RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
SCAF11-210ENST00000547654 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
SCAF11-210ENST00000547654 NUTM2FA1L443 756 aa10.28□□□□□ -0.76
SCAF11-210ENST00000547654 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
SCAF11-210ENST00000547654 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-210ENST00000547654 ZPR1O75312 459 aa10.27□□□□□ -0.77
SCAF11-210ENST00000547654 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
SCAF11-210ENST00000547654 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
SCAF11-210ENST00000547654 KMT5BQ4FZB7 885 aa10.23□□□□□ -0.77
SCAF11-210ENST00000547654 BLOC1S3Q6QNY0 202 aa10.23□□□□□ -0.77
SCAF11-210ENST00000547654 TMUB1Q9BVT8 246 aa10.23□□□□□ -0.77
SCAF11-210ENST00000547654 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
SCAF11-210ENST00000547654 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
SCAF11-210ENST00000547654 FCHSD2O94868 740 aa10.21□□□□□ -0.77
SCAF11-210ENST00000547654 CFHP08603 1231 aa10.21□□□□□ -0.77
SCAF11-210ENST00000547654 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
SCAF11-210ENST00000547654 TLL1O43897 1013 aa10.2□□□□□ -0.78
SCAF11-210ENST00000547654 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
SCAF11-210ENST00000547654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
SCAF11-210ENST00000547654 SEMA3EO15041 775 aa10.17□□□□□ -0.78
SCAF11-210ENST00000547654 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
SCAF11-210ENST00000547654 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
SCAF11-210ENST00000547654 OATP04181 439 aa10.14□□□□□ -0.79
SCAF11-210ENST00000547654 SLC19A1P41440 591 aa10.14□□□□□ -0.79
SCAF11-210ENST00000547654 NR1I2O75469 434 aa10.13□□□□□ -0.79
SCAF11-210ENST00000547654 S1PR4O95977 384 aa10.13□□□□□ -0.79
SCAF11-210ENST00000547654 HIC1Q14526 733 aa10.12□□□□□ -0.79
SCAF11-210ENST00000547654 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
SCAF11-210ENST00000547654 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
SCAF11-210ENST00000547654 ADH1BP00325 375 aa10.11□□□□□ -0.79
SCAF11-210ENST00000547654 SLC10A3P09131 477 aa10.11□□□□□ -0.79
SCAF11-210ENST00000547654 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
SCAF11-210ENST00000547654 PXYLP1Q8TE99 480 aa10.11□□□□□ -0.79
SCAF11-210ENST00000547654 SMYD5Q6GMV2 418 aa10.09□□□□□ -0.79
SCAF11-210ENST00000547654 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
SCAF11-210ENST00000547654 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-210ENST00000547654 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
SCAF11-210ENST00000547654 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
SCAF11-210ENST00000547654 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
SCAF11-210ENST00000547654 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
SCAF11-210ENST00000547654 LOC100996750A0A140TA64 210 aa10.06□□□□□ -0.8
SCAF11-210ENST00000547654 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-210ENST00000547654 POTECB2RU33 542 aa10.06□□□□□ -0.8
SCAF11-210ENST00000547654 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
SCAF11-210ENST00000547654 TRIM67Q6ZTA4 783 aa10.06□□□□□ -0.8
SCAF11-210ENST00000547654 ZNF598Q86UK7 904 aaKnown RBP10.06□□□□□ -0.8
SCAF11-210ENST00000547654 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-210ENST00000547654 KRTAP4-6Q9BYQ5 205 aa10.06□□□□□ -0.8
SCAF11-210ENST00000547654 RDH13Q8NBN7 331 aa10.05□□□□□ -0.8
SCAF11-210ENST00000547654 GNPATO15228 680 aa10.04□□□□□ -0.8
SCAF11-210ENST00000547654 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
SCAF11-210ENST00000547654 PRR20EP86478 221 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 PRR20CP86479 221 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 PRR20DP86480 221 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 PRR20BP86481 221 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 PRR20AP86496 221 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 LIAT1Q6ZQX7 453 aa10.03□□□□□ -0.8
SCAF11-210ENST00000547654 LCE2AQ5TA79 106 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-210ENST00000547654 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.81
SCAF11-210ENST00000547654 SPSB2Q99619 263 aa10.02□□□□□ -0.81
SCAF11-210ENST00000547654 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
SCAF11-210ENST00000547654 FAM187AA6NFU0 413 aa10□□□□□ -0.81
SCAF11-210ENST00000547654 DGAT1O75907 488 aa10□□□□□ -0.81
SCAF11-210ENST00000547654 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
SCAF11-210ENST00000547654 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
SCAF11-210ENST00000547654 FECHP22830 423 aa9.99□□□□□ -0.81
SCAF11-210ENST00000547654 TREML4Q6UXN2 200 aa9.99□□□□□ -0.81
SCAF11-210ENST00000547654 GPR37O15354 613 aa9.98□□□□□ -0.81
SCAF11-210ENST00000547654 PLA2G2CQ5R387 149 aa9.97□□□□□ -0.81
SCAF11-210ENST00000547654 SULF1Q8IWU6 871 aa9.97□□□□□ -0.81
SCAF11-210ENST00000547654 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
SCAF11-210ENST00000547654 MYT1Q01538 1121 aa9.96□□□□□ -0.82
SCAF11-210ENST00000547654 FUT2Q10981 343 aa9.96□□□□□ -0.82
SCAF11-210ENST00000547654 GDF9O60383 454 aa9.95□□□□□ -0.82
SCAF11-210ENST00000547654 MORN1Q5T089 497 aa9.95□□□□□ -0.82
SCAF11-210ENST00000547654 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
SCAF11-210ENST00000547654 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
SCAF11-210ENST00000547654 FOXC1Q12948 553 aa9.94□□□□□ -0.82
SCAF11-210ENST00000547654 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
SCAF11-210ENST00000547654 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-210ENST00000547654 FCF1Q9Y324 198 aaKnown RBP9.93□□□□□ -0.82
SCAF11-210ENST00000547654 GCGRP47871 477 aa9.92□□□□□ -0.82
SCAF11-210ENST00000547654 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
SCAF11-210ENST00000547654 SLC27A5Q9Y2P5 690 aa9.92□□□□□ -0.82
SCAF11-210ENST00000547654 RPIAP49247 311 aa9.91□□□□□ -0.82
SCAF11-210ENST00000547654 THAP11Q96EK4 314 aa9.9□□□□□ -0.82
SCAF11-210ENST00000547654 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
SCAF11-210ENST00000547654 PHOX2BQ99453 314 aa9.89□□□□□ -0.83
SCAF11-210ENST00000547654 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
SCAF11-210ENST00000547654 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
SCAF11-210ENST00000547654 CD2BP2O95400 341 aaKnown RBP9.88□□□□□ -0.83
SCAF11-210ENST00000547654 ST8SIA5O15466 376 aa9.87□□□□□ -0.83
SCAF11-210ENST00000547654 FAM160A2Q8N612 972 aaPredicted RBP9.87□□□□□ -0.83
SCAF11-210ENST00000547654 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
SCAF11-210ENST00000547654 SALL2Q9Y467 1007 aaPredicted RBP9.86□□□□□ -0.83
SCAF11-210ENST00000547654 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
SCAF11-210ENST00000547654 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
SCAF11-210ENST00000547654 BRICD5Q6PL45 260 aa9.85□□□□□ -0.83
SCAF11-210ENST00000547654 CYP4X1Q8N118 509 aa9.85□□□□□ -0.83
SCAF11-210ENST00000547654 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms