RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 SENP3Q9H4L4 574 aaPredicted RBP31.51■■■□□ 2.63
LITAF-205ENST00000570904 ILDR2Q71H61 639 aa31.5■■■□□ 2.63
LITAF-205ENST00000570904 RIMS2Q9UQ26 1411 aa31.49■■■□□ 2.63
LITAF-205ENST00000570904 CHGAP10645 457 aaKnown RBP31.49■■■□□ 2.63
LITAF-205ENST00000570904 BCANQ96GW7 911 aa31.48■■■□□ 2.63
LITAF-205ENST00000570904 XIRP1Q702N8 1843 aaKnown RBP31.47■■■□□ 2.63
LITAF-205ENST00000570904 KCNA6P17658 529 aa31.45■■■□□ 2.63
LITAF-205ENST00000570904 PPP1R15AO75807 674 aaPredicted RBP31.44■■■□□ 2.62
LITAF-205ENST00000570904 PLEKHG1Q9ULL1 1385 aa31.43■■■□□ 2.62
LITAF-205ENST00000570904 TMEM94Q12767 1356 aa31.43■■■□□ 2.62
LITAF-205ENST00000570904 NWD1Q149M9 1564 aa31.39■■■□□ 2.62
LITAF-205ENST00000570904 HDGFP51858 240 aaKnown RBP31.39■■■□□ 2.62
LITAF-205ENST00000570904 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
LITAF-205ENST00000570904 RBM33Q96EV2 1170 aaKnown RBP31.38■■■□□ 2.61
LITAF-205ENST00000570904 PROSER2Q86WR7 435 aaPredicted RBP31.37■■■□□ 2.61
LITAF-205ENST00000570904 NAIPQ13075 1403 aa31.37■■■□□ 2.61
LITAF-205ENST00000570904 NKTRP30414 1462 aaKnown RBP31.36■■■□□ 2.61
LITAF-205ENST00000570904 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.35■■■□□ 2.61
LITAF-205ENST00000570904 MED1Q15648 1581 aaPredicted RBP31.33■■■□□ 2.61
LITAF-205ENST00000570904 SPHKAPQ2M3C7 1700 aa31.32■■■□□ 2.6
LITAF-205ENST00000570904 ADAMTS13Q76LX8 1427 aa31.29■■■□□ 2.6
LITAF-205ENST00000570904 TBX22Q9Y458 520 aa31.28■■■□□ 2.6
LITAF-205ENST00000570904 CHD2O14647 1828 aaKnown RBP31.27■■■□□ 2.6
LITAF-205ENST00000570904 HFM1A2PYH4 1435 aa31.25■■■□□ 2.59
LITAF-205ENST00000570904 DIP2AQ14689 1571 aa31.24■■■□□ 2.59
LITAF-205ENST00000570904 FAM135BQ49AJ0 1406 aa31.23■■■□□ 2.59
LITAF-205ENST00000570904 SOCS7O14512 581 aa31.22■■■□□ 2.59
LITAF-205ENST00000570904 MSH6P52701 1360 aa31.21■■■□□ 2.59
LITAF-205ENST00000570904 CLTCL1P53675 1640 aa31.2■■■□□ 2.59
LITAF-205ENST00000570904 TRPM2O94759 1503 aa31.2■■■□□ 2.59
LITAF-205ENST00000570904 TRIM52Q96A61 297 aa31.2■■■□□ 2.59
LITAF-205ENST00000570904 ZNF326Q5BKZ1 582 aaKnown RBP31.19■■■□□ 2.58
LITAF-205ENST00000570904 ROBO1Q9Y6N7 1651 aa31.17■■■□□ 2.58
LITAF-205ENST00000570904 PIK3R4Q99570 1358 aa31.16■■■□□ 2.58
LITAF-205ENST00000570904 NRXN3Q9Y4C0 1643 aa31.13■■■□□ 2.57
LITAF-205ENST00000570904 PTPRUQ92729 1446 aa31.13■■■□□ 2.57
LITAF-205ENST00000570904 SETBP1Q9Y6X0 1596 aa31.12■■■□□ 2.57
LITAF-205ENST00000570904 PHF23Q9BUL5 403 aaPredicted RBP31.11■■■□□ 2.57
LITAF-205ENST00000570904 NCOA3Q9Y6Q9 1424 aa31.1■■■□□ 2.57
LITAF-205ENST00000570904 C14orf37Q86TY3 774 aa31.1■■■□□ 2.57
LITAF-205ENST00000570904 AMOTL2Q9Y2J4 779 aa31.1■■■□□ 2.57
LITAF-205ENST00000570904 NEXMIFQ5QGS0 1516 aa31.09■■■□□ 2.57
LITAF-205ENST00000570904 SLC4A1APQ9BWU0 796 aaKnown RBP31.09■■■□□ 2.57
LITAF-205ENST00000570904 SLAIN2Q9P270 581 aa31.09■■■□□ 2.57
LITAF-205ENST00000570904 KIF1BO60333 1816 aa31.05■■■□□ 2.56
LITAF-205ENST00000570904 XRN1Q8IZH2 1706 aaKnown RBP31.03■■■□□ 2.56
LITAF-205ENST00000570904 METP08581 1390 aa31.03■■■□□ 2.56
LITAF-205ENST00000570904 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.56
LITAF-205ENST00000570904 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
LITAF-205ENST00000570904 FOXD1Q16676 465 aa30.99■■■□□ 2.55
LITAF-205ENST00000570904 ATF3P18847 181 aa30.98■■■□□ 2.55
LITAF-205ENST00000570904 CADPS2Q86UW7 1296 aa30.98■■■□□ 2.55
LITAF-205ENST00000570904 PHLPP1O60346 1717 aa30.97■■■□□ 2.55
LITAF-205ENST00000570904 VGFO15240 615 aaPredicted RBP30.9■■■□□ 2.54
LITAF-205ENST00000570904 COL16A1Q07092 1604 aaPredicted RBP30.89■■■□□ 2.54
LITAF-205ENST00000570904 RGS17Q9UGC6 210 aaPredicted RBP30.89■■■□□ 2.54
LITAF-205ENST00000570904 RPGRIP1LQ68CZ1 1315 aa30.89■■■□□ 2.54
LITAF-205ENST00000570904 DCCP43146 1447 aa30.89■■■□□ 2.53
LITAF-205ENST00000570904 JCADQ9P266 1359 aa30.88■■■□□ 2.53
LITAF-205ENST00000570904 MPHOSPH9Q99550 1183 aa30.87■■■□□ 2.53
LITAF-205ENST00000570904 SETD1AO15047 1707 aaKnown RBP30.86■■■□□ 2.53
LITAF-205ENST00000570904 PPLO60437 1756 aa30.85■■■□□ 2.53
LITAF-205ENST00000570904 CCDC144AA2RUR9 1427 aa30.85■■■□□ 2.53
LITAF-205ENST00000570904 AHDC1Q5TGY3 1603 aaPredicted RBP30.84■■■□□ 2.53
LITAF-205ENST00000570904 ADGRL3Q9HAR2 1447 aa30.84■■■□□ 2.53
LITAF-205ENST00000570904 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
LITAF-205ENST00000570904 MST1RQ04912 1400 aa30.82■■■□□ 2.52
LITAF-205ENST00000570904 NALCNQ8IZF0 1738 aa30.8■■■□□ 2.52
LITAF-205ENST00000570904 PTCH1Q13635 1447 aa30.8■■■□□ 2.52
LITAF-205ENST00000570904 SETD5Q9C0A6 1442 aa30.8■■■□□ 2.52
LITAF-205ENST00000570904 ROBO2Q9HCK4 1378 aa30.79■■■□□ 2.52
LITAF-205ENST00000570904 ASXL1Q8IXJ9 1541 aa30.78■■■□□ 2.52
LITAF-205ENST00000570904 RGL3Q3MIN7 710 aa30.78■■■□□ 2.52
LITAF-205ENST00000570904 SPATA31E1Q6ZUB1 1445 aa30.78■■■□□ 2.52
LITAF-205ENST00000570904 ADGRF5Q8IZF2 1346 aa30.75■■■□□ 2.51
LITAF-205ENST00000570904 POTEAQ6S8J7 498 aa30.73■■■□□ 2.51
LITAF-205ENST00000570904 LRP6O75581 1613 aa30.73■■■□□ 2.51
LITAF-205ENST00000570904 PRAG1Q86YV5 1406 aa30.73■■■□□ 2.51
LITAF-205ENST00000570904 SPATA31A6Q5VVP1 1343 aa30.71■■■□□ 2.51
LITAF-205ENST00000570904 RAB3GAP2Q9H2M9 1393 aa30.7■■■□□ 2.51
LITAF-205ENST00000570904 SHPRHQ149N8 1683 aa30.7■■■□□ 2.5
LITAF-205ENST00000570904 IFT172Q9UG01 1749 aa30.69■■■□□ 2.5
LITAF-205ENST00000570904 NHSL1Q5SYE7 1610 aa30.69■■■□□ 2.5
LITAF-205ENST00000570904 ANKRD30BQ9BXX2 1392 aa30.68■■■□□ 2.5
LITAF-205ENST00000570904 ACIN1Q9UKV3 1341 aaKnown RBP30.68■■■□□ 2.5
LITAF-205ENST00000570904 DDX17Q92841 729 aaKnown RBP30.67■■■□□ 2.5
LITAF-205ENST00000570904 C1orf167Q5SNV9 1468 aa30.67■■■□□ 2.5
LITAF-205ENST00000570904 MEX3CQ5U5Q3 659 aaKnown RBP30.64■■■□□ 2.5
LITAF-205ENST00000570904 PIK3C2GO75747 1445 aa30.62■■■□□ 2.49
LITAF-205ENST00000570904 STK26Q9P289 416 aa30.61■■■□□ 2.49
LITAF-205ENST00000570904 NUTM2BA6NNL0 878 aaPredicted RBP30.59■■■□□ 2.49
LITAF-205ENST00000570904 NUTM2EB1AL46 878 aaPredicted RBP30.59■■■□□ 2.49
LITAF-205ENST00000570904 NUTM2AQ8IVF1 878 aaPredicted RBP30.59■■■□□ 2.49
LITAF-205ENST00000570904 TMEM132EQ6IEE7 984 aa30.58■■■□□ 2.49
LITAF-205ENST00000570904 LRPPRCP42704 1394 aaKnown RBP30.57■■■□□ 2.48
LITAF-205ENST00000570904 LRRC59Q96AG4 307 aaKnown RBP30.57■■■□□ 2.48
LITAF-205ENST00000570904 ORAI2Q96SN7 254 aa30.57■■■□□ 2.48
LITAF-205ENST00000570904 TECPR2O15040 1411 aa30.56■■■□□ 2.48
LITAF-205ENST00000570904 WAPLQ7Z5K2 1190 aa30.54■■■□□ 2.48
LITAF-205ENST00000570904 CDC42BPGQ6DT37 1551 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms