RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 SLC52A1Q9NWF4 448 aa17.53■□□□□ 0.4
C1RL-209ENST00000543941 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
C1RL-209ENST00000543941 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
C1RL-209ENST00000543941 KCNA6P17658 529 aa17.47■□□□□ 0.39
C1RL-209ENST00000543941 NUP155O75694 1391 aa17.47■□□□□ 0.39
C1RL-209ENST00000543941 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
C1RL-209ENST00000543941 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
C1RL-209ENST00000543941 MED1Q15648 1581 aaPredicted RBP17.46■□□□□ 0.39
C1RL-209ENST00000543941 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
C1RL-209ENST00000543941 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
C1RL-209ENST00000543941 CHD2O14647 1828 aaKnown RBP17.46■□□□□ 0.39
C1RL-209ENST00000543941 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
C1RL-209ENST00000543941 ADAMTS13Q76LX8 1427 aa17.43■□□□□ 0.38
C1RL-209ENST00000543941 SOCS7O14512 581 aa17.42■□□□□ 0.38
C1RL-209ENST00000543941 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
C1RL-209ENST00000543941 NAIPQ13075 1403 aa17.41■□□□□ 0.38
C1RL-209ENST00000543941 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
C1RL-209ENST00000543941 SPHKAPQ2M3C7 1700 aa17.4■□□□□ 0.38
C1RL-209ENST00000543941 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
C1RL-209ENST00000543941 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
C1RL-209ENST00000543941 NRXN3Q9Y4C0 1643 aa17.37■□□□□ 0.37
C1RL-209ENST00000543941 BCANQ96GW7 911 aa17.37■□□□□ 0.37
C1RL-209ENST00000543941 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
C1RL-209ENST00000543941 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
C1RL-209ENST00000543941 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
C1RL-209ENST00000543941 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
C1RL-209ENST00000543941 PPP1R15AO75807 674 aaPredicted RBP17.34■□□□□ 0.37
C1RL-209ENST00000543941 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.36
C1RL-209ENST00000543941 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
C1RL-209ENST00000543941 HDGFP51858 240 aaKnown RBP17.31■□□□□ 0.36
C1RL-209ENST00000543941 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.3■□□□□ 0.36
C1RL-209ENST00000543941 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
C1RL-209ENST00000543941 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
C1RL-209ENST00000543941 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
C1RL-209ENST00000543941 TRPM2O94759 1503 aa17.28■□□□□ 0.36
C1RL-209ENST00000543941 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
C1RL-209ENST00000543941 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
C1RL-209ENST00000543941 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
C1RL-209ENST00000543941 METP08581 1390 aa17.28■□□□□ 0.36
C1RL-209ENST00000543941 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
C1RL-209ENST00000543941 MSH6P52701 1360 aa17.27■□□□□ 0.35
C1RL-209ENST00000543941 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
C1RL-209ENST00000543941 KIF1BO60333 1816 aa17.25■□□□□ 0.35
C1RL-209ENST00000543941 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
C1RL-209ENST00000543941 FOXD1Q16676 465 aa17.24■□□□□ 0.35
C1RL-209ENST00000543941 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
C1RL-209ENST00000543941 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
C1RL-209ENST00000543941 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
C1RL-209ENST00000543941 SETD1AO15047 1707 aaKnown RBP17.23■□□□□ 0.35
C1RL-209ENST00000543941 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
C1RL-209ENST00000543941 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
C1RL-209ENST00000543941 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
C1RL-209ENST00000543941 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
C1RL-209ENST00000543941 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
C1RL-209ENST00000543941 PPLO60437 1756 aa17.17■□□□□ 0.34
C1RL-209ENST00000543941 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
C1RL-209ENST00000543941 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
C1RL-209ENST00000543941 MST1RQ04912 1400 aa17.15■□□□□ 0.34
C1RL-209ENST00000543941 LRP6O75581 1613 aa17.15■□□□□ 0.34
C1RL-209ENST00000543941 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
C1RL-209ENST00000543941 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
C1RL-209ENST00000543941 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
C1RL-209ENST00000543941 ATF3P18847 181 aa17.13■□□□□ 0.33
C1RL-209ENST00000543941 JCADQ9P266 1359 aa17.13■□□□□ 0.33
C1RL-209ENST00000543941 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
C1RL-209ENST00000543941 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
C1RL-209ENST00000543941 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
C1RL-209ENST00000543941 DCCP43146 1447 aa17.11■□□□□ 0.33
C1RL-209ENST00000543941 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
C1RL-209ENST00000543941 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
C1RL-209ENST00000543941 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
C1RL-209ENST00000543941 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
C1RL-209ENST00000543941 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
C1RL-209ENST00000543941 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
C1RL-209ENST00000543941 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
C1RL-209ENST00000543941 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
C1RL-209ENST00000543941 SHPRHQ149N8 1683 aa17.09■□□□□ 0.33
C1RL-209ENST00000543941 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
C1RL-209ENST00000543941 RGL3Q3MIN7 710 aa17.06■□□□□ 0.32
C1RL-209ENST00000543941 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
C1RL-209ENST00000543941 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
C1RL-209ENST00000543941 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
C1RL-209ENST00000543941 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
C1RL-209ENST00000543941 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
C1RL-209ENST00000543941 SPATA31A6Q5VVP1 1343 aa17.02■□□□□ 0.32
C1RL-209ENST00000543941 LAMC1P11047 1609 aa17.01■□□□□ 0.31
C1RL-209ENST00000543941 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
C1RL-209ENST00000543941 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
C1RL-209ENST00000543941 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
C1RL-209ENST00000543941 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
C1RL-209ENST00000543941 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
C1RL-209ENST00000543941 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
C1RL-209ENST00000543941 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
C1RL-209ENST00000543941 PIK3C2GO75747 1445 aa16.98■□□□□ 0.31
C1RL-209ENST00000543941 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
C1RL-209ENST00000543941 STK26Q9P289 416 aa16.97■□□□□ 0.31
C1RL-209ENST00000543941 TECPR2O15040 1411 aa16.96■□□□□ 0.31
C1RL-209ENST00000543941 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
C1RL-209ENST00000543941 NRXN1Q9ULB1 1477 aa16.95■□□□□ 0.3
C1RL-209ENST00000543941 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms