RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 SPHKAPQ2M3C7 1700 aa32.62■■■□□ 2.81
VPS51-214ENST00000534124 RIMS2Q9UQ26 1411 aa32.6■■■□□ 2.81
VPS51-214ENST00000534124 NKTRP30414 1462 aaKnown RBP32.58■■■□□ 2.81
VPS51-214ENST00000534124 PLEKHG1Q9ULL1 1385 aa32.57■■■□□ 2.8
VPS51-214ENST00000534124 HSPA1LP34931 641 aa32.56■■■□□ 2.8
VPS51-214ENST00000534124 CHD2O14647 1828 aaKnown RBP32.54■■■□□ 2.8
VPS51-214ENST00000534124 HDGFP51858 240 aaKnown RBP32.53■■■□□ 2.8
VPS51-214ENST00000534124 SLC26A8Q96RN1 970 aa32.53■■■□□ 2.8
VPS51-214ENST00000534124 KCNA6P17658 529 aa32.52■■■□□ 2.8
VPS51-214ENST00000534124 DIP2AQ14689 1571 aa32.51■■■□□ 2.79
VPS51-214ENST00000534124 NAIPQ13075 1403 aa32.51■■■□□ 2.79
VPS51-214ENST00000534124 PPP1R15AO75807 674 aaPredicted RBP32.5■■■□□ 2.79
VPS51-214ENST00000534124 TMEM94Q12767 1356 aa32.47■■■□□ 2.79
VPS51-214ENST00000534124 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.47■■■□□ 2.79
VPS51-214ENST00000534124 MED1Q15648 1581 aaPredicted RBP32.46■■■□□ 2.79
VPS51-214ENST00000534124 BCANQ96GW7 911 aa32.46■■■□□ 2.79
VPS51-214ENST00000534124 CHGAP10645 457 aaKnown RBP32.45■■■□□ 2.79
VPS51-214ENST00000534124 HFM1A2PYH4 1435 aa32.44■■■□□ 2.78
VPS51-214ENST00000534124 TRPM2O94759 1503 aa32.42■■■□□ 2.78
VPS51-214ENST00000534124 ILDR2Q71H61 639 aa32.4■■■□□ 2.78
VPS51-214ENST00000534124 ADAMTS13Q76LX8 1427 aa32.4■■■□□ 2.78
VPS51-214ENST00000534124 CLTCL1P53675 1640 aa32.39■■■□□ 2.78
VPS51-214ENST00000534124 PROSER2Q86WR7 435 aaPredicted RBP32.38■■■□□ 2.77
VPS51-214ENST00000534124 KIF1BO60333 1816 aa32.37■■■□□ 2.77
VPS51-214ENST00000534124 TBX22Q9Y458 520 aa32.37■■■□□ 2.77
VPS51-214ENST00000534124 PIK3R4Q99570 1358 aa32.35■■■□□ 2.77
VPS51-214ENST00000534124 ROBO1Q9Y6N7 1651 aa32.35■■■□□ 2.77
VPS51-214ENST00000534124 FAM135BQ49AJ0 1406 aa32.34■■■□□ 2.77
VPS51-214ENST00000534124 NRXN3Q9Y4C0 1643 aa32.34■■■□□ 2.77
VPS51-214ENST00000534124 SETBP1Q9Y6X0 1596 aa32.33■■■□□ 2.77
VPS51-214ENST00000534124 SENP3Q9H4L4 574 aaPredicted RBP32.33■■■□□ 2.77
VPS51-214ENST00000534124 MSH6P52701 1360 aa32.32■■■□□ 2.77
VPS51-214ENST00000534124 NUTM2DQ5VT03 806 aaPredicted RBP32.3■■■□□ 2.76
VPS51-214ENST00000534124 NCOA3Q9Y6Q9 1424 aa32.29■■■□□ 2.76
VPS51-214ENST00000534124 NEXMIFQ5QGS0 1516 aa32.28■■■□□ 2.76
VPS51-214ENST00000534124 RBM33Q96EV2 1170 aaKnown RBP32.27■■■□□ 2.76
VPS51-214ENST00000534124 XRN1Q8IZH2 1706 aaKnown RBP32.26■■■□□ 2.76
VPS51-214ENST00000534124 SOCS7O14512 581 aa32.22■■■□□ 2.75
VPS51-214ENST00000534124 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.21■■■□□ 2.75
VPS51-214ENST00000534124 ZNF326Q5BKZ1 582 aaKnown RBP32.21■■■□□ 2.75
VPS51-214ENST00000534124 TRIM52Q96A61 297 aa32.2■■■□□ 2.75
VPS51-214ENST00000534124 PTPRUQ92729 1446 aa32.17■■■□□ 2.74
VPS51-214ENST00000534124 PHLPP1O60346 1717 aa32.16■■■□□ 2.74
VPS51-214ENST00000534124 SLC4A1APQ9BWU0 796 aaKnown RBP32.15■■■□□ 2.74
VPS51-214ENST00000534124 PPLO60437 1756 aa32.13■■■□□ 2.73
VPS51-214ENST00000534124 SLAIN2Q9P270 581 aa32.13■■■□□ 2.73
VPS51-214ENST00000534124 SETD1AO15047 1707 aaKnown RBP32.12■■■□□ 2.73
VPS51-214ENST00000534124 C14orf37Q86TY3 774 aa32.11■■■□□ 2.73
VPS51-214ENST00000534124 AMOTL2Q9Y2J4 779 aa32.11■■■□□ 2.73
VPS51-214ENST00000534124 PHF23Q9BUL5 403 aaPredicted RBP32.1■■■□□ 2.73
VPS51-214ENST00000534124 DCCP43146 1447 aa32.09■■■□□ 2.73
VPS51-214ENST00000534124 C19orf44Q9H6X5 657 aa32.08■■■□□ 2.73
VPS51-214ENST00000534124 METP08581 1390 aa32.07■■■□□ 2.73
VPS51-214ENST00000534124 CADPS2Q86UW7 1296 aa32.07■■■□□ 2.72
VPS51-214ENST00000534124 COL16A1Q07092 1604 aaPredicted RBP32.07■■■□□ 2.72
VPS51-214ENST00000534124 AHDC1Q5TGY3 1603 aaPredicted RBP32.04■■■□□ 2.72
VPS51-214ENST00000534124 ATF3P18847 181 aa32.03■■■□□ 2.72
VPS51-214ENST00000534124 RPGRIP1LQ68CZ1 1315 aa32.02■■■□□ 2.72
VPS51-214ENST00000534124 NALCNQ8IZF0 1738 aa32.02■■■□□ 2.72
VPS51-214ENST00000534124 VGFO15240 615 aaPredicted RBP32■■■□□ 2.71
VPS51-214ENST00000534124 IFT172Q9UG01 1749 aa32■■■□□ 2.71
VPS51-214ENST00000534124 CCDC144AA2RUR9 1427 aa32■■■□□ 2.71
VPS51-214ENST00000534124 ADGRL3Q9HAR2 1447 aa31.98■■■□□ 2.71
VPS51-214ENST00000534124 ACIN1Q9UKV3 1341 aaKnown RBP31.98■■■□□ 2.71
VPS51-214ENST00000534124 PTCH1Q13635 1447 aa31.97■■■□□ 2.71
VPS51-214ENST00000534124 PRAG1Q86YV5 1406 aa31.97■■■□□ 2.71
VPS51-214ENST00000534124 JCADQ9P266 1359 aa31.95■■■□□ 2.71
VPS51-214ENST00000534124 SHPRHQ149N8 1683 aa31.93■■■□□ 2.7
VPS51-214ENST00000534124 FOXD1Q16676 465 aa31.93■■■□□ 2.7
VPS51-214ENST00000534124 MPHOSPH9Q99550 1183 aa31.92■■■□□ 2.7
VPS51-214ENST00000534124 MST1RQ04912 1400 aa31.92■■■□□ 2.7
VPS51-214ENST00000534124 SPATA31E1Q6ZUB1 1445 aa31.92■■■□□ 2.7
VPS51-214ENST00000534124 ASXL1Q8IXJ9 1541 aa31.91■■■□□ 2.7
VPS51-214ENST00000534124 NHSL1Q5SYE7 1610 aa31.91■■■□□ 2.7
VPS51-214ENST00000534124 SETD5Q9C0A6 1442 aa31.91■■■□□ 2.7
VPS51-214ENST00000534124 BRINP3Q76B58 766 aa31.86■■■□□ 2.69
VPS51-214ENST00000534124 RGS17Q9UGC6 210 aaPredicted RBP31.85■■■□□ 2.69
VPS51-214ENST00000534124 ANKRD30BQ9BXX2 1392 aa31.83■■■□□ 2.69
VPS51-214ENST00000534124 ROBO2Q9HCK4 1378 aa31.82■■■□□ 2.69
VPS51-214ENST00000534124 SPATA31A6Q5VVP1 1343 aa31.8■■■□□ 2.68
VPS51-214ENST00000534124 KNDC1Q76NI1 1749 aa31.79■■■□□ 2.68
VPS51-214ENST00000534124 RAB3GAP2Q9H2M9 1393 aa31.78■■■□□ 2.68
VPS51-214ENST00000534124 LAMC1P11047 1609 aa31.78■■■□□ 2.68
VPS51-214ENST00000534124 LRP6O75581 1613 aa31.77■■■□□ 2.68
VPS51-214ENST00000534124 PIK3C2GO75747 1445 aa31.76■■■□□ 2.68
VPS51-214ENST00000534124 ADGRF5Q8IZF2 1346 aa31.75■■■□□ 2.67
VPS51-214ENST00000534124 CDC42BPGQ6DT37 1551 aa31.75■■■□□ 2.67
VPS51-214ENST00000534124 C1orf167Q5SNV9 1468 aa31.74■■■□□ 2.67
VPS51-214ENST00000534124 RGL3Q3MIN7 710 aa31.74■■■□□ 2.67
VPS51-214ENST00000534124 TECPR2O15040 1411 aa31.74■■■□□ 2.67
VPS51-214ENST00000534124 MYOM2P54296 1465 aa31.7■■■□□ 2.66
VPS51-214ENST00000534124 NRXN1Q9ULB1 1477 aa31.68■■■□□ 2.66
VPS51-214ENST00000534124 LRPPRCP42704 1394 aaKnown RBP31.67■■■□□ 2.66
VPS51-214ENST00000534124 POTEAQ6S8J7 498 aa31.66■■■□□ 2.66
VPS51-214ENST00000534124 MEX3CQ5U5Q3 659 aaKnown RBP31.62■■■□□ 2.65
VPS51-214ENST00000534124 LRRC59Q96AG4 307 aaKnown RBP31.62■■■□□ 2.65
VPS51-214ENST00000534124 ABCC11Q96J66 1382 aa31.62■■■□□ 2.65
VPS51-214ENST00000534124 YTHDC2Q9H6S0 1430 aaKnown RBP31.59■■■□□ 2.65
VPS51-214ENST00000534124 PNPLA6Q8IY17 1366 aa31.58■■■□□ 2.65
VPS51-214ENST00000534124 FMN2Q9NZ56 1722 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms