RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
FANCA-219ENST00000566133 RPRD2Q5VT52 1461 aaKnown RBP17.15■□□□□ 0.34
FANCA-219ENST00000566133 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
FANCA-219ENST00000566133 TET3O43151 1660 aa17.13■□□□□ 0.33
FANCA-219ENST00000566133 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
FANCA-219ENST00000566133 RIMS2Q9UQ26 1411 aa17.12■□□□□ 0.33
FANCA-219ENST00000566133 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
FANCA-219ENST00000566133 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
FANCA-219ENST00000566133 ADGRB3O60242 1522 aa17.11■□□□□ 0.33
FANCA-219ENST00000566133 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
FANCA-219ENST00000566133 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
FANCA-219ENST00000566133 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
FANCA-219ENST00000566133 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
FANCA-219ENST00000566133 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
FANCA-219ENST00000566133 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
FANCA-219ENST00000566133 MSH6P52701 1360 aa17.05■□□□□ 0.32
FANCA-219ENST00000566133 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
FANCA-219ENST00000566133 UNC13BO14795 1591 aa17.04■□□□□ 0.32
FANCA-219ENST00000566133 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
FANCA-219ENST00000566133 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
FANCA-219ENST00000566133 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
FANCA-219ENST00000566133 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.32
FANCA-219ENST00000566133 E9PCH4 1651 aa17.01■□□□□ 0.31
FANCA-219ENST00000566133 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
FANCA-219ENST00000566133 TRIM52Q96A61 297 aa17■□□□□ 0.31
FANCA-219ENST00000566133 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
FANCA-219ENST00000566133 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
FANCA-219ENST00000566133 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
FANCA-219ENST00000566133 ADAMTS13Q76LX8 1427 aa16.98■□□□□ 0.31
FANCA-219ENST00000566133 ATF3P18847 181 aa16.98■□□□□ 0.31
FANCA-219ENST00000566133 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
FANCA-219ENST00000566133 PIK3R4Q99570 1358 aa16.97■□□□□ 0.31
FANCA-219ENST00000566133 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.31
FANCA-219ENST00000566133 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.31
FANCA-219ENST00000566133 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
FANCA-219ENST00000566133 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.3
FANCA-219ENST00000566133 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
FANCA-219ENST00000566133 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
FANCA-219ENST00000566133 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
FANCA-219ENST00000566133 NAIPQ13075 1403 aa16.92■□□□□ 0.3
FANCA-219ENST00000566133 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
FANCA-219ENST00000566133 JCADQ9P266 1359 aa16.89■□□□□ 0.3
FANCA-219ENST00000566133 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
FANCA-219ENST00000566133 METP08581 1390 aa16.89■□□□□ 0.29
FANCA-219ENST00000566133 TRPM2O94759 1503 aa16.87■□□□□ 0.29
FANCA-219ENST00000566133 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
FANCA-219ENST00000566133 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
FANCA-219ENST00000566133 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
FANCA-219ENST00000566133 FOXD1Q16676 465 aa16.84■□□□□ 0.29
FANCA-219ENST00000566133 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
FANCA-219ENST00000566133 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
FANCA-219ENST00000566133 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
FANCA-219ENST00000566133 RPGRIP1LQ68CZ1 1315 aa16.83■□□□□ 0.28
FANCA-219ENST00000566133 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
FANCA-219ENST00000566133 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
FANCA-219ENST00000566133 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
FANCA-219ENST00000566133 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
FANCA-219ENST00000566133 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
FANCA-219ENST00000566133 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
FANCA-219ENST00000566133 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
FANCA-219ENST00000566133 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
FANCA-219ENST00000566133 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
FANCA-219ENST00000566133 NRXN3Q9Y4C0 1643 aa16.79■□□□□ 0.28
FANCA-219ENST00000566133 DDX17Q92841 729 aaKnown RBP16.79■□□□□ 0.28
FANCA-219ENST00000566133 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
FANCA-219ENST00000566133 ZNF772Q68DY9 489 aaPredicted RBP16.78■□□□□ 0.28
FANCA-219ENST00000566133 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
FANCA-219ENST00000566133 DCCP43146 1447 aa16.77■□□□□ 0.27
FANCA-219ENST00000566133 KIF1BO60333 1816 aa16.77■□□□□ 0.27
FANCA-219ENST00000566133 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
FANCA-219ENST00000566133 MST1RQ04912 1400 aa16.76■□□□□ 0.27
FANCA-219ENST00000566133 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
FANCA-219ENST00000566133 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
FANCA-219ENST00000566133 ADGRF5Q8IZF2 1346 aa16.73■□□□□ 0.27
FANCA-219ENST00000566133 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
FANCA-219ENST00000566133 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
FANCA-219ENST00000566133 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
FANCA-219ENST00000566133 STK26Q9P289 416 aa16.72■□□□□ 0.27
FANCA-219ENST00000566133 LRP6O75581 1613 aa16.71■□□□□ 0.27
FANCA-219ENST00000566133 RXRBP28702 533 aa16.71■□□□□ 0.27
FANCA-219ENST00000566133 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
FANCA-219ENST00000566133 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
FANCA-219ENST00000566133 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
FANCA-219ENST00000566133 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
FANCA-219ENST00000566133 C1orf167Q5SNV9 1468 aa16.68■□□□□ 0.26
FANCA-219ENST00000566133 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
FANCA-219ENST00000566133 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
FANCA-219ENST00000566133 WAPLQ7Z5K2 1190 aa16.68■□□□□ 0.26
FANCA-219ENST00000566133 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
FANCA-219ENST00000566133 AFF2P51816 1311 aa16.68■□□□□ 0.26
FANCA-219ENST00000566133 ACIN1Q9UKV3 1341 aaKnown RBP16.68■□□□□ 0.26
FANCA-219ENST00000566133 QTRT2Q9H974 415 aaKnown RBP16.67■□□□□ 0.26
FANCA-219ENST00000566133 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
FANCA-219ENST00000566133 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
FANCA-219ENST00000566133 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
FANCA-219ENST00000566133 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
FANCA-219ENST00000566133 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
FANCA-219ENST00000566133 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
FANCA-219ENST00000566133 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
FANCA-219ENST00000566133 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms