RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
CCND1-202ENST00000535993 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
CCND1-202ENST00000535993 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCND1-202ENST00000535993 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
CCND1-202ENST00000535993 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
CCND1-202ENST00000535993 RIMS2Q9UQ26 1411 aa18.57■□□□□ 0.56
CCND1-202ENST00000535993 GCC2Q8IWJ2 1684 aa18.57■□□□□ 0.56
CCND1-202ENST00000535993 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
CCND1-202ENST00000535993 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
CCND1-202ENST00000535993 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
CCND1-202ENST00000535993 IQGAP3Q86VI3 1631 aa18.53■□□□□ 0.56
CCND1-202ENST00000535993 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
CCND1-202ENST00000535993 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
CCND1-202ENST00000535993 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
CCND1-202ENST00000535993 TBX22Q9Y458 520 aa18.52■□□□□ 0.56
CCND1-202ENST00000535993 E9PCH4 1651 aa18.51■□□□□ 0.55
CCND1-202ENST00000535993 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
CCND1-202ENST00000535993 RBM33Q96EV2 1170 aaKnown RBP18.5■□□□□ 0.55
CCND1-202ENST00000535993 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
CCND1-202ENST00000535993 MSH6P52701 1360 aa18.49■□□□□ 0.55
CCND1-202ENST00000535993 NUTM2DQ5VT03 806 aaPredicted RBP18.48■□□□□ 0.55
CCND1-202ENST00000535993 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
CCND1-202ENST00000535993 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
CCND1-202ENST00000535993 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
CCND1-202ENST00000535993 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
CCND1-202ENST00000535993 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
CCND1-202ENST00000535993 ADAMTS13Q76LX8 1427 aa18.43■□□□□ 0.54
CCND1-202ENST00000535993 C14orf37Q86TY3 774 aa18.43■□□□□ 0.54
CCND1-202ENST00000535993 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
CCND1-202ENST00000535993 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
CCND1-202ENST00000535993 CHD2O14647 1828 aaKnown RBP18.42■□□□□ 0.54
CCND1-202ENST00000535993 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
CCND1-202ENST00000535993 NAIPQ13075 1403 aa18.39■□□□□ 0.53
CCND1-202ENST00000535993 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
CCND1-202ENST00000535993 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
CCND1-202ENST00000535993 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
CCND1-202ENST00000535993 ATF3P18847 181 aa18.37■□□□□ 0.53
CCND1-202ENST00000535993 TRPM2O94759 1503 aa18.37■□□□□ 0.53
CCND1-202ENST00000535993 SPHKAPQ2M3C7 1700 aa18.36■□□□□ 0.53
CCND1-202ENST00000535993 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
CCND1-202ENST00000535993 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
CCND1-202ENST00000535993 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
CCND1-202ENST00000535993 RGS17Q9UGC6 210 aaPredicted RBP18.32■□□□□ 0.52
CCND1-202ENST00000535993 JCADQ9P266 1359 aa18.31■□□□□ 0.52
CCND1-202ENST00000535993 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
CCND1-202ENST00000535993 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
CCND1-202ENST00000535993 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
CCND1-202ENST00000535993 METP08581 1390 aa18.29■□□□□ 0.52
CCND1-202ENST00000535993 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
CCND1-202ENST00000535993 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
CCND1-202ENST00000535993 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
CCND1-202ENST00000535993 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.27■□□□□ 0.52
CCND1-202ENST00000535993 DCCP43146 1447 aa18.27■□□□□ 0.52
CCND1-202ENST00000535993 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
CCND1-202ENST00000535993 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
CCND1-202ENST00000535993 KIF1BO60333 1816 aa18.24■□□□□ 0.51
CCND1-202ENST00000535993 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
CCND1-202ENST00000535993 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
CCND1-202ENST00000535993 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
CCND1-202ENST00000535993 POTEAQ6S8J7 498 aa18.23■□□□□ 0.51
CCND1-202ENST00000535993 COL16A1Q07092 1604 aaPredicted RBP18.22■□□□□ 0.51
CCND1-202ENST00000535993 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
CCND1-202ENST00000535993 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
CCND1-202ENST00000535993 ADGRL3Q9HAR2 1447 aa18.2■□□□□ 0.5
CCND1-202ENST00000535993 MST1RQ04912 1400 aa18.19■□□□□ 0.5
CCND1-202ENST00000535993 FOXD1Q16676 465 aa18.17■□□□□ 0.5
CCND1-202ENST00000535993 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
CCND1-202ENST00000535993 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
CCND1-202ENST00000535993 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
CCND1-202ENST00000535993 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
CCND1-202ENST00000535993 ASXL1Q8IXJ9 1541 aa18.16■□□□□ 0.5
CCND1-202ENST00000535993 ZNF772Q68DY9 489 aaPredicted RBP18.15■□□□□ 0.5
CCND1-202ENST00000535993 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
CCND1-202ENST00000535993 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
CCND1-202ENST00000535993 LRP6O75581 1613 aa18.13■□□□□ 0.49
CCND1-202ENST00000535993 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
CCND1-202ENST00000535993 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
CCND1-202ENST00000535993 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
CCND1-202ENST00000535993 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
CCND1-202ENST00000535993 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
CCND1-202ENST00000535993 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
CCND1-202ENST00000535993 PRAG1Q86YV5 1406 aa18.12■□□□□ 0.49
CCND1-202ENST00000535993 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
CCND1-202ENST00000535993 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
CCND1-202ENST00000535993 PPLO60437 1756 aa18.09■□□□□ 0.49
CCND1-202ENST00000535993 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
CCND1-202ENST00000535993 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
CCND1-202ENST00000535993 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
CCND1-202ENST00000535993 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
CCND1-202ENST00000535993 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
CCND1-202ENST00000535993 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
CCND1-202ENST00000535993 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
CCND1-202ENST00000535993 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
CCND1-202ENST00000535993 RXRBP28702 533 aa18.04■□□□□ 0.48
CCND1-202ENST00000535993 STK26Q9P289 416 aa18.04■□□□□ 0.48
CCND1-202ENST00000535993 AFF2P51816 1311 aa18.03■□□□□ 0.48
CCND1-202ENST00000535993 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
CCND1-202ENST00000535993 SOS2Q07890 1332 aaPredicted RBP18.02■□□□□ 0.48
CCND1-202ENST00000535993 TECPR2O15040 1411 aa18.01■□□□□ 0.47
CCND1-202ENST00000535993 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms