000575547 TMEM131LA2VDJ0 1609 aa9.9□□□□□ -0.82
POLR2A-204ENST00000575547 RGS17Q9UGC6 210 aaPredicted RBP9.9□□□□□ -0.82
POLR2A-204ENST00000575547 MYO5BQ9ULV0 1848 aa9.9□□□□□ -0.82
POLR2A-204ENST00000575547 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
POLR2A-204ENST00000575547 UNC13BO14795 1591 aa9.89□□□□□ -0.83
POLR2A-204ENST00000575547 E9PCH4 1651 aa9.89□□□□□ -0.83
POLR2A-204ENST00000575547 NCOA3Q9Y6Q9 1424 aa9.88□□□□□ -0.83
POLR2A-204ENST00000575547 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
POLR2A-204ENST00000575547 CHD2O14647 1828 aaKnown RBP9.87□□□□□ -0.83
POLR2A-204ENST00000575547 IQGAP3Q86VI3 1631 aa9.87□□□□□ -0.83
POLR2A-204ENST00000575547 MEX3CQ5U5Q3 659 aaKnown RBP9.87□□□□□ -0.83
POLR2A-204ENST00000575547 ADAMTS13Q76LX8 1427 aa9.87□□□□□ -0.83
POLR2A-204ENST00000575547 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
POLR2A-204ENST00000575547 NWD1Q149M9 1564 aa9.86□□□□□ -0.83
POLR2A-204ENST00000575547 POTEAQ6S8J7 498 aa9.86□□□□□ -0.83
POLR2A-204ENST00000575547 JCADQ9P266 1359 aa9.86□□□□□ -0.83
POLR2A-204ENST00000575547 VGFO15240 615 aaPredicted RBP9.85□□□□□ -0.83
POLR2A-204ENST00000575547 SLC4A1APQ9BWU0 796 aaKnown RBP9.85□□□□□ -0.83
POLR2A-204ENST00000575547 RRBP1Q9P2E9 1410 aaKnown RBP9.83□□□□□ -0.84
POLR2A-204ENST00000575547 TRPM2O94759 1503 aa9.83□□□□□ -0.84
POLR2A-204ENST00000575547 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
POLR2A-204ENST00000575547 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
POLR2A-204ENST00000575547 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
POLR2A-204ENST00000575547 NAIPQ13075 1403 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 PTPRUQ92729 1446 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 BRINP3Q76B58 766 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 METP08581 1390 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 DIP2AQ14689 1571 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
POLR2A-204ENST00000575547 RPGRIP1LQ68CZ1 1315 aa9.81□□□□□ -0.84
POLR2A-204ENST00000575547 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
POLR2A-204ENST00000575547 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.8□□□□□ -0.84
POLR2A-204ENST00000575547 FOXD1Q16676 465 aa9.8□□□□□ -0.84
POLR2A-204ENST00000575547 ZNF772Q68DY9 489 aaPredicted RBP9.8□□□□□ -0.84
POLR2A-204ENST00000575547 LRRC59Q96AG4 307 aaKnown RBP9.8□□□□□ -0.84
POLR2A-204ENST00000575547 RGL3Q3MIN7 710 aa9.79□□□□□ -0.84
POLR2A-204ENST00000575547 SETBP1Q9Y6X0 1596 aa9.77□□□□□ -0.85
POLR2A-204ENST00000575547 HFM1A2PYH4 1435 aa9.77□□□□□ -0.85
POLR2A-204ENST00000575547 RXRBP28702 533 aa9.77□□□□□ -0.85
POLR2A-204ENST00000575547 DDX17Q92841 729 aaKnown RBP9.77□□□□□ -0.85
POLR2A-204ENST00000575547 MPHOSPH9Q99550 1183 aa9.77□□□□□ -0.85
POLR2A-204ENST00000575547 KIF1BO60333 1816 aa9.77□□□□□ -0.85
POLR2A-204ENST00000575547 DCCP43146 1447 aa9.76□□□□□ -0.85
POLR2A-204ENST00000575547 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
POLR2A-204ENST00000575547 STK26Q9P289 416 aa9.76□□□□□ -0.85
POLR2A-204ENST00000575547 C8orf37Q96NL8 207 aa9.75□□□□□ -0.85
POLR2A-204ENST00000575547 NEXMIFQ5QGS0 1516 aa9.75□□□□□ -0.85
POLR2A-204ENST00000575547 COL16A1Q07092 1604 aaPredicted RBP9.74□□□□□ -0.85
POLR2A-204ENST00000575547 NRXN3Q9Y4C0 1643 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 MST1RQ04912 1400 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 ADAMTS2O95450 1211 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 ORAI2Q96SN7 254 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 QTRT2Q9H974 415 aaKnown RBP9.74□□□□□ -0.85
POLR2A-204ENST00000575547 AFF2P51816 1311 aa9.74□□□□□ -0.85
POLR2A-204ENST00000575547 AHDC1Q5TGY3 1603 aaPredicted RBP9.74□□□□□ -0.85
POLR2A-204ENST00000575547 ADGRL3Q9HAR2 1447 aa9.73□□□□□ -0.85
POLR2A-204ENST00000575547 ESCO1Q5FWF5 840 aa9.73□□□□□ -0.85
POLR2A-204ENST00000575547 ADGRF5Q8IZF2 1346 aa9.73□□□□□ -0.85
POLR2A-204ENST00000575547 ACIN1Q9UKV3 1341 aaKnown RBP9.73□□□□□ -0.85
POLR2A-204ENST00000575547 ROBO2Q9HCK4 1378 aa9.73□□□□□ -0.85
POLR2A-204ENST00000575547 XRN1Q8IZH2 1706 aaKnown RBP9.73□□□□□ -0.85
POLR2A-204ENST00000575547 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
POLR2A-204ENST00000575547 ASXL1Q8IXJ9 1541 aa9.72□□□□□ -0.85
POLR2A-204ENST00000575547 LRP6O75581 1613 aa9.72□□□□□ -0.85
POLR2A-204ENST00000575547 TMEM132EQ6IEE7 984 aa9.72□□□□□ -0.85
POLR2A-204ENST00000575547 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
POLR2A-204ENST00000575547 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
POLR2A-204ENST00000575547 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
POLR2A-204ENST00000575547 WAPLQ7Z5K2 1190 aa9.71□□□□□ -0.86
POLR2A-204ENST00000575547 ANKRD30BQ9BXX2 1392 aa9.7□□□□□ -0.86
POLR2A-204ENST00000575547 SHPRHQ149N8 1683 aa9.7□□□□□ -0.86
POLR2A-204ENST00000575547 FOXO3O43524 673 aa9.69□□□□□ -0.86
POLR2A-204ENST00000575547 RBM6P78332 1123 aaKnown RBP9.69□□□□□ -0.86
POLR2A-204ENST00000575547 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
POLR2A-204ENST00000575547 PTCH1Q13635 1447 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms