RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 KDM5AP29375 1690 aaKnown RBP29.05■■■□□ 2.24
LETMD1-224ENST00000550446 ADGRB3O60242 1522 aa29.05■■■□□ 2.24
LETMD1-224ENST00000550446 TET3O43151 1660 aa29.04■■■□□ 2.24
LETMD1-224ENST00000550446 ROCK1Q13464 1354 aa29.02■■■□□ 2.24
LETMD1-224ENST00000550446 NUTM2DQ5VT03 806 aaPredicted RBP28.99■■■□□ 2.23
LETMD1-224ENST00000550446 RIMS2Q9UQ26 1411 aa28.99■■■□□ 2.23
LETMD1-224ENST00000550446 NUP155O75694 1391 aa28.98■■■□□ 2.23
LETMD1-224ENST00000550446 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.96■■■□□ 2.23
LETMD1-224ENST00000550446 PLEKHG1Q9ULL1 1385 aa28.96■■■□□ 2.23
LETMD1-224ENST00000550446 XIRP1Q702N8 1843 aaKnown RBP28.96■■■□□ 2.23
LETMD1-224ENST00000550446 ZFYVE9O95405 1425 aa28.95■■■□□ 2.23
LETMD1-224ENST00000550446 FAM135BQ49AJ0 1406 aa28.95■■■□□ 2.23
LETMD1-224ENST00000550446 TBX22Q9Y458 520 aa28.93■■■□□ 2.22
LETMD1-224ENST00000550446 UNC13BO14795 1591 aa28.92■■■□□ 2.22
LETMD1-224ENST00000550446 SLAIN2Q9P270 581 aa28.89■■■□□ 2.22
LETMD1-224ENST00000550446 TMEM131LA2VDJ0 1609 aa28.89■■■□□ 2.22
LETMD1-224ENST00000550446 MSH6P52701 1360 aa28.88■■■□□ 2.21
LETMD1-224ENST00000550446 GCC2Q8IWJ2 1684 aa28.87■■■□□ 2.21
LETMD1-224ENST00000550446 NKTRP30414 1462 aaKnown RBP28.87■■■□□ 2.21
LETMD1-224ENST00000550446 MYO5BQ9ULV0 1848 aa28.85■■■□□ 2.21
LETMD1-224ENST00000550446 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
LETMD1-224ENST00000550446 E9PCH4 1651 aa28.85■■■□□ 2.21
LETMD1-224ENST00000550446 NWD1Q149M9 1564 aa28.83■■■□□ 2.21
LETMD1-224ENST00000550446 RGS17Q9UGC6 210 aaPredicted RBP28.82■■■□□ 2.2
LETMD1-224ENST00000550446 IQGAP3Q86VI3 1631 aa28.82■■■□□ 2.2
LETMD1-224ENST00000550446 ADAMTS13Q76LX8 1427 aa28.78■■■□□ 2.2
LETMD1-224ENST00000550446 ZNF326Q5BKZ1 582 aaKnown RBP28.77■■■□□ 2.2
LETMD1-224ENST00000550446 AMOTL2Q9Y2J4 779 aa28.77■■■□□ 2.2
LETMD1-224ENST00000550446 ROBO1Q9Y6N7 1651 aa28.77■■■□□ 2.2
LETMD1-224ENST00000550446 CHD2O14647 1828 aaKnown RBP28.75■■■□□ 2.19
LETMD1-224ENST00000550446 C19orf44Q9H6X5 657 aa28.74■■■□□ 2.19
LETMD1-224ENST00000550446 ATF3P18847 181 aa28.73■■■□□ 2.19
LETMD1-224ENST00000550446 NCOA3Q9Y6Q9 1424 aa28.72■■■□□ 2.19
LETMD1-224ENST00000550446 PIK3R4Q99570 1358 aa28.72■■■□□ 2.19
LETMD1-224ENST00000550446 CADPS2Q86UW7 1296 aa28.71■■■□□ 2.19
LETMD1-224ENST00000550446 POTEAQ6S8J7 498 aa28.67■■■□□ 2.18
LETMD1-224ENST00000550446 TRIM52Q96A61 297 aa28.66■■■□□ 2.18
LETMD1-224ENST00000550446 PTPRUQ92729 1446 aa28.66■■■□□ 2.18
LETMD1-224ENST00000550446 RRBP1Q9P2E9 1410 aaKnown RBP28.66■■■□□ 2.18
LETMD1-224ENST00000550446 DIP2AQ14689 1571 aa28.65■■■□□ 2.18
LETMD1-224ENST00000550446 JCADQ9P266 1359 aa28.64■■■□□ 2.18
LETMD1-224ENST00000550446 TRPM2O94759 1503 aa28.63■■■□□ 2.17
LETMD1-224ENST00000550446 NAIPQ13075 1403 aa28.62■■■□□ 2.17
LETMD1-224ENST00000550446 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
LETMD1-224ENST00000550446 METP08581 1390 aa28.59■■■□□ 2.17
LETMD1-224ENST00000550446 SPHKAPQ2M3C7 1700 aa28.57■■■□□ 2.16
LETMD1-224ENST00000550446 BRINP3Q76B58 766 aa28.56■■■□□ 2.16
LETMD1-224ENST00000550446 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.55■■■□□ 2.16
LETMD1-224ENST00000550446 SLC4A1APQ9BWU0 796 aaKnown RBP28.54■■■□□ 2.16
LETMD1-224ENST00000550446 MEX3CQ5U5Q3 659 aaKnown RBP28.53■■■□□ 2.16
LETMD1-224ENST00000550446 SETBP1Q9Y6X0 1596 aa28.52■■■□□ 2.16
LETMD1-224ENST00000550446 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
LETMD1-224ENST00000550446 SPATA31A6Q5VVP1 1343 aa28.5■■■□□ 2.15
LETMD1-224ENST00000550446 VGFO15240 615 aaPredicted RBP28.5■■■□□ 2.15
LETMD1-224ENST00000550446 NRXN3Q9Y4C0 1643 aa28.5■■■□□ 2.15
LETMD1-224ENST00000550446 COL16A1Q07092 1604 aaPredicted RBP28.49■■■□□ 2.15
LETMD1-224ENST00000550446 HFM1A2PYH4 1435 aa28.48■■■□□ 2.15
LETMD1-224ENST00000550446 NEXMIFQ5QGS0 1516 aa28.46■■■□□ 2.15
LETMD1-224ENST00000550446 DCCP43146 1447 aa28.45■■■□□ 2.15
LETMD1-224ENST00000550446 NUTM2BA6NNL0 878 aaPredicted RBP28.45■■■□□ 2.14
LETMD1-224ENST00000550446 NUTM2EB1AL46 878 aaPredicted RBP28.45■■■□□ 2.14
LETMD1-224ENST00000550446 NUTM2AQ8IVF1 878 aaPredicted RBP28.45■■■□□ 2.14
LETMD1-224ENST00000550446 FOXD1Q16676 465 aa28.44■■■□□ 2.14
LETMD1-224ENST00000550446 XRN1Q8IZH2 1706 aaKnown RBP28.43■■■□□ 2.14
LETMD1-224ENST00000550446 AHDC1Q5TGY3 1603 aaPredicted RBP28.43■■■□□ 2.14
LETMD1-224ENST00000550446 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
LETMD1-224ENST00000550446 MST1RQ04912 1400 aa28.42■■■□□ 2.14
LETMD1-224ENST00000550446 LRP6O75581 1613 aa28.41■■■□□ 2.14
LETMD1-224ENST00000550446 DDX17Q92841 729 aaKnown RBP28.41■■■□□ 2.14
LETMD1-224ENST00000550446 ZNF772Q68DY9 489 aaPredicted RBP28.4■■■□□ 2.14
LETMD1-224ENST00000550446 ADGRL3Q9HAR2 1447 aa28.38■■■□□ 2.13
LETMD1-224ENST00000550446 LRRC59Q96AG4 307 aaKnown RBP28.38■■■□□ 2.13
LETMD1-224ENST00000550446 KIF1BO60333 1816 aa28.38■■■□□ 2.13
LETMD1-224ENST00000550446 ASXL1Q8IXJ9 1541 aa28.37■■■□□ 2.13
LETMD1-224ENST00000550446 RGL3Q3MIN7 710 aa28.34■■■□□ 2.13
LETMD1-224ENST00000550446 ROBO2Q9HCK4 1378 aa28.34■■■□□ 2.13
LETMD1-224ENST00000550446 SETD5Q9C0A6 1442 aa28.32■■■□□ 2.12
LETMD1-224ENST00000550446 MPHOSPH9Q99550 1183 aa28.31■■■□□ 2.12
LETMD1-224ENST00000550446 ORAI2Q96SN7 254 aa28.3■■■□□ 2.12
LETMD1-224ENST00000550446 SHPRHQ149N8 1683 aa28.29■■■□□ 2.12
LETMD1-224ENST00000550446 C1orf167Q5SNV9 1468 aa28.28■■■□□ 2.12
LETMD1-224ENST00000550446 RXRBP28702 533 aa28.28■■■□□ 2.12
LETMD1-224ENST00000550446 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
LETMD1-224ENST00000550446 ADGRF5Q8IZF2 1346 aa28.27■■■□□ 2.12
LETMD1-224ENST00000550446 AFF2P51816 1311 aa28.26■■■□□ 2.11
LETMD1-224ENST00000550446 C8orf37Q96NL8 207 aa28.25■■■□□ 2.11
LETMD1-224ENST00000550446 STK26Q9P289 416 aa28.25■■■□□ 2.11
LETMD1-224ENST00000550446 CCDC144AA2RUR9 1427 aa28.25■■■□□ 2.11
LETMD1-224ENST00000550446 NALCNQ8IZF0 1738 aa28.23■■■□□ 2.11
LETMD1-224ENST00000550446 PNPLA6Q8IY17 1366 aa28.23■■■□□ 2.11
LETMD1-224ENST00000550446 ADAMTS2O95450 1211 aa28.21■■■□□ 2.11
LETMD1-224ENST00000550446 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
LETMD1-224ENST00000550446 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
LETMD1-224ENST00000550446 ESCO1Q5FWF5 840 aa28.18■■■□□ 2.1
LETMD1-224ENST00000550446 TMEM132EQ6IEE7 984 aa28.18■■■□□ 2.1
LETMD1-224ENST00000550446 WAPLQ7Z5K2 1190 aa28.18■■■□□ 2.1
LETMD1-224ENST00000550446 NGLY1Q96IV0 654 aa28.18■■■□□ 2.1
LETMD1-224ENST00000550446 QTRT2Q9H974 415 aaKnown RBP28.18■■■□□ 2.1
LETMD1-224ENST00000550446 SOS2Q07890 1332 aaPredicted RBP28.18■■■□□ 2.1
LETMD1-224ENST00000550446 PPLO60437 1756 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms