RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.21
IDH3A-217ENST00000559889 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.21
IDH3A-217ENST00000559889 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
IDH3A-217ENST00000559889 KCNA6P17658 529 aa13.7□□□□□ -0.22
IDH3A-217ENST00000559889 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
IDH3A-217ENST00000559889 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
IDH3A-217ENST00000559889 HSPA1LP34931 641 aa13.69□□□□□ -0.22
IDH3A-217ENST00000559889 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
IDH3A-217ENST00000559889 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
IDH3A-217ENST00000559889 XIRP1Q702N8 1843 aaKnown RBP13.68□□□□□ -0.22
IDH3A-217ENST00000559889 DISP3Q9P2K9 1392 aa13.68□□□□□ -0.22
IDH3A-217ENST00000559889 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
IDH3A-217ENST00000559889 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
IDH3A-217ENST00000559889 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
IDH3A-217ENST00000559889 NUTM2DQ5VT03 806 aaPredicted RBP13.66□□□□□ -0.22
IDH3A-217ENST00000559889 PPP1R15AO75807 674 aaPredicted RBP13.66□□□□□ -0.22
IDH3A-217ENST00000559889 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
IDH3A-217ENST00000559889 BCANQ96GW7 911 aa13.66□□□□□ -0.22
IDH3A-217ENST00000559889 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
IDH3A-217ENST00000559889 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
IDH3A-217ENST00000559889 SPHKAPQ2M3C7 1700 aa13.65□□□□□ -0.22
IDH3A-217ENST00000559889 TBX22Q9Y458 520 aa13.65□□□□□ -0.22
IDH3A-217ENST00000559889 NKTRP30414 1462 aaKnown RBP13.64□□□□□ -0.23
IDH3A-217ENST00000559889 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
IDH3A-217ENST00000559889 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
IDH3A-217ENST00000559889 TRPM2O94759 1503 aa13.62□□□□□ -0.23
IDH3A-217ENST00000559889 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
IDH3A-217ENST00000559889 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
IDH3A-217ENST00000559889 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
IDH3A-217ENST00000559889 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
IDH3A-217ENST00000559889 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
IDH3A-217ENST00000559889 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.23
IDH3A-217ENST00000559889 FAM135BQ49AJ0 1406 aa13.58□□□□□ -0.23
IDH3A-217ENST00000559889 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
IDH3A-217ENST00000559889 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
IDH3A-217ENST00000559889 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
IDH3A-217ENST00000559889 SETBP1Q9Y6X0 1596 aa13.57□□□□□ -0.24
IDH3A-217ENST00000559889 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
IDH3A-217ENST00000559889 MSH6P52701 1360 aa13.56□□□□□ -0.24
IDH3A-217ENST00000559889 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
IDH3A-217ENST00000559889 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
IDH3A-217ENST00000559889 FOXD1Q16676 465 aa13.55□□□□□ -0.24
IDH3A-217ENST00000559889 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
IDH3A-217ENST00000559889 METP08581 1390 aa13.54□□□□□ -0.24
IDH3A-217ENST00000559889 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
IDH3A-217ENST00000559889 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
IDH3A-217ENST00000559889 KIF1BO60333 1816 aa13.52□□□□□ -0.24
IDH3A-217ENST00000559889 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
IDH3A-217ENST00000559889 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.25
IDH3A-217ENST00000559889 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
IDH3A-217ENST00000559889 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
IDH3A-217ENST00000559889 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
IDH3A-217ENST00000559889 SETD5Q9C0A6 1442 aa13.49□□□□□ -0.25
IDH3A-217ENST00000559889 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.49□□□□□ -0.25
IDH3A-217ENST00000559889 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
IDH3A-217ENST00000559889 SOCS7O14512 581 aa13.48□□□□□ -0.25
IDH3A-217ENST00000559889 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
IDH3A-217ENST00000559889 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
IDH3A-217ENST00000559889 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
IDH3A-217ENST00000559889 SETD1AO15047 1707 aaKnown RBP13.46□□□□□ -0.25
IDH3A-217ENST00000559889 ATF3P18847 181 aa13.46□□□□□ -0.25
IDH3A-217ENST00000559889 PPLO60437 1756 aa13.45□□□□□ -0.26
IDH3A-217ENST00000559889 DCCP43146 1447 aa13.45□□□□□ -0.26
IDH3A-217ENST00000559889 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
IDH3A-217ENST00000559889 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
IDH3A-217ENST00000559889 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
IDH3A-217ENST00000559889 RGL3Q3MIN7 710 aa13.44□□□□□ -0.26
IDH3A-217ENST00000559889 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
IDH3A-217ENST00000559889 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
IDH3A-217ENST00000559889 RGS17Q9UGC6 210 aaPredicted RBP13.43□□□□□ -0.26
IDH3A-217ENST00000559889 PHLPP1O60346 1717 aa13.43□□□□□ -0.26
IDH3A-217ENST00000559889 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
IDH3A-217ENST00000559889 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
IDH3A-217ENST00000559889 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
IDH3A-217ENST00000559889 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
IDH3A-217ENST00000559889 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
IDH3A-217ENST00000559889 MST1RQ04912 1400 aa13.42□□□□□ -0.26
IDH3A-217ENST00000559889 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
IDH3A-217ENST00000559889 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
IDH3A-217ENST00000559889 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
IDH3A-217ENST00000559889 JCADQ9P266 1359 aa13.4□□□□□ -0.26
IDH3A-217ENST00000559889 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
IDH3A-217ENST00000559889 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
IDH3A-217ENST00000559889 IFT172Q9UG01 1749 aa13.4□□□□□ -0.26
IDH3A-217ENST00000559889 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
IDH3A-217ENST00000559889 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
IDH3A-217ENST00000559889 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
IDH3A-217ENST00000559889 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
IDH3A-217ENST00000559889 TECPR2O15040 1411 aa13.35□□□□□ -0.27
IDH3A-217ENST00000559889 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
IDH3A-217ENST00000559889 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
IDH3A-217ENST00000559889 LRP6O75581 1613 aa13.35□□□□□ -0.27
IDH3A-217ENST00000559889 DDX17Q92841 729 aaKnown RBP13.34□□□□□ -0.27
IDH3A-217ENST00000559889 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
IDH3A-217ENST00000559889 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
IDH3A-217ENST00000559889 NHSL1Q5SYE7 1610 aa13.34□□□□□ -0.27
IDH3A-217ENST00000559889 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
IDH3A-217ENST00000559889 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
IDH3A-217ENST00000559889 STK26Q9P289 416 aa13.33□□□□□ -0.28
IDH3A-217ENST00000559889 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms