RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
CCND1-204ENST00000539241 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
CCND1-204ENST00000539241 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
CCND1-204ENST00000539241 PROSER2Q86WR7 435 aaPredicted RBP21.38■■□□□ 1.01
CCND1-204ENST00000539241 NUP155O75694 1391 aa21.37■■□□□ 1.01
CCND1-204ENST00000539241 PLEKHG1Q9ULL1 1385 aa21.37■■□□□ 1.01
CCND1-204ENST00000539241 CHGAP10645 457 aaKnown RBP21.37■■□□□ 1.01
CCND1-204ENST00000539241 GCC2Q8IWJ2 1684 aa21.36■■□□□ 1.01
CCND1-204ENST00000539241 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
CCND1-204ENST00000539241 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
CCND1-204ENST00000539241 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.34■■□□□ 1.01
CCND1-204ENST00000539241 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
CCND1-204ENST00000539241 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1.01
CCND1-204ENST00000539241 IQGAP3Q86VI3 1631 aa21.33■■□□□ 1.01
CCND1-204ENST00000539241 FAM135BQ49AJ0 1406 aa21.33■■□□□ 1.01
CCND1-204ENST00000539241 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
CCND1-204ENST00000539241 NWD1Q149M9 1564 aa21.32■■□□□ 1
CCND1-204ENST00000539241 E9PCH4 1651 aa21.32■■□□□ 1
CCND1-204ENST00000539241 TBX22Q9Y458 520 aa21.3■■□□□ 1
CCND1-204ENST00000539241 NUTM2DQ5VT03 806 aaPredicted RBP21.29■■□□□ 1
CCND1-204ENST00000539241 MSH6P52701 1360 aa21.28■■□□□ 1
CCND1-204ENST00000539241 MYO5BQ9ULV0 1848 aa21.27■■□□□ 1
CCND1-204ENST00000539241 ADAMTS13Q76LX8 1427 aa21.25■□□□□ 0.99
CCND1-204ENST00000539241 RRBP1Q9P2E9 1410 aaKnown RBP21.24■□□□□ 0.99
CCND1-204ENST00000539241 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
CCND1-204ENST00000539241 SLAIN2Q9P270 581 aa21.21■□□□□ 0.99
CCND1-204ENST00000539241 NCOA3Q9Y6Q9 1424 aa21.21■□□□□ 0.99
CCND1-204ENST00000539241 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
CCND1-204ENST00000539241 ROBO1Q9Y6N7 1651 aa21.2■□□□□ 0.98
CCND1-204ENST00000539241 CHD2O14647 1828 aaKnown RBP21.2■□□□□ 0.98
CCND1-204ENST00000539241 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
CCND1-204ENST00000539241 NAIPQ13075 1403 aa21.18■□□□□ 0.98
CCND1-204ENST00000539241 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
CCND1-204ENST00000539241 RGS17Q9UGC6 210 aaPredicted RBP21.15■□□□□ 0.98
CCND1-204ENST00000539241 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
CCND1-204ENST00000539241 TRPM2O94759 1503 aa21.14■□□□□ 0.98
CCND1-204ENST00000539241 PTPRUQ92729 1446 aa21.14■□□□□ 0.98
CCND1-204ENST00000539241 SPHKAPQ2M3C7 1700 aa21.13■□□□□ 0.97
CCND1-204ENST00000539241 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
CCND1-204ENST00000539241 C19orf44Q9H6X5 657 aa21.13■□□□□ 0.97
CCND1-204ENST00000539241 ATF3P18847 181 aa21.11■□□□□ 0.97
CCND1-204ENST00000539241 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
CCND1-204ENST00000539241 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
CCND1-204ENST00000539241 JCADQ9P266 1359 aa21.1■□□□□ 0.97
CCND1-204ENST00000539241 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
CCND1-204ENST00000539241 CLTCL1P53675 1640 aa21.07■□□□□ 0.96
CCND1-204ENST00000539241 METP08581 1390 aa21.07■□□□□ 0.96
CCND1-204ENST00000539241 NRXN3Q9Y4C0 1643 aa21.07■□□□□ 0.96
CCND1-204ENST00000539241 PHLPP1O60346 1717 aa21.06■□□□□ 0.96
CCND1-204ENST00000539241 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.05■□□□□ 0.96
CCND1-204ENST00000539241 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
CCND1-204ENST00000539241 POTEAQ6S8J7 498 aa21.04■□□□□ 0.96
CCND1-204ENST00000539241 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
CCND1-204ENST00000539241 DCCP43146 1447 aa21.04■□□□□ 0.96
CCND1-204ENST00000539241 XRN1Q8IZH2 1706 aaKnown RBP21.02■□□□□ 0.96
CCND1-204ENST00000539241 BRINP3Q76B58 766 aa21.02■□□□□ 0.96
CCND1-204ENST00000539241 COL16A1Q07092 1604 aaPredicted RBP21.02■□□□□ 0.96
CCND1-204ENST00000539241 AHDC1Q5TGY3 1603 aaPredicted RBP21■□□□□ 0.95
CCND1-204ENST00000539241 VGFO15240 615 aaPredicted RBP20.99■□□□□ 0.95
CCND1-204ENST00000539241 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
CCND1-204ENST00000539241 RPGRIP1LQ68CZ1 1315 aa20.97■□□□□ 0.95
CCND1-204ENST00000539241 MST1RQ04912 1400 aa20.96■□□□□ 0.95
CCND1-204ENST00000539241 ADGRL3Q9HAR2 1447 aa20.96■□□□□ 0.95
CCND1-204ENST00000539241 KIF1BO60333 1816 aa20.95■□□□□ 0.94
CCND1-204ENST00000539241 LRP6O75581 1613 aa20.94■□□□□ 0.94
CCND1-204ENST00000539241 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CCND1-204ENST00000539241 MEX3CQ5U5Q3 659 aaKnown RBP20.94■□□□□ 0.94
CCND1-204ENST00000539241 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
CCND1-204ENST00000539241 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
CCND1-204ENST00000539241 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
CCND1-204ENST00000539241 ROBO2Q9HCK4 1378 aa20.89■□□□□ 0.93
CCND1-204ENST00000539241 SHPRHQ149N8 1683 aa20.88■□□□□ 0.93
CCND1-204ENST00000539241 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
CCND1-204ENST00000539241 NUTM2BA6NNL0 878 aaPredicted RBP20.87■□□□□ 0.93
CCND1-204ENST00000539241 NUTM2EB1AL46 878 aaPredicted RBP20.87■□□□□ 0.93
CCND1-204ENST00000539241 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
CCND1-204ENST00000539241 NUTM2AQ8IVF1 878 aaPredicted RBP20.87■□□□□ 0.93
CCND1-204ENST00000539241 DDX17Q92841 729 aaKnown RBP20.87■□□□□ 0.93
CCND1-204ENST00000539241 MPHOSPH9Q99550 1183 aa20.87■□□□□ 0.93
CCND1-204ENST00000539241 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
CCND1-204ENST00000539241 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
CCND1-204ENST00000539241 NALCNQ8IZF0 1738 aa20.86■□□□□ 0.93
CCND1-204ENST00000539241 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
CCND1-204ENST00000539241 SETD1AO15047 1707 aaKnown RBP20.85■□□□□ 0.93
CCND1-204ENST00000539241 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
CCND1-204ENST00000539241 ADGRF5Q8IZF2 1346 aa20.83■□□□□ 0.93
CCND1-204ENST00000539241 NHSL1Q5SYE7 1610 aa20.83■□□□□ 0.93
CCND1-204ENST00000539241 SPATA31E1Q6ZUB1 1445 aa20.82■□□□□ 0.92
CCND1-204ENST00000539241 PPLO60437 1756 aa20.82■□□□□ 0.92
CCND1-204ENST00000539241 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
CCND1-204ENST00000539241 ORAI2Q96SN7 254 aa20.8■□□□□ 0.92
CCND1-204ENST00000539241 ANKRD30BQ9BXX2 1392 aa20.8■□□□□ 0.92
CCND1-204ENST00000539241 AFF2P51816 1311 aa20.78■□□□□ 0.92
CCND1-204ENST00000539241 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
CCND1-204ENST00000539241 RXRBP28702 533 aa20.76■□□□□ 0.91
CCND1-204ENST00000539241 STK26Q9P289 416 aa20.76■□□□□ 0.91
CCND1-204ENST00000539241 SOS2Q07890 1332 aaPredicted RBP20.76■□□□□ 0.91
CCND1-204ENST00000539241 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
CCND1-204ENST00000539241 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
CCND1-204ENST00000539241 TECPR2O15040 1411 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms