RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
TSC1-208ENST00000545250 TSPYL1Q9H0U9 437 aa11.06□□□□□ -0.64
TSC1-208ENST00000545250 CCP110O43303 1012 aa11.06□□□□□ -0.64
TSC1-208ENST00000545250 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
TSC1-208ENST00000545250 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
TSC1-208ENST00000545250 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
TSC1-208ENST00000545250 KIAA0754O94854 1291 aa11.05□□□□□ -0.64
TSC1-208ENST00000545250 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
TSC1-208ENST00000545250 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
TSC1-208ENST00000545250 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
TSC1-208ENST00000545250 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
TSC1-208ENST00000545250 EIF3JO75822 258 aaKnown RBP11.04□□□□□ -0.64
TSC1-208ENST00000545250 CCDC175P0C221 793 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 LEKR1Q6ZMV7 388 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 DEF6Q9H4E7 631 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 MAGEC2Q9UBF1 373 aaPredicted RBP11.04□□□□□ -0.64
TSC1-208ENST00000545250 CDK5RAP3Q96JB5 506 aa11.04□□□□□ -0.64
TSC1-208ENST00000545250 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
TSC1-208ENST00000545250 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
TSC1-208ENST00000545250 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
TSC1-208ENST00000545250 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
TSC1-208ENST00000545250 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 CLIP1P30622 1438 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 ANKRD18BA2A2Z9 1011 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 TXLNAP40222 546 aa11.03□□□□□ -0.64
TSC1-208ENST00000545250 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.64
TSC1-208ENST00000545250 AMPHP49418 695 aa11.02□□□□□ -0.64
TSC1-208ENST00000545250 CEP63Q96MT8 703 aa11.02□□□□□ -0.64
TSC1-208ENST00000545250 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.64
TSC1-208ENST00000545250 WDHD1O75717 1129 aaPredicted RBP11.02□□□□□ -0.65
TSC1-208ENST00000545250 USP8P40818 1118 aa11.02□□□□□ -0.65
TSC1-208ENST00000545250 SAMD1Q6SPF0 538 aaPredicted RBP11.02□□□□□ -0.65
TSC1-208ENST00000545250 MLECQ14165 292 aa11.02□□□□□ -0.65
TSC1-208ENST00000545250 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
TSC1-208ENST00000545250 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
TSC1-208ENST00000545250 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
TSC1-208ENST00000545250 SLC3A2P08195 630 aaKnown RBP11.01□□□□□ -0.65
TSC1-208ENST00000545250 TERF2IPQ9NYB0 399 aa11.01□□□□□ -0.65
TSC1-208ENST00000545250 ZWINTO95229 277 aa11.01□□□□□ -0.65
TSC1-208ENST00000545250 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
TSC1-208ENST00000545250 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
TSC1-208ENST00000545250 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.656e-10■■■■□ 20.2
TSC1-208ENST00000545250 DHX8Q14562 1220 aaKnown RBP11.01□□□□□ -0.65
TSC1-208ENST00000545250 MAP3K9P80192 1104 aa11□□□□□ -0.65
TSC1-208ENST00000545250 FILIP1LQ4L180 1135 aa11□□□□□ -0.65
TSC1-208ENST00000545250 BICD2Q8TD16 824 aa11□□□□□ -0.65
TSC1-208ENST00000545250 PABPN1LA6NDY0 278 aaKnown RBP11□□□□□ -0.65
TSC1-208ENST00000545250 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
TSC1-208ENST00000545250 MTERF4Q7Z6M4 381 aaKnown RBP10.99□□□□□ -0.65
TSC1-208ENST00000545250 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
TSC1-208ENST00000545250 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
TSC1-208ENST00000545250 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
TSC1-208ENST00000545250 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
TSC1-208ENST00000545250 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
TSC1-208ENST00000545250 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.99□□□□□ -0.65
TSC1-208ENST00000545250 IQCEQ6IPM2 695 aa10.99□□□□□ -0.65
TSC1-208ENST00000545250 ANAPC15P60006 121 aa10.98□□□□□ -0.65
TSC1-208ENST00000545250 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
TSC1-208ENST00000545250 KRT18P05783 430 aaKnown RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 RALBP1Q15311 655 aa10.98□□□□□ -0.65
TSC1-208ENST00000545250 HMGB1P1B2RPK0 211 aaPredicted RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 GIGYF2Q6Y7W6 1299 aaKnown RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 GOLGA6L10A0A0M3HER8 536 aa10.98□□□□□ -0.65
TSC1-208ENST00000545250 DDX58O95786 925 aaKnown RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
TSC1-208ENST00000545250 DDX49Q9Y6V7 483 aaKnown RBP10.97□□□□□ -0.65
TSC1-208ENST00000545250 REC8O95072 547 aa10.97□□□□□ -0.65
TSC1-208ENST00000545250 RALYLQ86SE5 291 aaKnown RBP10.97□□□□□ -0.65
TSC1-208ENST00000545250 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
TSC1-208ENST00000545250 CETN2P41208 172 aa10.97□□□□□ -0.65
TSC1-208ENST00000545250 SF3B2Q13435 895 aaKnown RBP10.97□□□□□ -0.65
TSC1-208ENST00000545250 ROCK1Q13464 1354 aa10.96□□□□□ -0.65
TSC1-208ENST00000545250 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.65
TSC1-208ENST00000545250 MPHOSPH10O00566 681 aaKnown RBP10.96□□□□□ -0.65
TSC1-208ENST00000545250 HMGB2P26583 209 aaKnown RBP10.96□□□□□ -0.65
TSC1-208ENST00000545250 FAM161AQ3B820 660 aa10.96□□□□□ -0.65
TSC1-208ENST00000545250 GIMAP7Q8NHV1 300 aa10.96□□□□□ -0.65
TSC1-208ENST00000545250 STK26Q9P289 416 aa10.96□□□□□ -0.65
TSC1-208ENST00000545250 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.66
TSC1-208ENST00000545250 TAF3Q5VWG9 929 aa10.96□□□□□ -0.66
TSC1-208ENST00000545250 ANO2Q9NQ90 1003 aa10.96□□□□□ -0.66
TSC1-208ENST00000545250 SKIDA1Q1XH10 827 aa10.96□□□□□ -0.66
TSC1-208ENST00000545250 C9orf78Q9NZ63 289 aaPredicted RBP10.95□□□□□ -0.66
TSC1-208ENST00000545250 HMGB1P09429 215 aaKnown RBP10.95□□□□□ -0.66
TSC1-208ENST00000545250 STIM1Q13586 685 aa10.95□□□□□ -0.66
TSC1-208ENST00000545250 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
TSC1-208ENST00000545250 KIF7Q2M1P5 1343 aa10.95□□□□□ -0.66
TSC1-208ENST00000545250 PDILTQ8N807 584 aa10.95□□□□□ -0.66
TSC1-208ENST00000545250 ERC1Q8IUD2 1116 aa10.95□□□□□ -0.66
TSC1-208ENST00000545250 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
TSC1-208ENST00000545250 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
TSC1-208ENST00000545250 ERLIN1O75477 346 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 E9PSI1 815 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms