RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 SLC26A8Q96RN1 970 aa32.91■■■□□ 2.86
SDR39U1-216ENST00000556175 MYO5BQ9ULV0 1848 aa32.91■■■□□ 2.86
SDR39U1-216ENST00000556175 BCANQ96GW7 911 aa32.9■■■□□ 2.86
SDR39U1-216ENST00000556175 XIRP1Q702N8 1843 aaKnown RBP32.9■■■□□ 2.86
SDR39U1-216ENST00000556175 RIMS2Q9UQ26 1411 aa32.89■■■□□ 2.86
SDR39U1-216ENST00000556175 PLEKHG1Q9ULL1 1385 aa32.88■■■□□ 2.85
SDR39U1-216ENST00000556175 PPP1R15AO75807 674 aaPredicted RBP32.88■■■□□ 2.85
SDR39U1-216ENST00000556175 NWD1Q149M9 1564 aa32.87■■■□□ 2.85
SDR39U1-216ENST00000556175 NKTRP30414 1462 aaKnown RBP32.86■■■□□ 2.85
SDR39U1-216ENST00000556175 RRBP1Q9P2E9 1410 aaKnown RBP32.86■■■□□ 2.85
SDR39U1-216ENST00000556175 TMEM94Q12767 1356 aa32.85■■■□□ 2.85
SDR39U1-216ENST00000556175 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.85■■■□□ 2.85
SDR39U1-216ENST00000556175 CHGAP10645 457 aaKnown RBP32.84■■■□□ 2.85
SDR39U1-216ENST00000556175 MED1Q15648 1581 aaPredicted RBP32.82■■■□□ 2.84
SDR39U1-216ENST00000556175 SOCS7O14512 581 aa32.8■■■□□ 2.84
SDR39U1-216ENST00000556175 PROSER2Q86WR7 435 aaPredicted RBP32.8■■■□□ 2.84
SDR39U1-216ENST00000556175 DIP2AQ14689 1571 aa32.74■■■□□ 2.83
SDR39U1-216ENST00000556175 SPHKAPQ2M3C7 1700 aa32.74■■■□□ 2.83
SDR39U1-216ENST00000556175 CHD2O14647 1828 aaKnown RBP32.73■■■□□ 2.83
SDR39U1-216ENST00000556175 TBX22Q9Y458 520 aa32.73■■■□□ 2.83
SDR39U1-216ENST00000556175 FAM135BQ49AJ0 1406 aa32.73■■■□□ 2.83
SDR39U1-216ENST00000556175 SENP3Q9H4L4 574 aaPredicted RBP32.72■■■□□ 2.83
SDR39U1-216ENST00000556175 MSH6P52701 1360 aa32.7■■■□□ 2.82
SDR39U1-216ENST00000556175 NAIPQ13075 1403 aa32.69■■■□□ 2.82
SDR39U1-216ENST00000556175 ADAMTS13Q76LX8 1427 aa32.68■■■□□ 2.82
SDR39U1-216ENST00000556175 PIK3R4Q99570 1358 aa32.67■■■□□ 2.82
SDR39U1-216ENST00000556175 NUTM2DQ5VT03 806 aaPredicted RBP32.66■■■□□ 2.82
SDR39U1-216ENST00000556175 RBM33Q96EV2 1170 aaKnown RBP32.66■■■□□ 2.82
SDR39U1-216ENST00000556175 PHF23Q9BUL5 403 aaPredicted RBP32.64■■■□□ 2.82
SDR39U1-216ENST00000556175 NCOA3Q9Y6Q9 1424 aa32.63■■■□□ 2.81
SDR39U1-216ENST00000556175 TRPM2O94759 1503 aa32.62■■■□□ 2.81
SDR39U1-216ENST00000556175 ROBO1Q9Y6N7 1651 aa32.62■■■□□ 2.81
SDR39U1-216ENST00000556175 HFM1A2PYH4 1435 aa32.61■■■□□ 2.81
SDR39U1-216ENST00000556175 ZNF326Q5BKZ1 582 aaKnown RBP32.57■■■□□ 2.8
SDR39U1-216ENST00000556175 SLAIN2Q9P270 581 aa32.55■■■□□ 2.8
SDR39U1-216ENST00000556175 CLTCL1P53675 1640 aa32.55■■■□□ 2.8
SDR39U1-216ENST00000556175 SETBP1Q9Y6X0 1596 aa32.54■■■□□ 2.8
SDR39U1-216ENST00000556175 C14orf37Q86TY3 774 aa32.54■■■□□ 2.8
SDR39U1-216ENST00000556175 TRIM52Q96A61 297 aa32.51■■■□□ 2.79
SDR39U1-216ENST00000556175 KIF1BO60333 1816 aa32.5■■■□□ 2.79
SDR39U1-216ENST00000556175 NRXN3Q9Y4C0 1643 aa32.5■■■□□ 2.79
SDR39U1-216ENST00000556175 AMOTL2Q9Y2J4 779 aa32.49■■■□□ 2.79
SDR39U1-216ENST00000556175 NEXMIFQ5QGS0 1516 aa32.47■■■□□ 2.79
SDR39U1-216ENST00000556175 C19orf44Q9H6X5 657 aa32.47■■■□□ 2.79
SDR39U1-216ENST00000556175 CADPS2Q86UW7 1296 aa32.46■■■□□ 2.79
SDR39U1-216ENST00000556175 PTPRUQ92729 1446 aa32.45■■■□□ 2.79
SDR39U1-216ENST00000556175 XRN1Q8IZH2 1706 aaKnown RBP32.44■■■□□ 2.78
SDR39U1-216ENST00000556175 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.44■■■□□ 2.78
SDR39U1-216ENST00000556175 SLC4A1APQ9BWU0 796 aaKnown RBP32.44■■■□□ 2.78
SDR39U1-216ENST00000556175 PHLPP1O60346 1717 aa32.43■■■□□ 2.78
SDR39U1-216ENST00000556175 ATF3P18847 181 aa32.43■■■□□ 2.78
SDR39U1-216ENST00000556175 DCCP43146 1447 aa32.39■■■□□ 2.78
SDR39U1-216ENST00000556175 METP08581 1390 aa32.36■■■□□ 2.77
SDR39U1-216ENST00000556175 JCADQ9P266 1359 aa32.35■■■□□ 2.77
SDR39U1-216ENST00000556175 VGFO15240 615 aaPredicted RBP32.34■■■□□ 2.77
SDR39U1-216ENST00000556175 RPGRIP1LQ68CZ1 1315 aa32.33■■■□□ 2.77
SDR39U1-216ENST00000556175 COL16A1Q07092 1604 aaPredicted RBP32.33■■■□□ 2.77
SDR39U1-216ENST00000556175 AHDC1Q5TGY3 1603 aaPredicted RBP32.31■■■□□ 2.76
SDR39U1-216ENST00000556175 RGS17Q9UGC6 210 aaPredicted RBP32.28■■■□□ 2.76
SDR39U1-216ENST00000556175 ADGRL3Q9HAR2 1447 aa32.26■■■□□ 2.75
SDR39U1-216ENST00000556175 ACIN1Q9UKV3 1341 aaKnown RBP32.25■■■□□ 2.75
SDR39U1-216ENST00000556175 PPLO60437 1756 aa32.24■■■□□ 2.75
SDR39U1-216ENST00000556175 CCDC144AA2RUR9 1427 aa32.24■■■□□ 2.75
SDR39U1-216ENST00000556175 BRINP3Q76B58 766 aa32.23■■■□□ 2.75
SDR39U1-216ENST00000556175 PTCH1Q13635 1447 aa32.23■■■□□ 2.75
SDR39U1-216ENST00000556175 SETD1AO15047 1707 aaKnown RBP32.23■■■□□ 2.75
SDR39U1-216ENST00000556175 MST1RQ04912 1400 aa32.22■■■□□ 2.75
SDR39U1-216ENST00000556175 SPATA31A6Q5VVP1 1343 aa32.21■■■□□ 2.75
SDR39U1-216ENST00000556175 ASXL1Q8IXJ9 1541 aa32.21■■■□□ 2.75
SDR39U1-216ENST00000556175 FOXD1Q16676 465 aa32.2■■■□□ 2.75
SDR39U1-216ENST00000556175 MPHOSPH9Q99550 1183 aa32.19■■■□□ 2.74
SDR39U1-216ENST00000556175 NALCNQ8IZF0 1738 aa32.19■■■□□ 2.74
SDR39U1-216ENST00000556175 PRAG1Q86YV5 1406 aa32.18■■■□□ 2.74
SDR39U1-216ENST00000556175 SHPRHQ149N8 1683 aa32.18■■■□□ 2.74
SDR39U1-216ENST00000556175 NHSL1Q5SYE7 1610 aa32.12■■■□□ 2.73
SDR39U1-216ENST00000556175 SPATA31E1Q6ZUB1 1445 aa32.11■■■□□ 2.73
SDR39U1-216ENST00000556175 ROBO2Q9HCK4 1378 aa32.11■■■□□ 2.73
SDR39U1-216ENST00000556175 POTEAQ6S8J7 498 aa32.11■■■□□ 2.73
SDR39U1-216ENST00000556175 SETD5Q9C0A6 1442 aa32.1■■■□□ 2.73
SDR39U1-216ENST00000556175 ANKRD30BQ9BXX2 1392 aa32.1■■■□□ 2.73
SDR39U1-216ENST00000556175 LRP6O75581 1613 aa32.09■■■□□ 2.73
SDR39U1-216ENST00000556175 MEX3CQ5U5Q3 659 aaKnown RBP32.09■■■□□ 2.73
SDR39U1-216ENST00000556175 IFT172Q9UG01 1749 aa32.06■■■□□ 2.72
SDR39U1-216ENST00000556175 RGL3Q3MIN7 710 aa32.06■■■□□ 2.72
SDR39U1-216ENST00000556175 C1orf167Q5SNV9 1468 aa32.04■■■□□ 2.72
SDR39U1-216ENST00000556175 LRRC59Q96AG4 307 aaKnown RBP32.04■■■□□ 2.72
SDR39U1-216ENST00000556175 ADGRF5Q8IZF2 1346 aa32.03■■■□□ 2.72
SDR39U1-216ENST00000556175 ZNF772Q68DY9 489 aaPredicted RBP32■■■□□ 2.71
SDR39U1-216ENST00000556175 LAMC1P11047 1609 aa31.97■■■□□ 2.71
SDR39U1-216ENST00000556175 TECPR2O15040 1411 aa31.97■■■□□ 2.71
SDR39U1-216ENST00000556175 PIK3C2GO75747 1445 aa31.97■■■□□ 2.71
SDR39U1-216ENST00000556175 CDC42BPGQ6DT37 1551 aa31.97■■■□□ 2.71
SDR39U1-216ENST00000556175 RAB3GAP2Q9H2M9 1393 aa31.95■■■□□ 2.71
SDR39U1-216ENST00000556175 NUTM2BA6NNL0 878 aaPredicted RBP31.95■■■□□ 2.71
SDR39U1-216ENST00000556175 NUTM2EB1AL46 878 aaPredicted RBP31.95■■■□□ 2.71
SDR39U1-216ENST00000556175 NUTM2AQ8IVF1 878 aaPredicted RBP31.95■■■□□ 2.71
SDR39U1-216ENST00000556175 LRPPRCP42704 1394 aaKnown RBP31.94■■■□□ 2.7
SDR39U1-216ENST00000556175 DDX17Q92841 729 aaKnown RBP31.93■■■□□ 2.7
SDR39U1-216ENST00000556175 KNDC1Q76NI1 1749 aa31.92■■■□□ 2.7
SDR39U1-216ENST00000556175 PNPLA6Q8IY17 1366 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms