RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 TK2O00142 265 aa11.64□□□□□ -0.55
KARS-210ENST00000568682 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
KARS-210ENST00000568682 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
KARS-210ENST00000568682 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
KARS-210ENST00000568682 RCCD1A6NED2 376 aa11.63□□□□□ -0.55
KARS-210ENST00000568682 DNAJB2P25686 324 aa11.63□□□□□ -0.55
KARS-210ENST00000568682 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
KARS-210ENST00000568682 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
KARS-210ENST00000568682 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
KARS-210ENST00000568682 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
KARS-210ENST00000568682 FAM217BQ9NTX9 383 aaPredicted RBP11.61□□□□□ -0.55
KARS-210ENST00000568682 MS4A1P11836 297 aa11.6□□□□□ -0.55
KARS-210ENST00000568682 TMEM134Q9H6X4 195 aa11.6□□□□□ -0.55
KARS-210ENST00000568682 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
KARS-210ENST00000568682 NESP48681 1621 aa11.58□□□□□ -0.56
KARS-210ENST00000568682 SSTR3P32745 418 aaPredicted RBP11.58□□□□□ -0.56
KARS-210ENST00000568682 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.56
KARS-210ENST00000568682 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
KARS-210ENST00000568682 SMAPO00193 183 aa11.57□□□□□ -0.56
KARS-210ENST00000568682 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
KARS-210ENST00000568682 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
KARS-210ENST00000568682 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
KARS-210ENST00000568682 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
KARS-210ENST00000568682 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
KARS-210ENST00000568682 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
KARS-210ENST00000568682 SULF1Q8IWU6 871 aa11.55□□□□□ -0.56
KARS-210ENST00000568682 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
KARS-210ENST00000568682 SEPT9Q9UHD8 586 aaPredicted RBP11.53□□□□□ -0.56
KARS-210ENST00000568682 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
KARS-210ENST00000568682 HRO43593 1189 aa11.51□□□□□ -0.57
KARS-210ENST00000568682 BEGAINQ9BUH8 593 aa11.51□□□□□ -0.57
KARS-210ENST00000568682 CD46P15529 392 aa11.5□□□□□ -0.57
KARS-210ENST00000568682 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
KARS-210ENST00000568682 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
KARS-210ENST00000568682 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
KARS-210ENST00000568682 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
KARS-210ENST00000568682 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
KARS-210ENST00000568682 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
KARS-210ENST00000568682 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
KARS-210ENST00000568682 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
KARS-210ENST00000568682 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
KARS-210ENST00000568682 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
KARS-210ENST00000568682 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.57
KARS-210ENST00000568682 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
KARS-210ENST00000568682 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
KARS-210ENST00000568682 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
KARS-210ENST00000568682 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
KARS-210ENST00000568682 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
KARS-210ENST00000568682 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
KARS-210ENST00000568682 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
KARS-210ENST00000568682 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
KARS-210ENST00000568682 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
KARS-210ENST00000568682 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
KARS-210ENST00000568682 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
KARS-210ENST00000568682 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
KARS-210ENST00000568682 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
KARS-210ENST00000568682 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
KARS-210ENST00000568682 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
KARS-210ENST00000568682 TIMELESSQ9UNS1 1208 aa11.41□□□□□ -0.58
KARS-210ENST00000568682 SLC10A3P09131 477 aa11.4□□□□□ -0.58
KARS-210ENST00000568682 NECTIN2Q92692 538 aa11.4□□□□□ -0.58
KARS-210ENST00000568682 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
KARS-210ENST00000568682 POTEMA6NI47 508 aa11.39□□□□□ -0.59
KARS-210ENST00000568682 GCGRP47871 477 aa11.39□□□□□ -0.59
KARS-210ENST00000568682 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
KARS-210ENST00000568682 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
KARS-210ENST00000568682 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
KARS-210ENST00000568682 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
KARS-210ENST00000568682 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
KARS-210ENST00000568682 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
KARS-210ENST00000568682 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
KARS-210ENST00000568682 GJA5P36382 358 aa11.37□□□□□ -0.59
KARS-210ENST00000568682 USP46P62068 366 aa11.37□□□□□ -0.59
KARS-210ENST00000568682 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
KARS-210ENST00000568682 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
KARS-210ENST00000568682 KDM4AO75164 1064 aa11.36□□□□□ -0.59
KARS-210ENST00000568682 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
KARS-210ENST00000568682 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
KARS-210ENST00000568682 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
KARS-210ENST00000568682 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
KARS-210ENST00000568682 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
KARS-210ENST00000568682 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
KARS-210ENST00000568682 SPTLC1O15269 473 aa11.32□□□□□ -0.6
KARS-210ENST00000568682 RNF40O75150 1001 aa11.32□□□□□ -0.6
KARS-210ENST00000568682 CFHP08603 1231 aa11.32□□□□□ -0.6
KARS-210ENST00000568682 WNT2BQ93097 391 aa11.32□□□□□ -0.6
KARS-210ENST00000568682 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
KARS-210ENST00000568682 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
KARS-210ENST00000568682 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
KARS-210ENST00000568682 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
KARS-210ENST00000568682 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
KARS-210ENST00000568682 CUX2O14529 1486 aa11.31□□□□□ -0.6
KARS-210ENST00000568682 HOXA2O43364 376 aa11.3□□□□□ -0.6
KARS-210ENST00000568682 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
KARS-210ENST00000568682 MOXD2PA6NHM9 499 aa11.29□□□□□ -0.6
KARS-210ENST00000568682 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
KARS-210ENST00000568682 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
KARS-210ENST00000568682 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
KARS-210ENST00000568682 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
KARS-210ENST00000568682 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms