RNA–Protein interactions for RNA: ENST00000566980.1

TMEM170A-203, Transcript of transmembrane protein 170A, humanhuman

TSL 5 BASIC

Gene TMEM170A, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-203ENST00000566980 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
TMEM170A-203ENST00000566980 RIMS2Q9UQ26 1411 aa23.4■■□□□ 1.34
TMEM170A-203ENST00000566980 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
TMEM170A-203ENST00000566980 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
TMEM170A-203ENST00000566980 NAIPQ13075 1403 aa23.37■■□□□ 1.33
TMEM170A-203ENST00000566980 NWD1Q149M9 1564 aa23.36■■□□□ 1.33
TMEM170A-203ENST00000566980 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
TMEM170A-203ENST00000566980 ILDR2Q71H61 639 aa23.33■■□□□ 1.33
TMEM170A-203ENST00000566980 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
TMEM170A-203ENST00000566980 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
TMEM170A-203ENST00000566980 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.32■■□□□ 1.32
TMEM170A-203ENST00000566980 SPHKAPQ2M3C7 1700 aa23.31■■□□□ 1.32
TMEM170A-203ENST00000566980 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
TMEM170A-203ENST00000566980 TBX22Q9Y458 520 aa23.3■■□□□ 1.32
TMEM170A-203ENST00000566980 CHD2O14647 1828 aaKnown RBP23.3■■□□□ 1.32
TMEM170A-203ENST00000566980 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
TMEM170A-203ENST00000566980 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
TMEM170A-203ENST00000566980 ADAMTS13Q76LX8 1427 aa23.29■■□□□ 1.32
TMEM170A-203ENST00000566980 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
TMEM170A-203ENST00000566980 BCANQ96GW7 911 aa23.28■■□□□ 1.32
TMEM170A-203ENST00000566980 DIP2AQ14689 1571 aa23.25■■□□□ 1.31
TMEM170A-203ENST00000566980 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
TMEM170A-203ENST00000566980 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
TMEM170A-203ENST00000566980 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
TMEM170A-203ENST00000566980 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
TMEM170A-203ENST00000566980 RBM33Q96EV2 1170 aaKnown RBP23.23■■□□□ 1.31
TMEM170A-203ENST00000566980 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
TMEM170A-203ENST00000566980 TRPM2O94759 1503 aa23.23■■□□□ 1.31
TMEM170A-203ENST00000566980 CLTCL1P53675 1640 aa23.21■■□□□ 1.31
TMEM170A-203ENST00000566980 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
TMEM170A-203ENST00000566980 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
TMEM170A-203ENST00000566980 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
TMEM170A-203ENST00000566980 MSH6P52701 1360 aa23.16■■□□□ 1.3
TMEM170A-203ENST00000566980 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
TMEM170A-203ENST00000566980 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
TMEM170A-203ENST00000566980 ROBO1Q9Y6N7 1651 aa23.14■■□□□ 1.29
TMEM170A-203ENST00000566980 SOCS7O14512 581 aa23.14■■□□□ 1.29
TMEM170A-203ENST00000566980 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
TMEM170A-203ENST00000566980 KIF1BO60333 1816 aa23.13■■□□□ 1.29
TMEM170A-203ENST00000566980 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
TMEM170A-203ENST00000566980 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
TMEM170A-203ENST00000566980 SLAIN2Q9P270 581 aa23.11■■□□□ 1.29
TMEM170A-203ENST00000566980 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
TMEM170A-203ENST00000566980 XRN1Q8IZH2 1706 aaKnown RBP23.1■■□□□ 1.29
TMEM170A-203ENST00000566980 METP08581 1390 aa23.07■■□□□ 1.28
TMEM170A-203ENST00000566980 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
TMEM170A-203ENST00000566980 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
TMEM170A-203ENST00000566980 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
TMEM170A-203ENST00000566980 CADPS2Q86UW7 1296 aa23.02■■□□□ 1.28
TMEM170A-203ENST00000566980 C14orf37Q86TY3 774 aa23.01■■□□□ 1.27
TMEM170A-203ENST00000566980 SETD1AO15047 1707 aaKnown RBP23■■□□□ 1.27
TMEM170A-203ENST00000566980 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
TMEM170A-203ENST00000566980 FOXD1Q16676 465 aa23■■□□□ 1.27
TMEM170A-203ENST00000566980 DCCP43146 1447 aa22.99■■□□□ 1.27
TMEM170A-203ENST00000566980 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
TMEM170A-203ENST00000566980 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
TMEM170A-203ENST00000566980 PPLO60437 1756 aa22.99■■□□□ 1.27
TMEM170A-203ENST00000566980 ATF3P18847 181 aa22.98■■□□□ 1.27
TMEM170A-203ENST00000566980 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
TMEM170A-203ENST00000566980 COL16A1Q07092 1604 aaPredicted RBP22.97■■□□□ 1.27
TMEM170A-203ENST00000566980 RGS17Q9UGC6 210 aaPredicted RBP22.96■■□□□ 1.27
TMEM170A-203ENST00000566980 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
TMEM170A-203ENST00000566980 AHDC1Q5TGY3 1603 aaPredicted RBP22.94■■□□□ 1.26
TMEM170A-203ENST00000566980 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
TMEM170A-203ENST00000566980 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
TMEM170A-203ENST00000566980 CCDC144AA2RUR9 1427 aa22.93■■□□□ 1.26
TMEM170A-203ENST00000566980 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
TMEM170A-203ENST00000566980 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
TMEM170A-203ENST00000566980 JCADQ9P266 1359 aa22.92■■□□□ 1.26
TMEM170A-203ENST00000566980 MST1RQ04912 1400 aa22.91■■□□□ 1.26
TMEM170A-203ENST00000566980 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
TMEM170A-203ENST00000566980 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
TMEM170A-203ENST00000566980 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
TMEM170A-203ENST00000566980 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
TMEM170A-203ENST00000566980 ROBO2Q9HCK4 1378 aa22.88■■□□□ 1.25
TMEM170A-203ENST00000566980 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
TMEM170A-203ENST00000566980 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
TMEM170A-203ENST00000566980 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
TMEM170A-203ENST00000566980 RAB3GAP2Q9H2M9 1393 aa22.85■■□□□ 1.25
TMEM170A-203ENST00000566980 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
TMEM170A-203ENST00000566980 SHPRHQ149N8 1683 aa22.83■■□□□ 1.24
TMEM170A-203ENST00000566980 NHSL1Q5SYE7 1610 aa22.82■■□□□ 1.24
TMEM170A-203ENST00000566980 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
TMEM170A-203ENST00000566980 LRP6O75581 1613 aa22.8■■□□□ 1.24
TMEM170A-203ENST00000566980 POTEAQ6S8J7 498 aa22.8■■□□□ 1.24
TMEM170A-203ENST00000566980 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
TMEM170A-203ENST00000566980 TECPR2O15040 1411 aa22.79■■□□□ 1.24
TMEM170A-203ENST00000566980 PIK3C2GO75747 1445 aa22.79■■□□□ 1.24
TMEM170A-203ENST00000566980 LAMC1P11047 1609 aa22.76■■□□□ 1.23
TMEM170A-203ENST00000566980 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
TMEM170A-203ENST00000566980 NRXN1Q9ULB1 1477 aa22.75■■□□□ 1.23
TMEM170A-203ENST00000566980 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
TMEM170A-203ENST00000566980 HRCP23327 699 aa22.74■■□□□ 1.23
TMEM170A-203ENST00000566980 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
TMEM170A-203ENST00000566980 MYOM2P54296 1465 aa22.73■■□□□ 1.23
TMEM170A-203ENST00000566980 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
TMEM170A-203ENST00000566980 DDX17Q92841 729 aaKnown RBP22.72■■□□□ 1.23
TMEM170A-203ENST00000566980 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
TMEM170A-203ENST00000566980 TMEM132EQ6IEE7 984 aa22.7■■□□□ 1.22
TMEM170A-203ENST00000566980 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms