RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 SLC26A8Q96RN1 970 aa17.39■□□□□ 0.37
LITAF-206ENST00000571277 NUP155O75694 1391 aa17.39■□□□□ 0.37
LITAF-206ENST00000571277 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
LITAF-206ENST00000571277 KCNA6P17658 529 aa17.37■□□□□ 0.37
LITAF-206ENST00000571277 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
LITAF-206ENST00000571277 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
LITAF-206ENST00000571277 NKTRP30414 1462 aaKnown RBP17.34■□□□□ 0.37
LITAF-206ENST00000571277 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
LITAF-206ENST00000571277 MED1Q15648 1581 aaPredicted RBP17.34■□□□□ 0.37
LITAF-206ENST00000571277 CHD2O14647 1828 aaKnown RBP17.33■□□□□ 0.37
LITAF-206ENST00000571277 NAIPQ13075 1403 aa17.31■□□□□ 0.36
LITAF-206ENST00000571277 SPHKAPQ2M3C7 1700 aa17.31■□□□□ 0.36
LITAF-206ENST00000571277 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
LITAF-206ENST00000571277 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
LITAF-206ENST00000571277 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
LITAF-206ENST00000571277 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
LITAF-206ENST00000571277 HDGFP51858 240 aaKnown RBP17.29■□□□□ 0.36
LITAF-206ENST00000571277 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
LITAF-206ENST00000571277 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
LITAF-206ENST00000571277 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
LITAF-206ENST00000571277 SOCS7O14512 581 aa17.28■□□□□ 0.36
LITAF-206ENST00000571277 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
LITAF-206ENST00000571277 BCANQ96GW7 911 aa17.28■□□□□ 0.36
LITAF-206ENST00000571277 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
LITAF-206ENST00000571277 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
LITAF-206ENST00000571277 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
LITAF-206ENST00000571277 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
LITAF-206ENST00000571277 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
LITAF-206ENST00000571277 ROBO1Q9Y6N7 1651 aa17.24■□□□□ 0.35
LITAF-206ENST00000571277 CLTCL1P53675 1640 aa17.24■□□□□ 0.35
LITAF-206ENST00000571277 TRPM2O94759 1503 aa17.23■□□□□ 0.35
LITAF-206ENST00000571277 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
LITAF-206ENST00000571277 MSH6P52701 1360 aa17.22■□□□□ 0.35
LITAF-206ENST00000571277 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
LITAF-206ENST00000571277 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
LITAF-206ENST00000571277 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
LITAF-206ENST00000571277 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
LITAF-206ENST00000571277 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
LITAF-206ENST00000571277 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
LITAF-206ENST00000571277 KIF1BO60333 1816 aa17.17■□□□□ 0.34
LITAF-206ENST00000571277 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
LITAF-206ENST00000571277 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
LITAF-206ENST00000571277 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
LITAF-206ENST00000571277 METP08581 1390 aa17.14■□□□□ 0.33
LITAF-206ENST00000571277 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
LITAF-206ENST00000571277 PHLPP1O60346 1717 aa17.13■□□□□ 0.33
LITAF-206ENST00000571277 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
LITAF-206ENST00000571277 COL16A1Q07092 1604 aaPredicted RBP17.11■□□□□ 0.33
LITAF-206ENST00000571277 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
LITAF-206ENST00000571277 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
LITAF-206ENST00000571277 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
LITAF-206ENST00000571277 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
LITAF-206ENST00000571277 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
LITAF-206ENST00000571277 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
LITAF-206ENST00000571277 DCCP43146 1447 aa17.08■□□□□ 0.32
LITAF-206ENST00000571277 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
LITAF-206ENST00000571277 PPLO60437 1756 aa17.07■□□□□ 0.32
LITAF-206ENST00000571277 ATF3P18847 181 aa17.06■□□□□ 0.32
LITAF-206ENST00000571277 FOXD1Q16676 465 aa17.06■□□□□ 0.32
LITAF-206ENST00000571277 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
LITAF-206ENST00000571277 JCADQ9P266 1359 aa17.04■□□□□ 0.32
LITAF-206ENST00000571277 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
LITAF-206ENST00000571277 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
LITAF-206ENST00000571277 MST1RQ04912 1400 aa17.04■□□□□ 0.32
LITAF-206ENST00000571277 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
LITAF-206ENST00000571277 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
LITAF-206ENST00000571277 PRAG1Q86YV5 1406 aa17.03■□□□□ 0.32
LITAF-206ENST00000571277 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
LITAF-206ENST00000571277 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
LITAF-206ENST00000571277 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
LITAF-206ENST00000571277 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
LITAF-206ENST00000571277 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
LITAF-206ENST00000571277 IFT172Q9UG01 1749 aa17■□□□□ 0.31
LITAF-206ENST00000571277 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
LITAF-206ENST00000571277 LRP6O75581 1613 aa16.99■□□□□ 0.31
LITAF-206ENST00000571277 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
LITAF-206ENST00000571277 CCDC144AA2RUR9 1427 aa16.99■□□□□ 0.31
LITAF-206ENST00000571277 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
LITAF-206ENST00000571277 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.31
LITAF-206ENST00000571277 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.3
LITAF-206ENST00000571277 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.3
LITAF-206ENST00000571277 LAMC1P11047 1609 aa16.94■□□□□ 0.3
LITAF-206ENST00000571277 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
LITAF-206ENST00000571277 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
LITAF-206ENST00000571277 RGL3Q3MIN7 710 aa16.93■□□□□ 0.3
LITAF-206ENST00000571277 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
LITAF-206ENST00000571277 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
LITAF-206ENST00000571277 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
LITAF-206ENST00000571277 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
LITAF-206ENST00000571277 TECPR2O15040 1411 aa16.9■□□□□ 0.3
LITAF-206ENST00000571277 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
LITAF-206ENST00000571277 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
LITAF-206ENST00000571277 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
LITAF-206ENST00000571277 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
LITAF-206ENST00000571277 ORAI2Q96SN7 254 aa16.87■□□□□ 0.29
LITAF-206ENST00000571277 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
LITAF-206ENST00000571277 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
LITAF-206ENST00000571277 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
LITAF-206ENST00000571277 TMEM132EQ6IEE7 984 aa16.85■□□□□ 0.29
LITAF-206ENST00000571277 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms