RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SLC10A3P09131 477 aa8.13□□□□□ -1.11
LINC00561-201ENST00000565815 NDUFV2P19404 249 aa8.13□□□□□ -1.11
LINC00561-201ENST00000565815 PSDA5PKW4 1024 aaPredicted RBP8.12□□□□□ -1.11
LINC00561-201ENST00000565815 ARHGAP33O14559 1287 aa8.12□□□□□ -1.11
LINC00561-201ENST00000565815 QPCTQ16769 361 aa8.12□□□□□ -1.11
LINC00561-201ENST00000565815 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
LINC00561-201ENST00000565815 ATP1B4Q9UN42 357 aaPredicted RBP8.12□□□□□ -1.11
LINC00561-201ENST00000565815 NBPF26B4DH59 902 aa8.11□□□□□ -1.11
LINC00561-201ENST00000565815 RNF40O75150 1001 aa8.11□□□□□ -1.11
LINC00561-201ENST00000565815 CD46P15529 392 aa8.11□□□□□ -1.11
LINC00561-201ENST00000565815 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
LINC00561-201ENST00000565815 DAXXQ9UER7 740 aaPredicted RBP8.1□□□□□ -1.11
LINC00561-201ENST00000565815 VPS9D1Q9Y2B5 631 aa8.1□□□□□ -1.11
LINC00561-201ENST00000565815 MOXD2PA6NHM9 499 aa8.1□□□□□ -1.11
LINC00561-201ENST00000565815 DNAJB2P25686 324 aa8.1□□□□□ -1.11
LINC00561-201ENST00000565815 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
LINC00561-201ENST00000565815 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
LINC00561-201ENST00000565815 SH3D19Q5HYK7 790 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 PACS2Q86VP3 889 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 RDH13Q8NBN7 331 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
LINC00561-201ENST00000565815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.12
LINC00561-201ENST00000565815 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.09□□□□□ -1.12
LINC00561-201ENST00000565815 ARID3CA6NKF2 412 aa8.08□□□□□ -1.12
LINC00561-201ENST00000565815 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
LINC00561-201ENST00000565815 ZNF687Q8N1G0 1237 aa8.07□□□□□ -1.12
LINC00561-201ENST00000565815 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
LINC00561-201ENST00000565815 RABGEF1Q9UJ41 708 aa8.07□□□□□ -1.12
LINC00561-201ENST00000565815 CABLES1Q8TDN4 633 aa8.06□□□□□ -1.12
LINC00561-201ENST00000565815 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
LINC00561-201ENST00000565815 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
LINC00561-201ENST00000565815 C1orf115Q9H7X2 142 aa8.05□□□□□ -1.12
LINC00561-201ENST00000565815 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
LINC00561-201ENST00000565815 PCDHGC3Q9UN70 934 aa8.05□□□□□ -1.12
LINC00561-201ENST00000565815 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
LINC00561-201ENST00000565815 FUT2Q10981 343 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 MCM6Q14566 821 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
LINC00561-201ENST00000565815 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 SNRKQ9NRH2 765 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
LINC00561-201ENST00000565815 LSM11P83369 360 aaKnown RBP eCLIP8.02□□□□□ -1.12
LINC00561-201ENST00000565815 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.12
LINC00561-201ENST00000565815 ZFRQ96KR1 1074 aaKnown RBP8.02□□□□□ -1.12
LINC00561-201ENST00000565815 KCNH8Q96L42 1107 aa8.02□□□□□ -1.12
LINC00561-201ENST00000565815 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
LINC00561-201ENST00000565815 RSBN1LQ6PCB5 846 aaPredicted RBP8.02□□□□□ -1.13
LINC00561-201ENST00000565815 BCAMP50895 628 aa8.01□□□□□ -1.13
LINC00561-201ENST00000565815 FAM98CQ17RN3 349 aaKnown RBP8.01□□□□□ -1.13
LINC00561-201ENST00000565815 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
LINC00561-201ENST00000565815 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
LINC00561-201ENST00000565815 HOXA2O43364 376 aa8.01□□□□□ -1.13
LINC00561-201ENST00000565815 RFC5P40937 340 aa8.01□□□□□ -1.13
LINC00561-201ENST00000565815 KDM4AO75164 1064 aa8□□□□□ -1.13
LINC00561-201ENST00000565815 CFHP08603 1231 aa8□□□□□ -1.13
LINC00561-201ENST00000565815 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
LINC00561-201ENST00000565815 HRO43593 1189 aa7.99□□□□□ -1.13
LINC00561-201ENST00000565815 GCGRP47871 477 aa7.99□□□□□ -1.13
LINC00561-201ENST00000565815 SULF1Q8IWU6 871 aa7.99□□□□□ -1.13
LINC00561-201ENST00000565815 ARID3AQ99856 593 aa7.98□□□□□ -1.13
LINC00561-201ENST00000565815 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
LINC00561-201ENST00000565815 HRCP23327 699 aa7.97□□□□□ -1.13
LINC00561-201ENST00000565815 MRPL50Q8N5N7 158 aaKnown RBP7.97□□□□□ -1.13
LINC00561-201ENST00000565815 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
LINC00561-201ENST00000565815 UNC13AQ9UPW8 1703 aa7.97□□□□□ -1.13
LINC00561-201ENST00000565815 ZMYND15Q9H091 742 aa7.96□□□□□ -1.13
LINC00561-201ENST00000565815 PBX2P40425 430 aa7.96□□□□□ -1.14
LINC00561-201ENST00000565815 MTMR14Q8NCE2 650 aa7.96□□□□□ -1.14
LINC00561-201ENST00000565815 SLC4A5Q9BY07 1137 aa7.96□□□□□ -1.14
LINC00561-201ENST00000565815 SPTLC1O15269 473 aa7.95□□□□□ -1.14
LINC00561-201ENST00000565815 TSC1Q92574 1164 aa7.95□□□□□ -1.14
LINC00561-201ENST00000565815 BICRAQ9NZM4 1560 aa7.95□□□□□ -1.14
LINC00561-201ENST00000565815 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 FDX1P10109 184 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 LILRB3O75022 631 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 APLP1P51693 650 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
LINC00561-201ENST00000565815 AP1G2O75843 785 aa7.93□□□□□ -1.14
LINC00561-201ENST00000565815 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
LINC00561-201ENST00000565815 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
LINC00561-201ENST00000565815 NUTM2BA6NNL0 878 aaPredicted RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 NUTM2EB1AL46 878 aaPredicted RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
LINC00561-201ENST00000565815 NUTM2AQ8IVF1 878 aaPredicted RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 UBTFP17480 764 aaKnown RBP7.92□□□□□ -1.14
LINC00561-201ENST00000565815 LRRN4Q8WUT4 740 aa7.92□□□□□ -1.14
LINC00561-201ENST00000565815 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
LINC00561-201ENST00000565815 WBP1LQ9NX94 342 aa7.92□□□□□ -1.14
LINC00561-201ENST00000565815 SLC27A5Q9Y2P5 690 aa7.91□□□□□ -1.14
LINC00561-201ENST00000565815 CECR2Q9BXF3 1484 aa7.91□□□□□ -1.14
LINC00561-201ENST00000565815 POTEMA6NI47 508 aa7.91□□□□□ -1.14
LINC00561-201ENST00000565815 LRCH3Q96II8 777 aa7.91□□□□□ -1.14
LINC00561-201ENST00000565815 TBC1D2BQ9UPU7 963 aa7.91□□□□□ -1.14
LINC00561-201ENST00000565815 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms