RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
PRPF8-206ENST00000572723 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
PRPF8-206ENST00000572723 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
PRPF8-206ENST00000572723 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
PRPF8-206ENST00000572723 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
PRPF8-206ENST00000572723 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
PRPF8-206ENST00000572723 TBX22Q9Y458 520 aa17.83■□□□□ 0.44
PRPF8-206ENST00000572723 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
PRPF8-206ENST00000572723 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
PRPF8-206ENST00000572723 TMEM94Q12767 1356 aa17.82■□□□□ 0.44
PRPF8-206ENST00000572723 PLEKHG1Q9ULL1 1385 aa17.82■□□□□ 0.44
PRPF8-206ENST00000572723 E9PCH4 1651 aa17.82■□□□□ 0.44
PRPF8-206ENST00000572723 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
PRPF8-206ENST00000572723 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
PRPF8-206ENST00000572723 RBM33Q96EV2 1170 aaKnown RBP17.77■□□□□ 0.44
PRPF8-206ENST00000572723 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
PRPF8-206ENST00000572723 RRBP1Q9P2E9 1410 aaKnown RBP17.77■□□□□ 0.44
PRPF8-206ENST00000572723 NKTRP30414 1462 aaKnown RBP17.76■□□□□ 0.43
PRPF8-206ENST00000572723 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
PRPF8-206ENST00000572723 MED1Q15648 1581 aaPredicted RBP17.75■□□□□ 0.43
PRPF8-206ENST00000572723 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
PRPF8-206ENST00000572723 NWD1Q149M9 1564 aa17.74■□□□□ 0.43
PRPF8-206ENST00000572723 MSH6P52701 1360 aa17.74■□□□□ 0.43
PRPF8-206ENST00000572723 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
PRPF8-206ENST00000572723 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
PRPF8-206ENST00000572723 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
PRPF8-206ENST00000572723 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
PRPF8-206ENST00000572723 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
PRPF8-206ENST00000572723 NAIPQ13075 1403 aa17.71■□□□□ 0.43
PRPF8-206ENST00000572723 ZNF326Q5BKZ1 582 aaKnown RBP17.69■□□□□ 0.42
PRPF8-206ENST00000572723 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
PRPF8-206ENST00000572723 SPHKAPQ2M3C7 1700 aa17.67■□□□□ 0.42
PRPF8-206ENST00000572723 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
PRPF8-206ENST00000572723 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
PRPF8-206ENST00000572723 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
PRPF8-206ENST00000572723 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
PRPF8-206ENST00000572723 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
PRPF8-206ENST00000572723 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.42
PRPF8-206ENST00000572723 HFM1A2PYH4 1435 aa17.64■□□□□ 0.41
PRPF8-206ENST00000572723 TRPM2O94759 1503 aa17.63■□□□□ 0.41
PRPF8-206ENST00000572723 ATF3P18847 181 aa17.63■□□□□ 0.41
PRPF8-206ENST00000572723 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
PRPF8-206ENST00000572723 PTPRUQ92729 1446 aa17.61■□□□□ 0.41
PRPF8-206ENST00000572723 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
PRPF8-206ENST00000572723 KIF1BO60333 1816 aa17.59■□□□□ 0.41
PRPF8-206ENST00000572723 SETBP1Q9Y6X0 1596 aa17.59■□□□□ 0.41
PRPF8-206ENST00000572723 VGFO15240 615 aaPredicted RBP17.59■□□□□ 0.41
PRPF8-206ENST00000572723 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
PRPF8-206ENST00000572723 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
PRPF8-206ENST00000572723 CLTCL1P53675 1640 aa17.58■□□□□ 0.4
PRPF8-206ENST00000572723 METP08581 1390 aa17.57■□□□□ 0.4
PRPF8-206ENST00000572723 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
PRPF8-206ENST00000572723 JCADQ9P266 1359 aa17.56■□□□□ 0.4
PRPF8-206ENST00000572723 PHLPP1O60346 1717 aa17.55■□□□□ 0.4
PRPF8-206ENST00000572723 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
PRPF8-206ENST00000572723 DCCP43146 1447 aa17.53■□□□□ 0.4
PRPF8-206ENST00000572723 BRINP3Q76B58 766 aa17.52■□□□□ 0.4
PRPF8-206ENST00000572723 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
PRPF8-206ENST00000572723 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
PRPF8-206ENST00000572723 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
PRPF8-206ENST00000572723 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
PRPF8-206ENST00000572723 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
PRPF8-206ENST00000572723 FOXD1Q16676 465 aa17.49■□□□□ 0.39
PRPF8-206ENST00000572723 COL16A1Q07092 1604 aaPredicted RBP17.48■□□□□ 0.39
PRPF8-206ENST00000572723 AHDC1Q5TGY3 1603 aaPredicted RBP17.47■□□□□ 0.39
PRPF8-206ENST00000572723 MST1RQ04912 1400 aa17.46■□□□□ 0.39
PRPF8-206ENST00000572723 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
PRPF8-206ENST00000572723 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
PRPF8-206ENST00000572723 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
PRPF8-206ENST00000572723 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
PRPF8-206ENST00000572723 PPLO60437 1756 aa17.43■□□□□ 0.38
PRPF8-206ENST00000572723 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
PRPF8-206ENST00000572723 MEX3CQ5U5Q3 659 aaKnown RBP17.42■□□□□ 0.38
PRPF8-206ENST00000572723 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
PRPF8-206ENST00000572723 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
PRPF8-206ENST00000572723 ADGRF5Q8IZF2 1346 aa17.41■□□□□ 0.38
PRPF8-206ENST00000572723 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
PRPF8-206ENST00000572723 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
PRPF8-206ENST00000572723 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
PRPF8-206ENST00000572723 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
PRPF8-206ENST00000572723 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
PRPF8-206ENST00000572723 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
PRPF8-206ENST00000572723 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.38
PRPF8-206ENST00000572723 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
PRPF8-206ENST00000572723 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
PRPF8-206ENST00000572723 LRP6O75581 1613 aa17.37■□□□□ 0.37
PRPF8-206ENST00000572723 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
PRPF8-206ENST00000572723 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
PRPF8-206ENST00000572723 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
PRPF8-206ENST00000572723 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
PRPF8-206ENST00000572723 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
PRPF8-206ENST00000572723 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
PRPF8-206ENST00000572723 STK26Q9P289 416 aa17.34■□□□□ 0.37
PRPF8-206ENST00000572723 ABCC11Q96J66 1382 aa17.33■□□□□ 0.36
PRPF8-206ENST00000572723 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
PRPF8-206ENST00000572723 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
PRPF8-206ENST00000572723 SOS2Q07890 1332 aaPredicted RBP17.32■□□□□ 0.36
PRPF8-206ENST00000572723 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
PRPF8-206ENST00000572723 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
PRPF8-206ENST00000572723 PNPLA6Q8IY17 1366 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms