RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SMAPO00193 183 aa10.91□□□□□ -0.66
MRE11-209ENST00000540013 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
MRE11-209ENST00000540013 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
MRE11-209ENST00000540013 TMEM134Q9H6X4 195 aa10.9□□□□□ -0.66
MRE11-209ENST00000540013 PDE4DQ08499 809 aa10.89□□□□□ -0.67
MRE11-209ENST00000540013 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
MRE11-209ENST00000540013 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
MRE11-209ENST00000540013 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
MRE11-209ENST00000540013 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
MRE11-209ENST00000540013 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
MRE11-209ENST00000540013 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
MRE11-209ENST00000540013 SULF1Q8IWU6 871 aa10.87□□□□□ -0.67
MRE11-209ENST00000540013 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
MRE11-209ENST00000540013 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
MRE11-209ENST00000540013 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
MRE11-209ENST00000540013 LRCH3Q96II8 777 aa10.86□□□□□ -0.67
MRE11-209ENST00000540013 PHOX2BQ99453 314 aa10.86□□□□□ -0.67
MRE11-209ENST00000540013 WNT2BQ93097 391 aa10.84□□□□□ -0.67
MRE11-209ENST00000540013 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
MRE11-209ENST00000540013 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
MRE11-209ENST00000540013 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
MRE11-209ENST00000540013 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
MRE11-209ENST00000540013 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
MRE11-209ENST00000540013 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
MRE11-209ENST00000540013 GIGYF2Q6Y7W6 1299 aaKnown RBP10.81□□□□□ -0.68
MRE11-209ENST00000540013 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
MRE11-209ENST00000540013 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
MRE11-209ENST00000540013 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
MRE11-209ENST00000540013 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
MRE11-209ENST00000540013 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
MRE11-209ENST00000540013 RNF40O75150 1001 aa10.78□□□□□ -0.68
MRE11-209ENST00000540013 KDM4CQ9H3R0 1056 aa10.78□□□□□ -0.68
MRE11-209ENST00000540013 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
MRE11-209ENST00000540013 SSTR3P32745 418 aaPredicted RBP10.77□□□□□ -0.69
MRE11-209ENST00000540013 C14orf37Q86TY3 774 aa10.77□□□□□ -0.69
MRE11-209ENST00000540013 KCTD12Q96CX2 325 aaKnown RBP10.77□□□□□ -0.69
MRE11-209ENST00000540013 PRR14Q9BWN1 585 aa10.77□□□□□ -0.69
MRE11-209ENST00000540013 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
MRE11-209ENST00000540013 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
MRE11-209ENST00000540013 RDH13Q8NBN7 331 aa10.76□□□□□ -0.69
MRE11-209ENST00000540013 TSR3Q9UJK0 312 aaKnown RBP10.76□□□□□ -0.69
MRE11-209ENST00000540013 PPP4CP60510 307 aa10.75□□□□□ -0.69
MRE11-209ENST00000540013 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
MRE11-209ENST00000540013 REPIN1Q9BWE0 567 aaKnown RBP10.75□□□□□ -0.69
MRE11-209ENST00000540013 GPBP1L1Q9HC44 474 aaPredicted RBP10.74□□□□□ -0.69
MRE11-209ENST00000540013 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
MRE11-209ENST00000540013 CD46P15529 392 aa10.73□□□□□ -0.69
MRE11-209ENST00000540013 BCAMP50895 628 aa10.73□□□□□ -0.69
MRE11-209ENST00000540013 DIXDC1Q155Q3 683 aa10.73□□□□□ -0.69
MRE11-209ENST00000540013 KMT5BQ4FZB7 885 aa10.73□□□□□ -0.69
MRE11-209ENST00000540013 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
MRE11-209ENST00000540013 MS4A1P11836 297 aa10.7□□□□□ -0.7
MRE11-209ENST00000540013 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
MRE11-209ENST00000540013 CFHP08603 1231 aa10.69□□□□□ -0.7
MRE11-209ENST00000540013 SLC10A3P09131 477 aa10.69□□□□□ -0.7
MRE11-209ENST00000540013 GCGRP47871 477 aa10.68□□□□□ -0.7
MRE11-209ENST00000540013 USP46P62068 366 aa10.68□□□□□ -0.7
MRE11-209ENST00000540013 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
MRE11-209ENST00000540013 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
MRE11-209ENST00000540013 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
MRE11-209ENST00000540013 WBP1LQ9NX94 342 aa10.66□□□□□ -0.7
MRE11-209ENST00000540013 KDM4AO75164 1064 aa10.65□□□□□ -0.7
MRE11-209ENST00000540013 PTPN5P54829 565 aa10.65□□□□□ -0.7
MRE11-209ENST00000540013 ACTN4O43707 911 aaKnown RBP10.64□□□□□ -0.71
MRE11-209ENST00000540013 FAM117AQ9C073 453 aa10.64□□□□□ -0.71
MRE11-209ENST00000540013 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
MRE11-209ENST00000540013 RGS20O76081 388 aa10.62□□□□□ -0.71
MRE11-209ENST00000540013 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
MRE11-209ENST00000540013 APLP1P51693 650 aa10.6□□□□□ -0.71
MRE11-209ENST00000540013 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
MRE11-209ENST00000540013 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
MRE11-209ENST00000540013 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
MRE11-209ENST00000540013 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
MRE11-209ENST00000540013 GJA5P36382 358 aa10.59□□□□□ -0.71
MRE11-209ENST00000540013 FUT2Q10981 343 aa10.59□□□□□ -0.71
MRE11-209ENST00000540013 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
MRE11-209ENST00000540013 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
MRE11-209ENST00000540013 HOXA2O43364 376 aa10.57□□□□□ -0.72
MRE11-209ENST00000540013 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
MRE11-209ENST00000540013 NR1I2O75469 434 aa10.56□□□□□ -0.72
MRE11-209ENST00000540013 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
MRE11-209ENST00000540013 Q3C1V9 767 aa10.54□□□□□ -0.72
MRE11-209ENST00000540013 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
MRE11-209ENST00000540013 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
MRE11-209ENST00000540013 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
MRE11-209ENST00000540013 SPTLC1O15269 473 aa10.52□□□□□ -0.73
MRE11-209ENST00000540013 FDX1P10109 184 aa10.52□□□□□ -0.73
MRE11-209ENST00000540013 MORN1Q5T089 497 aa10.52□□□□□ -0.73
MRE11-209ENST00000540013 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
MRE11-209ENST00000540013 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
MRE11-209ENST00000540013 PCMTD1Q96MG8 357 aaPredicted RBP10.52□□□□□ -0.73
MRE11-209ENST00000540013 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
MRE11-209ENST00000540013 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
MRE11-209ENST00000540013 SALL2Q9Y467 1007 aaPredicted RBP10.51□□□□□ -0.73
MRE11-209ENST00000540013 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
MRE11-209ENST00000540013 MTRQ99707 1265 aa10.5□□□□□ -0.73
MRE11-209ENST00000540013 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
MRE11-209ENST00000540013 PUS10Q3MIT2 529 aaKnown RBP10.49□□□□□ -0.73
MRE11-209ENST00000540013 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
MRE11-209ENST00000540013 COPS2P61201 443 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms