RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 PCDHB3Q9Y5E6 796 aa7.2□□□□□ -1.26
SMG1-212ENST00000566328 NUTM2FA1L443 756 aa7.19□□□□□ -1.26
SMG1-212ENST00000566328 TSHZ2Q9NRE2 1034 aa7.19□□□□□ -1.26
SMG1-212ENST00000566328 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
SMG1-212ENST00000566328 ZNF787Q6DD87 383 aa7.18□□□□□ -1.26
SMG1-212ENST00000566328 PDZRN3Q9UPQ7 1066 aa7.18□□□□□ -1.26
SMG1-212ENST00000566328 TMEM134Q9H6X4 195 aa7.17□□□□□ -1.26
SMG1-212ENST00000566328 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
SMG1-212ENST00000566328 FCHSD2O94868 740 aa7.15□□□□□ -1.26
SMG1-212ENST00000566328 RSPH4AQ5TD94 716 aa7.15□□□□□ -1.26
SMG1-212ENST00000566328 BLOC1S3Q6QNY0 202 aa7.15□□□□□ -1.26
SMG1-212ENST00000566328 RCCD1A6NED2 376 aa7.14□□□□□ -1.27
SMG1-212ENST00000566328 ACTN4O43707 911 aaKnown RBP7.14□□□□□ -1.27
SMG1-212ENST00000566328 OATP04181 439 aa7.14□□□□□ -1.27
SMG1-212ENST00000566328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.13□□□□□ -1.27
SMG1-212ENST00000566328 SLC19A1P41440 591 aa7.13□□□□□ -1.27
SMG1-212ENST00000566328 ZNF775Q96BV0 537 aaPredicted RBP7.13□□□□□ -1.27
SMG1-212ENST00000566328 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
SMG1-212ENST00000566328 NR1I2O75469 434 aa7.12□□□□□ -1.27
SMG1-212ENST00000566328 CFHP08603 1231 aa7.12□□□□□ -1.27
SMG1-212ENST00000566328 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
SMG1-212ENST00000566328 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
SMG1-212ENST00000566328 SEMA3EO15041 775 aa7.09□□□□□ -1.27
SMG1-212ENST00000566328 ADH1BP00325 375 aa7.09□□□□□ -1.27
SMG1-212ENST00000566328 HIC1Q14526 733 aa7.09□□□□□ -1.27
SMG1-212ENST00000566328 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
SMG1-212ENST00000566328 TLL1O43897 1013 aa7.08□□□□□ -1.28
SMG1-212ENST00000566328 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
SMG1-212ENST00000566328 PXYLP1Q8TE99 480 aa7.08□□□□□ -1.28
SMG1-212ENST00000566328 S1PR4O95977 384 aa7.07□□□□□ -1.28
SMG1-212ENST00000566328 SLC10A3P09131 477 aa7.07□□□□□ -1.28
SMG1-212ENST00000566328 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
SMG1-212ENST00000566328 SPRYD7Q5W111 196 aa7.07□□□□□ -1.28
SMG1-212ENST00000566328 PRR20EP86478 221 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 PRR20CP86479 221 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 PRR20DP86480 221 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 PRR20BP86481 221 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 PRR20AP86496 221 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 SCUBE3Q8IX30 993 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 SLC6A16Q9GZN6 736 aa7.06□□□□□ -1.28
SMG1-212ENST00000566328 DGAT1O75907 488 aa7.05□□□□□ -1.28
SMG1-212ENST00000566328 METTL3Q86U44 580 aaKnown RBP7.05□□□□□ -1.28
SMG1-212ENST00000566328 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
SMG1-212ENST00000566328 TESPA1A2RU30 521 aaPredicted RBP7.03□□□□□ -1.28
SMG1-212ENST00000566328 ZNF697Q5TEC3 545 aa7.03□□□□□ -1.28
SMG1-212ENST00000566328 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
SMG1-212ENST00000566328 SPSB2Q99619 263 aa7.03□□□□□ -1.28
SMG1-212ENST00000566328 DAXXQ9UER7 740 aaPredicted RBP7.03□□□□□ -1.28
SMG1-212ENST00000566328 GNPATO15228 680 aa7.02□□□□□ -1.29
SMG1-212ENST00000566328 MYT1Q01538 1121 aa7.02□□□□□ -1.29
SMG1-212ENST00000566328 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
SMG1-212ENST00000566328 SULF1Q8IWU6 871 aa7.02□□□□□ -1.29
SMG1-212ENST00000566328 RDH13Q8NBN7 331 aa7.02□□□□□ -1.29
SMG1-212ENST00000566328 POTECB2RU33 542 aa7.01□□□□□ -1.29
SMG1-212ENST00000566328 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
SMG1-212ENST00000566328 LMOD2Q6P5Q4 547 aa7.01□□□□□ -1.29
SMG1-212ENST00000566328 PUS10Q3MIT2 529 aaKnown RBP7□□□□□ -1.29
SMG1-212ENST00000566328 FAM187AA6NFU0 413 aa6.99□□□□□ -1.29
SMG1-212ENST00000566328 GDF9O60383 454 aa6.99□□□□□ -1.29
SMG1-212ENST00000566328 ATP6V1AP38606 617 aa6.99□□□□□ -1.29
SMG1-212ENST00000566328 DDX11L8A8MPP1 907 aa6.98□□□□□ -1.29
SMG1-212ENST00000566328 TNFRSF10AO00220 468 aa6.98□□□□□ -1.29
SMG1-212ENST00000566328 CD2BP2O95400 341 aaKnown RBP6.98□□□□□ -1.29
SMG1-212ENST00000566328 RPIAP49247 311 aa6.98□□□□□ -1.29
SMG1-212ENST00000566328 GRIPAP1Q4V328 841 aa6.98□□□□□ -1.29
SMG1-212ENST00000566328 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
SMG1-212ENST00000566328 PLCB2Q00722 1185 aa6.97□□□□□ -1.29
SMG1-212ENST00000566328 MORN1Q5T089 497 aa6.97□□□□□ -1.29
SMG1-212ENST00000566328 FECHP22830 423 aa6.96□□□□□ -1.3
SMG1-212ENST00000566328 FUT2Q10981 343 aa6.96□□□□□ -1.3
SMG1-212ENST00000566328 PLA2G2CQ5R387 149 aa6.96□□□□□ -1.3
SMG1-212ENST00000566328 SALL2Q9Y467 1007 aaPredicted RBP6.96□□□□□ -1.3
SMG1-212ENST00000566328 GCGRP47871 477 aa6.95□□□□□ -1.3
SMG1-212ENST00000566328 FOXC1Q12948 553 aa6.95□□□□□ -1.3
SMG1-212ENST00000566328 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
SMG1-212ENST00000566328 GPR37O15354 613 aa6.94□□□□□ -1.3
SMG1-212ENST00000566328 TREML4Q6UXN2 200 aa6.94□□□□□ -1.3
SMG1-212ENST00000566328 GPIHBP1Q8IV16 184 aa6.94□□□□□ -1.3
SMG1-212ENST00000566328 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
SMG1-212ENST00000566328 FCF1Q9Y324 198 aaKnown RBP6.94□□□□□ -1.3
SMG1-212ENST00000566328 ZBTB24O43167 697 aaPredicted RBP6.93□□□□□ -1.3
SMG1-212ENST00000566328 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
SMG1-212ENST00000566328 Q3C1V9 767 aa6.92□□□□□ -1.3
SMG1-212ENST00000566328 PKD2L1Q9P0L9 805 aa6.92□□□□□ -1.3
SMG1-212ENST00000566328 TULP1O00294 542 aaPredicted RBP6.91□□□□□ -1.3
SMG1-212ENST00000566328 BRICD5Q6PL45 260 aa6.91□□□□□ -1.3
SMG1-212ENST00000566328 CYP4X1Q8N118 509 aa6.91□□□□□ -1.3
SMG1-212ENST00000566328 FAM160A2Q8N612 972 aaPredicted RBP6.91□□□□□ -1.3
SMG1-212ENST00000566328 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
SMG1-212ENST00000566328 MSS51Q4VC12 460 aa6.9□□□□□ -1.3
SMG1-212ENST00000566328 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
SMG1-212ENST00000566328 NLRP7Q8WX94 980 aa6.9□□□□□ -1.3
SMG1-212ENST00000566328 AAASQ9NRG9 546 aa6.9□□□□□ -1.3
SMG1-212ENST00000566328 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
SMG1-212ENST00000566328 CTC1Q2NKJ3 1217 aa6.88□□□□□ -1.31
SMG1-212ENST00000566328 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
SMG1-212ENST00000566328 TTC24A2A3L6 582 aaPredicted RBP6.87□□□□□ -1.31
SMG1-212ENST00000566328 AVPP01185 164 aa6.87□□□□□ -1.31
SMG1-212ENST00000566328 AXIN1O15169 862 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms