RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
KARS-206ENST00000566249 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
KARS-206ENST00000566249 POTEMA6NI47 508 aa12.02□□□□□ -0.49
KARS-206ENST00000566249 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
KARS-206ENST00000566249 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
KARS-206ENST00000566249 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
KARS-206ENST00000566249 HRO43593 1189 aa12□□□□□ -0.49
KARS-206ENST00000566249 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
KARS-206ENST00000566249 SWT1Q5T5J6 900 aaKnown RBP12□□□□□ -0.49
KARS-206ENST00000566249 STAC3Q96MF2 364 aa12□□□□□ -0.49
KARS-206ENST00000566249 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
KARS-206ENST00000566249 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
KARS-206ENST00000566249 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
KARS-206ENST00000566249 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
KARS-206ENST00000566249 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
KARS-206ENST00000566249 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
KARS-206ENST00000566249 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
KARS-206ENST00000566249 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
KARS-206ENST00000566249 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
KARS-206ENST00000566249 CD46P15529 392 aa11.94□□□□□ -0.5
KARS-206ENST00000566249 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
KARS-206ENST00000566249 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
KARS-206ENST00000566249 RNF40O75150 1001 aa11.92□□□□□ -0.5
KARS-206ENST00000566249 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
KARS-206ENST00000566249 SLC10A3P09131 477 aa11.9□□□□□ -0.5
KARS-206ENST00000566249 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
KARS-206ENST00000566249 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
KARS-206ENST00000566249 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
KARS-206ENST00000566249 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
KARS-206ENST00000566249 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
KARS-206ENST00000566249 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
KARS-206ENST00000566249 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
KARS-206ENST00000566249 WNT2BQ93097 391 aa11.86□□□□□ -0.51
KARS-206ENST00000566249 GCGRP47871 477 aa11.85□□□□□ -0.51
KARS-206ENST00000566249 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
KARS-206ENST00000566249 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
KARS-206ENST00000566249 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
KARS-206ENST00000566249 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
KARS-206ENST00000566249 BCAMP50895 628 aa11.84□□□□□ -0.51
KARS-206ENST00000566249 KDM4AO75164 1064 aa11.83□□□□□ -0.52
KARS-206ENST00000566249 CFHP08603 1231 aa11.83□□□□□ -0.52
KARS-206ENST00000566249 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
KARS-206ENST00000566249 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
KARS-206ENST00000566249 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
KARS-206ENST00000566249 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
KARS-206ENST00000566249 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
KARS-206ENST00000566249 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
KARS-206ENST00000566249 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
KARS-206ENST00000566249 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
KARS-206ENST00000566249 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
KARS-206ENST00000566249 PPP4CP60510 307 aa11.8□□□□□ -0.52
KARS-206ENST00000566249 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
KARS-206ENST00000566249 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
KARS-206ENST00000566249 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
KARS-206ENST00000566249 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
KARS-206ENST00000566249 USP46P62068 366 aa11.78□□□□□ -0.52
KARS-206ENST00000566249 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
KARS-206ENST00000566249 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
KARS-206ENST00000566249 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
KARS-206ENST00000566249 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
KARS-206ENST00000566249 HOXA2O43364 376 aa11.76□□□□□ -0.53
KARS-206ENST00000566249 NDUFV2P19404 249 aa11.76□□□□□ -0.53
KARS-206ENST00000566249 FUT2Q10981 343 aa11.76□□□□□ -0.53
KARS-206ENST00000566249 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
KARS-206ENST00000566249 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
KARS-206ENST00000566249 SPTLC1O15269 473 aa11.74□□□□□ -0.53
KARS-206ENST00000566249 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
KARS-206ENST00000566249 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
KARS-206ENST00000566249 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
KARS-206ENST00000566249 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
KARS-206ENST00000566249 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
KARS-206ENST00000566249 APLP1P51693 650 aa11.72□□□□□ -0.53
KARS-206ENST00000566249 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
KARS-206ENST00000566249 HLA-CQ95604 372 aa11.72□□□□□ -0.53
KARS-206ENST00000566249 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
KARS-206ENST00000566249 FDX1P10109 184 aa11.71□□□□□ -0.53
KARS-206ENST00000566249 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
KARS-206ENST00000566249 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
KARS-206ENST00000566249 GJA5P36382 358 aa11.7□□□□□ -0.54
KARS-206ENST00000566249 PTPN5P54829 565 aa11.69□□□□□ -0.54
KARS-206ENST00000566249 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
KARS-206ENST00000566249 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
KARS-206ENST00000566249 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
KARS-206ENST00000566249 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
KARS-206ENST00000566249 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
KARS-206ENST00000566249 MORN1Q5T089 497 aa11.66□□□□□ -0.54
KARS-206ENST00000566249 QPCTQ16769 361 aa11.65□□□□□ -0.54
KARS-206ENST00000566249 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
KARS-206ENST00000566249 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
KARS-206ENST00000566249 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
KARS-206ENST00000566249 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 LILRB3O75022 631 aa11.63□□□□□ -0.55
KARS-206ENST00000566249 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 PRPF38BQ5VTL8 546 aaKnown RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
KARS-206ENST00000566249 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-206ENST00000566249 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
KARS-206ENST00000566249 HRCP23327 699 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms