RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
MARK3-220ENST00000560417 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
MARK3-220ENST00000560417 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
MARK3-220ENST00000560417 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
MARK3-220ENST00000560417 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
MARK3-220ENST00000560417 FLIIQ13045 1269 aa11.24□□□□□ -0.61
MARK3-220ENST00000560417 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
MARK3-220ENST00000560417 HS3ST6Q96QI5 342 aa11.23□□□□□ -0.61
MARK3-220ENST00000560417 SEPT9Q9UHD8 586 aaPredicted RBP11.23□□□□□ -0.61
MARK3-220ENST00000560417 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
MARK3-220ENST00000560417 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
MARK3-220ENST00000560417 ZMYND15Q9H091 742 aa11.22□□□□□ -0.61
MARK3-220ENST00000560417 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
MARK3-220ENST00000560417 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
MARK3-220ENST00000560417 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
MARK3-220ENST00000560417 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
MARK3-220ENST00000560417 TK2O00142 265 aa11.2□□□□□ -0.62
MARK3-220ENST00000560417 SPTLC1O15269 473 aa11.2□□□□□ -0.62
MARK3-220ENST00000560417 SLC10A3P09131 477 aa11.2□□□□□ -0.62
MARK3-220ENST00000560417 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
MARK3-220ENST00000560417 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
MARK3-220ENST00000560417 GJA5P36382 358 aa11.19□□□□□ -0.62
MARK3-220ENST00000560417 PPP2R2DQ66LE6 453 aa11.19□□□□□ -0.62
MARK3-220ENST00000560417 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
MARK3-220ENST00000560417 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
MARK3-220ENST00000560417 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
MARK3-220ENST00000560417 MOXD2PA6NHM9 499 aa11.18□□□□□ -0.62
MARK3-220ENST00000560417 GCGRP47871 477 aa11.18□□□□□ -0.62
MARK3-220ENST00000560417 RDH13Q8NBN7 331 aa11.18□□□□□ -0.62
MARK3-220ENST00000560417 KDM4AO75164 1064 aa11.16□□□□□ -0.62
MARK3-220ENST00000560417 MCM6Q14566 821 aa11.16□□□□□ -0.62
MARK3-220ENST00000560417 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
MARK3-220ENST00000560417 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
MARK3-220ENST00000560417 NDUFV2P19404 249 aa11.14□□□□□ -0.63
MARK3-220ENST00000560417 RFC5P40937 340 aa11.14□□□□□ -0.63
MARK3-220ENST00000560417 USP46P62068 366 aa11.14□□□□□ -0.63
MARK3-220ENST00000560417 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
MARK3-220ENST00000560417 HOXA2O43364 376 aa11.13□□□□□ -0.63
MARK3-220ENST00000560417 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
MARK3-220ENST00000560417 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.635e-18■■■■■ 28.9
MARK3-220ENST00000560417 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
MARK3-220ENST00000560417 HRO43593 1189 aa11.12□□□□□ -0.63
MARK3-220ENST00000560417 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
MARK3-220ENST00000560417 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
MARK3-220ENST00000560417 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
MARK3-220ENST00000560417 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
MARK3-220ENST00000560417 PCDHB15Q9Y5E8 787 aa11.12□□□□□ -0.63
MARK3-220ENST00000560417 LILRB3O75022 631 aa11.11□□□□□ -0.63
MARK3-220ENST00000560417 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
MARK3-220ENST00000560417 QPCTQ16769 361 aa11.1□□□□□ -0.63
MARK3-220ENST00000560417 TMEM259Q4ZIN3 620 aa11.09□□□□□ -0.63
MARK3-220ENST00000560417 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
MARK3-220ENST00000560417 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
MARK3-220ENST00000560417 A6NJR5 290 aa11.08□□□□□ -0.64
MARK3-220ENST00000560417 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
MARK3-220ENST00000560417 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
MARK3-220ENST00000560417 PCDHGC3Q9UN70 934 aa11.07□□□□□ -0.64
MARK3-220ENST00000560417 CFHP08603 1231 aa11.06□□□□□ -0.64
MARK3-220ENST00000560417 FDX1P10109 184 aa11.06□□□□□ -0.64
MARK3-220ENST00000560417 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
MARK3-220ENST00000560417 HRCP23327 699 aa11.05□□□□□ -0.64
MARK3-220ENST00000560417 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
MARK3-220ENST00000560417 HLA-CQ95604 372 aa11.05□□□□□ -0.64
MARK3-220ENST00000560417 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
MARK3-220ENST00000560417 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
MARK3-220ENST00000560417 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
MARK3-220ENST00000560417 FUT2Q10981 343 aa11.04□□□□□ -0.64
MARK3-220ENST00000560417 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
MARK3-220ENST00000560417 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
MARK3-220ENST00000560417 SOCS7O14512 581 aa11.03□□□□□ -0.64
MARK3-220ENST00000560417 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
MARK3-220ENST00000560417 LRCH3Q96II8 777 aa11.02□□□□□ -0.65
MARK3-220ENST00000560417 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
MARK3-220ENST00000560417 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
MARK3-220ENST00000560417 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
MARK3-220ENST00000560417 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
MARK3-220ENST00000560417 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
MARK3-220ENST00000560417 RNF40O75150 1001 aa11□□□□□ -0.65
MARK3-220ENST00000560417 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
MARK3-220ENST00000560417 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
MARK3-220ENST00000560417 MTMR14Q8NCE2 650 aa11□□□□□ -0.65
MARK3-220ENST00000560417 NECTIN2Q92692 538 aa11□□□□□ -0.65
MARK3-220ENST00000560417 POM121Q96HA1 1249 aa11□□□□□ -0.65
MARK3-220ENST00000560417 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
MARK3-220ENST00000560417 MTMR2Q13614 643 aa10.99□□□□□ -0.65
MARK3-220ENST00000560417 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
MARK3-220ENST00000560417 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
MARK3-220ENST00000560417 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
MARK3-220ENST00000560417 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
MARK3-220ENST00000560417 SOWAHBA6NEL2 793 aa10.98□□□□□ -0.65
MARK3-220ENST00000560417 TRAK2O60296 914 aa10.98□□□□□ -0.65
MARK3-220ENST00000560417 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
MARK3-220ENST00000560417 MORN1Q5T089 497 aa10.97□□□□□ -0.65
MARK3-220ENST00000560417 ARXQ96QS3 562 aa10.97□□□□□ -0.65
MARK3-220ENST00000560417 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms