RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
MRPS35-204ENST00000542199 VPS9D1Q9Y2B5 631 aa15.95■□□□□ 0.14
MRPS35-204ENST00000542199 TMEM134Q9H6X4 195 aa15.93■□□□□ 0.14
MRPS35-204ENST00000542199 DAXXQ9UER7 740 aaPredicted RBP15.92■□□□□ 0.14
MRPS35-204ENST00000542199 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
MRPS35-204ENST00000542199 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
MRPS35-204ENST00000542199 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.13
MRPS35-204ENST00000542199 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
MRPS35-204ENST00000542199 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
MRPS35-204ENST00000542199 BHMG1C9JSJ3 638 aaPredicted RBP15.83■□□□□ 0.12
MRPS35-204ENST00000542199 SWT1Q5T5J6 900 aaKnown RBP15.83■□□□□ 0.12
MRPS35-204ENST00000542199 ADGRD1Q6QNK2 874 aa15.83■□□□□ 0.12
MRPS35-204ENST00000542199 TK2O00142 265 aa15.82■□□□□ 0.12
MRPS35-204ENST00000542199 CD46P15529 392 aa15.82■□□□□ 0.12
MRPS35-204ENST00000542199 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
MRPS35-204ENST00000542199 NBPF3Q9H094 633 aa15.8■□□□□ 0.12
MRPS35-204ENST00000542199 SULF1Q8IWU6 871 aa15.79■□□□□ 0.12
MRPS35-204ENST00000542199 SH3D19Q5HYK7 790 aa15.78■□□□□ 0.12
MRPS35-204ENST00000542199 ANKRD13DQ6ZTN6 518 aa15.77■□□□□ 0.12
MRPS35-204ENST00000542199 SAMD7Q7Z3H4 446 aa15.77■□□□□ 0.12
MRPS35-204ENST00000542199 RDH13Q8NBN7 331 aa15.76■□□□□ 0.11
MRPS35-204ENST00000542199 TBC1D2Q9BYX2 928 aa15.76■□□□□ 0.11
MRPS35-204ENST00000542199 HRO43593 1189 aa15.75■□□□□ 0.11
MRPS35-204ENST00000542199 LAPTM4BQ86VI4 370 aa15.75■□□□□ 0.11
MRPS35-204ENST00000542199 GOPCQ9HD26 462 aa15.75■□□□□ 0.11
MRPS35-204ENST00000542199 SLC10A3P09131 477 aa15.74■□□□□ 0.11
MRPS35-204ENST00000542199 MYSM1Q5VVJ2 828 aa15.74■□□□□ 0.11
MRPS35-204ENST00000542199 MRPL50Q8N5N7 158 aaKnown RBP15.74■□□□□ 0.11
MRPS35-204ENST00000542199 ZFRQ96KR1 1074 aaKnown RBP15.73■□□□□ 0.11
MRPS35-204ENST00000542199 KRTAP3-3Q9BYR6 98 aa15.73■□□□□ 0.11
MRPS35-204ENST00000542199 KRTAP3-2Q9BYR7 98 aa15.73■□□□□ 0.11
MRPS35-204ENST00000542199 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
MRPS35-204ENST00000542199 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
MRPS35-204ENST00000542199 SPIRE2Q8WWL2 714 aa15.72■□□□□ 0.11
MRPS35-204ENST00000542199 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
MRPS35-204ENST00000542199 PCMTD1Q96MG8 357 aaPredicted RBP15.7■□□□□ 0.1
MRPS35-204ENST00000542199 RNF40O75150 1001 aa15.69■□□□□ 0.1
MRPS35-204ENST00000542199 SKIV2LQ15477 1246 aaKnown RBP15.69■□□□□ 0.1
MRPS35-204ENST00000542199 PROCA1Q8NCQ7 364 aaPredicted RBP15.69■□□□□ 0.1
MRPS35-204ENST00000542199 HDGFP51858 240 aaKnown RBP15.67■□□□□ 0.1
MRPS35-204ENST00000542199 CLK2P49760 499 aaKnown RBP15.66■□□□□ 0.1
MRPS35-204ENST00000542199 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
MRPS35-204ENST00000542199 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
MRPS35-204ENST00000542199 GCGRP47871 477 aa15.65■□□□□ 0.1
MRPS35-204ENST00000542199 SLF2Q8IX21 1173 aa15.65■□□□□ 0.1
MRPS35-204ENST00000542199 LIMD1Q9UGP4 676 aa15.65■□□□□ 0.1
MRPS35-204ENST00000542199 CC2D2AQ9P2K1 1620 aa15.64■□□□□ 0.09
MRPS35-204ENST00000542199 MOXD2PA6NHM9 499 aa15.63■□□□□ 0.09
MRPS35-204ENST00000542199 KDM4AO75164 1064 aa15.62■□□□□ 0.09
MRPS35-204ENST00000542199 NDUFV2P19404 249 aa15.62■□□□□ 0.09
MRPS35-204ENST00000542199 DIXDC1Q155Q3 683 aa15.62■□□□□ 0.09
MRPS35-204ENST00000542199 POTEGQ6S5H5 508 aa15.62■□□□□ 0.09
MRPS35-204ENST00000542199 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
MRPS35-204ENST00000542199 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
MRPS35-204ENST00000542199 CFHP08603 1231 aa15.61■□□□□ 0.09
MRPS35-204ENST00000542199 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
MRPS35-204ENST00000542199 RIC3Q7Z5B4 369 aa15.61■□□□□ 0.09
MRPS35-204ENST00000542199 LRCH3Q96II8 777 aa15.61■□□□□ 0.09
MRPS35-204ENST00000542199 SLC4A3P48751 1232 aa15.6■□□□□ 0.09
MRPS35-204ENST00000542199 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
MRPS35-204ENST00000542199 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.6■□□□□ 0.09
MRPS35-204ENST00000542199 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.6■□□□□ 0.09
MRPS35-204ENST00000542199 FBXO31Q5XUX0 539 aaPredicted RBP15.59■□□□□ 0.09
MRPS35-204ENST00000542199 RSBN1LQ6PCB5 846 aaPredicted RBP15.59■□□□□ 0.09
MRPS35-204ENST00000542199 HLA-CQ95604 372 aa15.59■□□□□ 0.09
MRPS35-204ENST00000542199 POTEMA6NI47 508 aa15.58■□□□□ 0.08
MRPS35-204ENST00000542199 GOLGA8CPA6NN73 597 aa15.58■□□□□ 0.08
MRPS35-204ENST00000542199 BCAMP50895 628 aa15.58■□□□□ 0.08
MRPS35-204ENST00000542199 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
MRPS35-204ENST00000542199 SPTLC1O15269 473 aa15.57■□□□□ 0.08
MRPS35-204ENST00000542199 HOXA2O43364 376 aa15.57■□□□□ 0.08
MRPS35-204ENST00000542199 ANKK1Q8NFD2 765 aa15.57■□□□□ 0.08
MRPS35-204ENST00000542199 GUCA2AQ02747 115 aa15.55■□□□□ 0.08
MRPS35-204ENST00000542199 CSPP1Q1MSJ5 1256 aa15.55■□□□□ 0.08
MRPS35-204ENST00000542199 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
MRPS35-204ENST00000542199 FUT2Q10981 343 aa15.54■□□□□ 0.08
MRPS35-204ENST00000542199 WNT2BQ93097 391 aa15.54■□□□□ 0.08
MRPS35-204ENST00000542199 PCDHB15Q9Y5E8 787 aa15.54■□□□□ 0.08
MRPS35-204ENST00000542199 SOWAHBA6NEL2 793 aa15.53■□□□□ 0.08
MRPS35-204ENST00000542199 USP46P62068 366 aa15.53■□□□□ 0.08
MRPS35-204ENST00000542199 HPS5Q9UPZ3 1129 aa15.52■□□□□ 0.08
MRPS35-204ENST00000542199 QPCTQ16769 361 aa15.51■□□□□ 0.07
MRPS35-204ENST00000542199 PCDHGC3Q9UN70 934 aa15.49■□□□□ 0.07
MRPS35-204ENST00000542199 FDX1P10109 184 aa15.48■□□□□ 0.07
MRPS35-204ENST00000542199 TUSC1Q2TAM9 212 aa15.48■□□□□ 0.07
MRPS35-204ENST00000542199 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
MRPS35-204ENST00000542199 GJA5P36382 358 aa15.47■□□□□ 0.07
MRPS35-204ENST00000542199 KMT5BQ4FZB7 885 aa15.47■□□□□ 0.07
MRPS35-204ENST00000542199 RFC5P40937 340 aa15.46■□□□□ 0.07
MRPS35-204ENST00000542199 PPP4CP60510 307 aa15.46■□□□□ 0.07
MRPS35-204ENST00000542199 APLP1P51693 650 aa15.45■□□□□ 0.06
MRPS35-204ENST00000542199 PUS10Q3MIT2 529 aaKnown RBP15.45■□□□□ 0.06
MRPS35-204ENST00000542199 TSR3Q9UJK0 312 aaKnown RBP15.45■□□□□ 0.06
MRPS35-204ENST00000542199 LILRB3O75022 631 aa15.44■□□□□ 0.06
MRPS35-204ENST00000542199 KCTD12Q96CX2 325 aaKnown RBP15.44■□□□□ 0.06
MRPS35-204ENST00000542199 ACTN4O43707 911 aaKnown RBP15.43■□□□□ 0.06
MRPS35-204ENST00000542199 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
MRPS35-204ENST00000542199 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
MRPS35-204ENST00000542199 PPP2R2DQ66LE6 453 aa15.43■□□□□ 0.06
MRPS35-204ENST00000542199 WBP1LQ9NX94 342 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms