RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 ZFYVE9O95405 1425 aa25.52■■□□□ 1.68
PSMD3-204ENST00000540504 SLC26A8Q96RN1 970 aa25.51■■□□□ 1.67
PSMD3-204ENST00000540504 NUP155O75694 1391 aa25.51■■□□□ 1.67
PSMD3-204ENST00000540504 PLEKHG1Q9ULL1 1385 aa25.49■■□□□ 1.67
PSMD3-204ENST00000540504 RIMS2Q9UQ26 1411 aa25.48■■□□□ 1.67
PSMD3-204ENST00000540504 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.47■■□□□ 1.67
PSMD3-204ENST00000540504 BCANQ96GW7 911 aa25.47■■□□□ 1.67
PSMD3-204ENST00000540504 NWD1Q149M9 1564 aa25.47■■□□□ 1.67
PSMD3-204ENST00000540504 SOCS7O14512 581 aa25.46■■□□□ 1.67
PSMD3-204ENST00000540504 NKTRP30414 1462 aaKnown RBP25.46■■□□□ 1.67
PSMD3-204ENST00000540504 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
PSMD3-204ENST00000540504 TMEM94Q12767 1356 aa25.45■■□□□ 1.67
PSMD3-204ENST00000540504 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
PSMD3-204ENST00000540504 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
PSMD3-204ENST00000540504 CHGAP10645 457 aaKnown RBP25.43■■□□□ 1.66
PSMD3-204ENST00000540504 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
PSMD3-204ENST00000540504 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
PSMD3-204ENST00000540504 TBX22Q9Y458 520 aa25.4■■□□□ 1.66
PSMD3-204ENST00000540504 FAM135BQ49AJ0 1406 aa25.39■■□□□ 1.66
PSMD3-204ENST00000540504 DIP2AQ14689 1571 aa25.36■■□□□ 1.65
PSMD3-204ENST00000540504 SPHKAPQ2M3C7 1700 aa25.36■■□□□ 1.65
PSMD3-204ENST00000540504 MSH6P52701 1360 aa25.33■■□□□ 1.65
PSMD3-204ENST00000540504 PIK3R4Q99570 1358 aa25.33■■□□□ 1.65
PSMD3-204ENST00000540504 NAIPQ13075 1403 aa25.33■■□□□ 1.65
PSMD3-204ENST00000540504 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
PSMD3-204ENST00000540504 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
PSMD3-204ENST00000540504 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
PSMD3-204ENST00000540504 RBM33Q96EV2 1170 aaKnown RBP25.31■■□□□ 1.64
PSMD3-204ENST00000540504 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
PSMD3-204ENST00000540504 PHF23Q9BUL5 403 aaPredicted RBP25.28■■□□□ 1.64
PSMD3-204ENST00000540504 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
PSMD3-204ENST00000540504 TRPM2O94759 1503 aa25.27■■□□□ 1.64
PSMD3-204ENST00000540504 HFM1A2PYH4 1435 aa25.26■■□□□ 1.63
PSMD3-204ENST00000540504 SLAIN2Q9P270 581 aa25.24■■□□□ 1.63
PSMD3-204ENST00000540504 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
PSMD3-204ENST00000540504 SETBP1Q9Y6X0 1596 aa25.22■■□□□ 1.63
PSMD3-204ENST00000540504 CLTCL1P53675 1640 aa25.21■■□□□ 1.63
PSMD3-204ENST00000540504 KIF1BO60333 1816 aa25.19■■□□□ 1.62
PSMD3-204ENST00000540504 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
PSMD3-204ENST00000540504 AMOTL2Q9Y2J4 779 aa25.19■■□□□ 1.62
PSMD3-204ENST00000540504 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
PSMD3-204ENST00000540504 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
PSMD3-204ENST00000540504 C19orf44Q9H6X5 657 aa25.18■■□□□ 1.62
PSMD3-204ENST00000540504 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
PSMD3-204ENST00000540504 PTPRUQ92729 1446 aa25.17■■□□□ 1.62
PSMD3-204ENST00000540504 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.16■■□□□ 1.62
PSMD3-204ENST00000540504 NEXMIFQ5QGS0 1516 aa25.16■■□□□ 1.62
PSMD3-204ENST00000540504 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
PSMD3-204ENST00000540504 XRN1Q8IZH2 1706 aaKnown RBP25.14■■□□□ 1.61
PSMD3-204ENST00000540504 ATF3P18847 181 aa25.13■■□□□ 1.61
PSMD3-204ENST00000540504 SLC4A1APQ9BWU0 796 aaKnown RBP25.13■■□□□ 1.61
PSMD3-204ENST00000540504 DCCP43146 1447 aa25.11■■□□□ 1.61
PSMD3-204ENST00000540504 METP08581 1390 aa25.08■■□□□ 1.61
PSMD3-204ENST00000540504 JCADQ9P266 1359 aa25.08■■□□□ 1.61
PSMD3-204ENST00000540504 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
PSMD3-204ENST00000540504 RPGRIP1LQ68CZ1 1315 aa25.07■■□□□ 1.6
PSMD3-204ENST00000540504 COL16A1Q07092 1604 aaPredicted RBP25.06■■□□□ 1.6
PSMD3-204ENST00000540504 RGS17Q9UGC6 210 aaPredicted RBP25.06■■□□□ 1.6
PSMD3-204ENST00000540504 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
PSMD3-204ENST00000540504 ACIN1Q9UKV3 1341 aaKnown RBP25.01■■□□□ 1.59
PSMD3-204ENST00000540504 PPLO60437 1756 aa24.99■■□□□ 1.59
PSMD3-204ENST00000540504 BRINP3Q76B58 766 aa24.99■■□□□ 1.59
PSMD3-204ENST00000540504 ADGRL3Q9HAR2 1447 aa24.99■■□□□ 1.59
PSMD3-204ENST00000540504 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
PSMD3-204ENST00000540504 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
PSMD3-204ENST00000540504 MST1RQ04912 1400 aa24.97■■□□□ 1.59
PSMD3-204ENST00000540504 PTCH1Q13635 1447 aa24.96■■□□□ 1.59
PSMD3-204ENST00000540504 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.59
PSMD3-204ENST00000540504 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.59
PSMD3-204ENST00000540504 SHPRHQ149N8 1683 aa24.95■■□□□ 1.58
PSMD3-204ENST00000540504 MPHOSPH9Q99550 1183 aa24.95■■□□□ 1.58
PSMD3-204ENST00000540504 FOXD1Q16676 465 aa24.94■■□□□ 1.58
PSMD3-204ENST00000540504 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
PSMD3-204ENST00000540504 NALCNQ8IZF0 1738 aa24.94■■□□□ 1.58
PSMD3-204ENST00000540504 POTEAQ6S8J7 498 aa24.92■■□□□ 1.58
PSMD3-204ENST00000540504 NHSL1Q5SYE7 1610 aa24.9■■□□□ 1.58
PSMD3-204ENST00000540504 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
PSMD3-204ENST00000540504 SETD5Q9C0A6 1442 aa24.88■■□□□ 1.57
PSMD3-204ENST00000540504 ROBO2Q9HCK4 1378 aa24.88■■□□□ 1.57
PSMD3-204ENST00000540504 LRP6O75581 1613 aa24.87■■□□□ 1.57
PSMD3-204ENST00000540504 ANKRD30BQ9BXX2 1392 aa24.87■■□□□ 1.57
PSMD3-204ENST00000540504 MEX3CQ5U5Q3 659 aaKnown RBP24.85■■□□□ 1.57
PSMD3-204ENST00000540504 LRRC59Q96AG4 307 aaKnown RBP24.85■■□□□ 1.57
PSMD3-204ENST00000540504 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
PSMD3-204ENST00000540504 C1orf167Q5SNV9 1468 aa24.84■■□□□ 1.57
PSMD3-204ENST00000540504 RGL3Q3MIN7 710 aa24.84■■□□□ 1.57
PSMD3-204ENST00000540504 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
PSMD3-204ENST00000540504 ZNF772Q68DY9 489 aaPredicted RBP24.81■■□□□ 1.56
PSMD3-204ENST00000540504 LAMC1P11047 1609 aa24.8■■□□□ 1.56
PSMD3-204ENST00000540504 TECPR2O15040 1411 aa24.78■■□□□ 1.56
PSMD3-204ENST00000540504 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
PSMD3-204ENST00000540504 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
PSMD3-204ENST00000540504 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
PSMD3-204ENST00000540504 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
PSMD3-204ENST00000540504 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
PSMD3-204ENST00000540504 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
PSMD3-204ENST00000540504 DDX17Q92841 729 aaKnown RBP24.75■■□□□ 1.55
PSMD3-204ENST00000540504 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
PSMD3-204ENST00000540504 ORAI2Q96SN7 254 aa24.74■■□□□ 1.55
PSMD3-204ENST00000540504 ABCC11Q96J66 1382 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms