RNA–Protein interactions for RNA: ENST00000571484.1

CBX2-203, Transcript of chromobox 2, humanhuman

TSL 1 (best)

Gene CBX2, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-203ENST00000571484 XIRP1Q702N8 1843 aaKnown RBP29.49■■■□□ 2.31
CBX2-203ENST00000571484 GCC2Q8IWJ2 1684 aa29.48■■■□□ 2.31
CBX2-203ENST00000571484 RIMS2Q9UQ26 1411 aa29.46■■■□□ 2.31
CBX2-203ENST00000571484 PROSER2Q86WR7 435 aaPredicted RBP29.46■■■□□ 2.31
CBX2-203ENST00000571484 NUP155O75694 1391 aa29.45■■■□□ 2.31
CBX2-203ENST00000571484 PLEKHG1Q9ULL1 1385 aa29.45■■■□□ 2.31
CBX2-203ENST00000571484 RBM33Q96EV2 1170 aaKnown RBP29.45■■■□□ 2.31
CBX2-203ENST00000571484 TMEM131LA2VDJ0 1609 aa29.45■■■□□ 2.3
CBX2-203ENST00000571484 PPP1R15AO75807 674 aaPredicted RBP29.44■■■□□ 2.3
CBX2-203ENST00000571484 CHGAP10645 457 aaKnown RBP29.44■■■□□ 2.3
CBX2-203ENST00000571484 HDGFP51858 240 aaKnown RBP29.44■■■□□ 2.3
CBX2-203ENST00000571484 IQGAP3Q86VI3 1631 aa29.43■■■□□ 2.3
CBX2-203ENST00000571484 E9PCH4 1651 aa29.43■■■□□ 2.3
CBX2-203ENST00000571484 MYO5BQ9ULV0 1848 aa29.41■■■□□ 2.3
CBX2-203ENST00000571484 NKTRP30414 1462 aaKnown RBP29.4■■■□□ 2.3
CBX2-203ENST00000571484 NWD1Q149M9 1564 aa29.39■■■□□ 2.3
CBX2-203ENST00000571484 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.39■■■□□ 2.3
CBX2-203ENST00000571484 FAM135BQ49AJ0 1406 aa29.38■■■□□ 2.29
CBX2-203ENST00000571484 NUTM2DQ5VT03 806 aaPredicted RBP29.35■■■□□ 2.29
CBX2-203ENST00000571484 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
CBX2-203ENST00000571484 TBX22Q9Y458 520 aa29.35■■■□□ 2.29
CBX2-203ENST00000571484 MSH6P52701 1360 aa29.31■■■□□ 2.28
CBX2-203ENST00000571484 ADAMTS13Q76LX8 1427 aa29.29■■■□□ 2.28
CBX2-203ENST00000571484 RRBP1Q9P2E9 1410 aaKnown RBP29.28■■■□□ 2.28
CBX2-203ENST00000571484 CHD2O14647 1828 aaKnown RBP29.27■■■□□ 2.28
CBX2-203ENST00000571484 SLAIN2Q9P270 581 aa29.24■■■□□ 2.27
CBX2-203ENST00000571484 ROBO1Q9Y6N7 1651 aa29.24■■■□□ 2.27
CBX2-203ENST00000571484 DIP2AQ14689 1571 aa29.22■■■□□ 2.27
CBX2-203ENST00000571484 PIK3R4Q99570 1358 aa29.22■■■□□ 2.27
CBX2-203ENST00000571484 NCOA3Q9Y6Q9 1424 aa29.2■■■□□ 2.27
CBX2-203ENST00000571484 NAIPQ13075 1403 aa29.2■■■□□ 2.26
CBX2-203ENST00000571484 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
CBX2-203ENST00000571484 C14orf37Q86TY3 774 aa29.17■■■□□ 2.26
CBX2-203ENST00000571484 ZNF326Q5BKZ1 582 aaKnown RBP29.16■■■□□ 2.26
CBX2-203ENST00000571484 RGS17Q9UGC6 210 aaPredicted RBP29.16■■■□□ 2.26
CBX2-203ENST00000571484 AMOTL2Q9Y2J4 779 aa29.15■■■□□ 2.26
CBX2-203ENST00000571484 TRPM2O94759 1503 aa29.15■■■□□ 2.26
CBX2-203ENST00000571484 PTPRUQ92729 1446 aa29.14■■■□□ 2.26
CBX2-203ENST00000571484 C19orf44Q9H6X5 657 aa29.12■■■□□ 2.25
CBX2-203ENST00000571484 CADPS2Q86UW7 1296 aa29.1■■■□□ 2.25
CBX2-203ENST00000571484 ATF3P18847 181 aa29.09■■■□□ 2.25
CBX2-203ENST00000571484 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
CBX2-203ENST00000571484 CLTCL1P53675 1640 aa29.08■■■□□ 2.25
CBX2-203ENST00000571484 NRXN3Q9Y4C0 1643 aa29.08■■■□□ 2.25
CBX2-203ENST00000571484 HFM1A2PYH4 1435 aa29.07■■■□□ 2.24
CBX2-203ENST00000571484 TRIM52Q96A61 297 aa29.07■■■□□ 2.24
CBX2-203ENST00000571484 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.06■■■□□ 2.24
CBX2-203ENST00000571484 PHLPP1O60346 1717 aa29.05■■■□□ 2.24
CBX2-203ENST00000571484 METP08581 1390 aa29.04■■■□□ 2.24
CBX2-203ENST00000571484 JCADQ9P266 1359 aa29.04■■■□□ 2.24
CBX2-203ENST00000571484 NEXMIFQ5QGS0 1516 aa29.02■■■□□ 2.24
CBX2-203ENST00000571484 SLC4A1APQ9BWU0 796 aaKnown RBP29■■■□□ 2.23
CBX2-203ENST00000571484 XRN1Q8IZH2 1706 aaKnown RBP29■■■□□ 2.23
CBX2-203ENST00000571484 COL16A1Q07092 1604 aaPredicted RBP28.99■■■□□ 2.23
CBX2-203ENST00000571484 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
CBX2-203ENST00000571484 DCCP43146 1447 aa28.97■■■□□ 2.23
CBX2-203ENST00000571484 BRINP3Q76B58 766 aa28.96■■■□□ 2.23
CBX2-203ENST00000571484 AHDC1Q5TGY3 1603 aaPredicted RBP28.94■■■□□ 2.22
CBX2-203ENST00000571484 KIF1BO60333 1816 aa28.93■■■□□ 2.22
CBX2-203ENST00000571484 VGFO15240 615 aaPredicted RBP28.92■■■□□ 2.22
CBX2-203ENST00000571484 SPATA31A6Q5VVP1 1343 aa28.9■■■□□ 2.22
CBX2-203ENST00000571484 MST1RQ04912 1400 aa28.89■■■□□ 2.22
CBX2-203ENST00000571484 RPGRIP1LQ68CZ1 1315 aa28.89■■■□□ 2.21
CBX2-203ENST00000571484 FOXD1Q16676 465 aa28.88■■■□□ 2.21
CBX2-203ENST00000571484 ADGRL3Q9HAR2 1447 aa28.87■■■□□ 2.21
CBX2-203ENST00000571484 LRP6O75581 1613 aa28.86■■■□□ 2.21
CBX2-203ENST00000571484 ASXL1Q8IXJ9 1541 aa28.85■■■□□ 2.21
CBX2-203ENST00000571484 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
CBX2-203ENST00000571484 PTCH1Q13635 1447 aa28.81■■■□□ 2.2
CBX2-203ENST00000571484 ROBO2Q9HCK4 1378 aa28.81■■■□□ 2.2
CBX2-203ENST00000571484 SHPRHQ149N8 1683 aa28.8■■■□□ 2.2
CBX2-203ENST00000571484 SETD1AO15047 1707 aaKnown RBP28.79■■■□□ 2.2
CBX2-203ENST00000571484 SETD5Q9C0A6 1442 aa28.78■■■□□ 2.2
CBX2-203ENST00000571484 NALCNQ8IZF0 1738 aa28.78■■■□□ 2.2
CBX2-203ENST00000571484 MPHOSPH9Q99550 1183 aa28.78■■■□□ 2.2
CBX2-203ENST00000571484 DDX17Q92841 729 aaKnown RBP28.77■■■□□ 2.2
CBX2-203ENST00000571484 CCDC144AA2RUR9 1427 aa28.77■■■□□ 2.2
CBX2-203ENST00000571484 PRAG1Q86YV5 1406 aa28.76■■■□□ 2.19
CBX2-203ENST00000571484 NUTM2BA6NNL0 878 aaPredicted RBP28.75■■■□□ 2.19
CBX2-203ENST00000571484 NUTM2EB1AL46 878 aaPredicted RBP28.75■■■□□ 2.19
CBX2-203ENST00000571484 NUTM2AQ8IVF1 878 aaPredicted RBP28.75■■■□□ 2.19
CBX2-203ENST00000571484 PPLO60437 1756 aa28.75■■■□□ 2.19
CBX2-203ENST00000571484 LRRC59Q96AG4 307 aaKnown RBP28.74■■■□□ 2.19
CBX2-203ENST00000571484 ADGRF5Q8IZF2 1346 aa28.73■■■□□ 2.19
CBX2-203ENST00000571484 C1orf167Q5SNV9 1468 aa28.73■■■□□ 2.19
CBX2-203ENST00000571484 NHSL1Q5SYE7 1610 aa28.73■■■□□ 2.19
CBX2-203ENST00000571484 RGL3Q3MIN7 710 aa28.73■■■□□ 2.19
CBX2-203ENST00000571484 ZNF772Q68DY9 489 aaPredicted RBP28.73■■■□□ 2.19
CBX2-203ENST00000571484 SPATA31E1Q6ZUB1 1445 aa28.71■■■□□ 2.19
CBX2-203ENST00000571484 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
CBX2-203ENST00000571484 PNPLA6Q8IY17 1366 aa28.66■■■□□ 2.18
CBX2-203ENST00000571484 ANKRD30BQ9BXX2 1392 aa28.65■■■□□ 2.18
CBX2-203ENST00000571484 STK26Q9P289 416 aa28.62■■■□□ 2.17
CBX2-203ENST00000571484 AFF2P51816 1311 aa28.62■■■□□ 2.17
CBX2-203ENST00000571484 SOS2Q07890 1332 aaPredicted RBP28.61■■■□□ 2.17
CBX2-203ENST00000571484 ACIN1Q9UKV3 1341 aaKnown RBP28.61■■■□□ 2.17
CBX2-203ENST00000571484 RXRBP28702 533 aa28.59■■■□□ 2.17
CBX2-203ENST00000571484 LRPPRCP42704 1394 aaKnown RBP28.59■■■□□ 2.17
CBX2-203ENST00000571484 LAMC1P11047 1609 aa28.58■■■□□ 2.17
CBX2-203ENST00000571484 TMEM132EQ6IEE7 984 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms