RNA–Protein interactions for RNA: ENST00000546129.1

CAPRIN2-215, Transcript of caprin family member 2, human

TSL 4

Gene CAPRIN2, Length 501 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN2-215	ENST00000546129	ROBO1	Q9Y6N7	1651 aa		32.4	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	CHD2	O14647	1828 aa	Known RBP	32.39	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	TMEM131L	A2VDJ0	1609 aa		32.37	■■■□□ 2.77
CAPRIN2-215	ENST00000546129	NKTR	P30414	1462 aa	Known RBP	32.37	■■■□□ 2.77
CAPRIN2-215	ENST00000546129	FAM135B	Q49AJ0	1406 aa		32.36	■■■□□ 2.77
CAPRIN2-215	ENST00000546129		E9PCH4	1651 aa		32.35	■■■□□ 2.77
CAPRIN2-215	ENST00000546129	PROSER2	Q86WR7	435 aa	Predicted RBP	32.34	■■■□□ 2.77
CAPRIN2-215	ENST00000546129	ZFYVE9	O95405	1425 aa		32.33	■■■□□ 2.77
CAPRIN2-215	ENST00000546129	BCAN	Q96GW7	911 aa		32.32	■■■□□ 2.76
CAPRIN2-215	ENST00000546129	RBM33	Q96EV2	1170 aa	Known RBP	32.3	■■■□□ 2.76
CAPRIN2-215	ENST00000546129	IQGAP3	Q86VI3	1631 aa		32.29	■■■□□ 2.76
CAPRIN2-215	ENST00000546129	RIMS2	Q9UQ26	1411 aa		32.27	■■■□□ 2.76
CAPRIN2-215	ENST00000546129	PLEKHG1	Q9ULL1	1385 aa		32.27	■■■□□ 2.76
CAPRIN2-215	ENST00000546129	PHLPP1	O60346	1717 aa		32.24	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	MSH6	P52701	1360 aa		32.23	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	PPP1R15A	O75807	674 aa	Predicted RBP	32.23	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	HDGF	P51858	240 aa	Known RBP	32.21	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	ROCK1	Q13464	1354 aa		32.2	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	RGS17	Q9UGC6	210 aa	Predicted RBP	32.2	■■■□□ 2.75
CAPRIN2-215	ENST00000546129	DIP2A	Q14689	1571 aa		32.16	■■■□□ 2.74
CAPRIN2-215	ENST00000546129	CHGA	P10645	457 aa	Known RBP	32.16	■■■□□ 2.74
CAPRIN2-215	ENST00000546129	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.13	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	SLAIN2	Q9P270	581 aa		32.12	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	TBX22	Q9Y458	520 aa		32.12	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	SPHKAP	Q2M3C7	1700 aa		32.12	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.12	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	ADAMTS13	Q76LX8	1427 aa		32.1	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.08	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	COL16A1	Q07092	1604 aa	Predicted RBP	32.08	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	NUP155	O75694	1391 aa		32.07	■■■□□ 2.73
CAPRIN2-215	ENST00000546129	NCOA3	Q9Y6Q9	1424 aa		32.07	■■■□□ 2.72
CAPRIN2-215	ENST00000546129	TRPM2	O94759	1503 aa		32.05	■■■□□ 2.72
CAPRIN2-215	ENST00000546129	ITGAE	P38570	1179 aa		32.05	■■■□□ 2.72
CAPRIN2-215	ENST00000546129	PIK3R4	Q99570	1358 aa		32.04	■■■□□ 2.72
CAPRIN2-215	ENST00000546129	C14orf37	Q86TY3	774 aa		32.02	■■■□□ 2.72
CAPRIN2-215	ENST00000546129	POTEA	Q6S8J7	498 aa		32.01	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	JCAD	Q9P266	1359 aa		32.01	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	NRXN3	Q9Y4C0	1643 aa		32	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.97	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	SETD1A	O15047	1707 aa	Known RBP	31.96	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	XRN1	Q8IZH2	1706 aa	Known RBP	31.96	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	SHPRH	Q149N8	1683 aa		31.95	■■■□□ 2.71
CAPRIN2-215	ENST00000546129	SETBP1	Q9Y6X0	1596 aa		31.94	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.94	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	C19orf44	Q9H6X5	657 aa		31.94	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	PTPRU	Q92729	1446 aa		31.93	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	CADPS2	Q86UW7	1296 aa		31.93	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	KIF1B	O60333	1816 aa		31.92	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	ATF3	P18847	181 aa		31.91	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	AMOTL2	Q9Y2J4	779 aa		31.91	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	CLTCL1	P53675	1640 aa		31.89	■■■□□ 2.7
CAPRIN2-215	ENST00000546129	LRP6	O75581	1613 aa		31.87	■■■□□ 2.69
CAPRIN2-215	ENST00000546129	SPATA31A6	Q5VVP1	1343 aa		31.84	■■■□□ 2.69
CAPRIN2-215	ENST00000546129	ZNF326	Q5BKZ1	582 aa	Known RBP	31.84	■■■□□ 2.69
CAPRIN2-215	ENST00000546129	DCC	P43146	1447 aa		31.83	■■■□□ 2.69
CAPRIN2-215	ENST00000546129	NEXMIF	Q5QGS0	1516 aa		31.83	■■■□□ 2.69
CAPRIN2-215	ENST00000546129	NHSL1	Q5SYE7	1610 aa		31.82	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	NALCN	Q8IZF0	1738 aa		31.8	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	ASXL1	Q8IXJ9	1541 aa		31.79	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	BRINP3	Q76B58	766 aa		31.78	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	MEX3C	Q5U5Q3	659 aa	Known RBP	31.77	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	MET	P08581	1390 aa		31.77	■■■□□ 2.68
CAPRIN2-215	ENST00000546129	RRBP1	Q9P2E9	1410 aa	Known RBP	31.75	■■■□□ 2.67
CAPRIN2-215	ENST00000546129	MST1R	Q04912	1400 aa		31.75	■■■□□ 2.67
CAPRIN2-215	ENST00000546129	NAIP	Q13075	1403 aa		31.74	■■■□□ 2.67
CAPRIN2-215	ENST00000546129	ADGRL3	Q9HAR2	1447 aa		31.7	■■■□□ 2.67
CAPRIN2-215	ENST00000546129	ZNF772	Q68DY9	489 aa	Predicted RBP	31.7	■■■□□ 2.67
CAPRIN2-215	ENST00000546129	SETD5	Q9C0A6	1442 aa		31.66	■■■□□ 2.66
CAPRIN2-215	ENST00000546129	PPL	O60437	1756 aa		31.66	■■■□□ 2.66
CAPRIN2-215	ENST00000546129	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.64	■■■□□ 2.66
CAPRIN2-215	ENST00000546129	NUTM2E	B1AL46	878 aa	Predicted RBP	31.64	■■■□□ 2.66
CAPRIN2-215	ENST00000546129	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.64	■■■□□ 2.66
CAPRIN2-215	ENST00000546129	TRIM52	Q96A61	297 aa		31.59	■■■□□ 2.65
CAPRIN2-215	ENST00000546129	LAMC1	P11047	1609 aa		31.58	■■■□□ 2.65
CAPRIN2-215	ENST00000546129	HFM1	A2PYH4	1435 aa		31.58	■■■□□ 2.65
CAPRIN2-215	ENST00000546129	PTCH1	Q13635	1447 aa		31.58	■■■□□ 2.65
CAPRIN2-215	ENST00000546129	LRRC59	Q96AG4	307 aa	Known RBP	31.57	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	VGF	O15240	615 aa	Predicted RBP	31.55	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	DDX17	Q92841	729 aa	Known RBP	31.55	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	C1orf167	Q5SNV9	1468 aa		31.53	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	RXRB	P28702	533 aa		31.53	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	AFF2	P51816	1311 aa		31.52	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	PNPLA6	Q8IY17	1366 aa		31.52	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	ROBO2	Q9HCK4	1378 aa		31.52	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.52	■■■□□ 2.64
CAPRIN2-215	ENST00000546129	PRAG1	Q86YV5	1406 aa		31.5	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.5	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	RPGRIP1L	Q68CZ1	1315 aa		31.49	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.48	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	IFT172	Q9UG01	1749 aa		31.46	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	C8orf37	Q96NL8	207 aa		31.45	■■■□□ 2.63
CAPRIN2-215	ENST00000546129	ORAI2	Q96SN7	254 aa		31.41	■■■□□ 2.62
CAPRIN2-215	ENST00000546129	CDC42BPG	Q6DT37	1551 aa		31.4	■■■□□ 2.62
CAPRIN2-215	ENST00000546129	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.39	■■■□□ 2.62
CAPRIN2-215	ENST00000546129	SOS2	Q07890	1332 aa	Predicted RBP	31.38	■■■□□ 2.61
CAPRIN2-215	ENST00000546129	RGS12	O14924	1447 aa		31.37	■■■□□ 2.61
CAPRIN2-215	ENST00000546129	MARF1	Q9Y4F3	1742 aa	Known RBP	31.36	■■■□□ 2.61
CAPRIN2-215	ENST00000546129	FOXD1	Q16676	465 aa		31.36	■■■□□ 2.61
CAPRIN2-215	ENST00000546129	QTRT2	Q9H974	415 aa	Known RBP	31.36	■■■□□ 2.61
CAPRIN2-215	ENST00000546129	KNDC1	Q76NI1	1749 aa		31.35	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms