RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 ILDR2Q71H61 639 aa26.59■■□□□ 1.85
VPS51-213ENST00000533827 SLC26A8Q96RN1 970 aa26.59■■□□□ 1.85
VPS51-213ENST00000533827 KCNA6P17658 529 aa26.57■■□□□ 1.84
VPS51-213ENST00000533827 RIMS2Q9UQ26 1411 aa26.56■■□□□ 1.84
VPS51-213ENST00000533827 PLEKHG1Q9ULL1 1385 aa26.55■■□□□ 1.84
VPS51-213ENST00000533827 HDGFP51858 240 aaKnown RBP26.53■■□□□ 1.84
VPS51-213ENST00000533827 NWD1Q149M9 1564 aa26.53■■□□□ 1.84
VPS51-213ENST00000533827 TMEM94Q12767 1356 aa26.51■■□□□ 1.83
VPS51-213ENST00000533827 CHGAP10645 457 aaKnown RBP26.51■■□□□ 1.83
VPS51-213ENST00000533827 BCANQ96GW7 911 aa26.5■■□□□ 1.83
VPS51-213ENST00000533827 PPP1R15AO75807 674 aaPredicted RBP26.49■■□□□ 1.83
VPS51-213ENST00000533827 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.49■■□□□ 1.83
VPS51-213ENST00000533827 NKTRP30414 1462 aaKnown RBP26.49■■□□□ 1.83
VPS51-213ENST00000533827 PROSER2Q86WR7 435 aaPredicted RBP26.47■■□□□ 1.83
VPS51-213ENST00000533827 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
VPS51-213ENST00000533827 NAIPQ13075 1403 aa26.47■■□□□ 1.83
VPS51-213ENST00000533827 SPHKAPQ2M3C7 1700 aa26.46■■□□□ 1.83
VPS51-213ENST00000533827 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
VPS51-213ENST00000533827 MED1Q15648 1581 aaPredicted RBP26.45■■□□□ 1.82
VPS51-213ENST00000533827 TBX22Q9Y458 520 aa26.44■■□□□ 1.82
VPS51-213ENST00000533827 NUTM2DQ5VT03 806 aaPredicted RBP26.43■■□□□ 1.82
VPS51-213ENST00000533827 RBM33Q96EV2 1170 aaKnown RBP26.43■■□□□ 1.82
VPS51-213ENST00000533827 ADAMTS13Q76LX8 1427 aa26.42■■□□□ 1.82
VPS51-213ENST00000533827 FAM135BQ49AJ0 1406 aa26.4■■□□□ 1.82
VPS51-213ENST00000533827 DIP2AQ14689 1571 aa26.4■■□□□ 1.82
VPS51-213ENST00000533827 SOCS7O14512 581 aa26.39■■□□□ 1.82
VPS51-213ENST00000533827 HFM1A2PYH4 1435 aa26.38■■□□□ 1.81
VPS51-213ENST00000533827 PIK3R4Q99570 1358 aa26.35■■□□□ 1.81
VPS51-213ENST00000533827 TRPM2O94759 1503 aa26.34■■□□□ 1.81
VPS51-213ENST00000533827 MSH6P52701 1360 aa26.34■■□□□ 1.81
VPS51-213ENST00000533827 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
VPS51-213ENST00000533827 ROBO1Q9Y6N7 1651 aa26.33■■□□□ 1.81
VPS51-213ENST00000533827 NCOA3Q9Y6Q9 1424 aa26.31■■□□□ 1.8
VPS51-213ENST00000533827 NRXN3Q9Y4C0 1643 aa26.3■■□□□ 1.8
VPS51-213ENST00000533827 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
VPS51-213ENST00000533827 ZNF326Q5BKZ1 582 aaKnown RBP26.28■■□□□ 1.8
VPS51-213ENST00000533827 TRIM52Q96A61 297 aa26.28■■□□□ 1.8
VPS51-213ENST00000533827 SLAIN2Q9P270 581 aa26.27■■□□□ 1.8
VPS51-213ENST00000533827 PTPRUQ92729 1446 aa26.27■■□□□ 1.8
VPS51-213ENST00000533827 NEXMIFQ5QGS0 1516 aa26.26■■□□□ 1.79
VPS51-213ENST00000533827 KIF1BO60333 1816 aa26.25■■□□□ 1.79
VPS51-213ENST00000533827 AMOTL2Q9Y2J4 779 aa26.25■■□□□ 1.79
VPS51-213ENST00000533827 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
VPS51-213ENST00000533827 SLC4A1APQ9BWU0 796 aaKnown RBP26.22■■□□□ 1.79
VPS51-213ENST00000533827 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
VPS51-213ENST00000533827 XRN1Q8IZH2 1706 aaKnown RBP26.21■■□□□ 1.79
VPS51-213ENST00000533827 C19orf44Q9H6X5 657 aa26.2■■□□□ 1.78
VPS51-213ENST00000533827 C14orf37Q86TY3 774 aa26.19■■□□□ 1.78
VPS51-213ENST00000533827 METP08581 1390 aa26.18■■□□□ 1.78
VPS51-213ENST00000533827 CADPS2Q86UW7 1296 aa26.16■■□□□ 1.78
VPS51-213ENST00000533827 PHLPP1O60346 1717 aa26.16■■□□□ 1.78
VPS51-213ENST00000533827 ATF3P18847 181 aa26.14■■□□□ 1.78
VPS51-213ENST00000533827 VGFO15240 615 aaPredicted RBP26.11■■□□□ 1.77
VPS51-213ENST00000533827 DCCP43146 1447 aa26.11■■□□□ 1.77
VPS51-213ENST00000533827 RPGRIP1LQ68CZ1 1315 aa26.11■■□□□ 1.77
VPS51-213ENST00000533827 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
VPS51-213ENST00000533827 RGS17Q9UGC6 210 aaPredicted RBP26.1■■□□□ 1.77
VPS51-213ENST00000533827 FOXD1Q16676 465 aa26.09■■□□□ 1.77
VPS51-213ENST00000533827 SETD1AO15047 1707 aaKnown RBP26.08■■□□□ 1.77
VPS51-213ENST00000533827 PPLO60437 1756 aa26.07■■□□□ 1.76
VPS51-213ENST00000533827 JCADQ9P266 1359 aa26.07■■□□□ 1.76
VPS51-213ENST00000533827 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
VPS51-213ENST00000533827 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
VPS51-213ENST00000533827 BRINP3Q76B58 766 aa26.03■■□□□ 1.76
VPS51-213ENST00000533827 MST1RQ04912 1400 aa26.03■■□□□ 1.76
VPS51-213ENST00000533827 ADGRL3Q9HAR2 1447 aa26.03■■□□□ 1.76
VPS51-213ENST00000533827 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
VPS51-213ENST00000533827 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
VPS51-213ENST00000533827 PTCH1Q13635 1447 aa26■■□□□ 1.75
VPS51-213ENST00000533827 SPATA31E1Q6ZUB1 1445 aa25.99■■□□□ 1.75
VPS51-213ENST00000533827 PRAG1Q86YV5 1406 aa25.99■■□□□ 1.75
VPS51-213ENST00000533827 SETD5Q9C0A6 1442 aa25.98■■□□□ 1.75
VPS51-213ENST00000533827 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
VPS51-213ENST00000533827 ASXL1Q8IXJ9 1541 aa25.98■■□□□ 1.75
VPS51-213ENST00000533827 ROBO2Q9HCK4 1378 aa25.96■■□□□ 1.75
VPS51-213ENST00000533827 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
VPS51-213ENST00000533827 SPATA31A6Q5VVP1 1343 aa25.95■■□□□ 1.75
VPS51-213ENST00000533827 IFT172Q9UG01 1749 aa25.95■■□□□ 1.74
VPS51-213ENST00000533827 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
VPS51-213ENST00000533827 POTEAQ6S8J7 498 aa25.94■■□□□ 1.74
VPS51-213ENST00000533827 NHSL1Q5SYE7 1610 aa25.94■■□□□ 1.74
VPS51-213ENST00000533827 RGL3Q3MIN7 710 aa25.93■■□□□ 1.74
VPS51-213ENST00000533827 LRP6O75581 1613 aa25.92■■□□□ 1.74
VPS51-213ENST00000533827 ANKRD30BQ9BXX2 1392 aa25.91■■□□□ 1.74
VPS51-213ENST00000533827 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
VPS51-213ENST00000533827 RAB3GAP2Q9H2M9 1393 aa25.87■■□□□ 1.73
VPS51-213ENST00000533827 PIK3C2GO75747 1445 aa25.85■■□□□ 1.73
VPS51-213ENST00000533827 DDX17Q92841 729 aaKnown RBP25.84■■□□□ 1.73
VPS51-213ENST00000533827 LRRC59Q96AG4 307 aaKnown RBP25.83■■□□□ 1.73
VPS51-213ENST00000533827 LAMC1P11047 1609 aa25.83■■□□□ 1.73
VPS51-213ENST00000533827 TECPR2O15040 1411 aa25.82■■□□□ 1.72
VPS51-213ENST00000533827 MEX3CQ5U5Q3 659 aaKnown RBP25.81■■□□□ 1.72
VPS51-213ENST00000533827 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
VPS51-213ENST00000533827 ORAI2Q96SN7 254 aa25.8■■□□□ 1.72
VPS51-213ENST00000533827 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
VPS51-213ENST00000533827 KNDC1Q76NI1 1749 aa25.79■■□□□ 1.72
VPS51-213ENST00000533827 ABCC11Q96J66 1382 aa25.79■■□□□ 1.72
VPS51-213ENST00000533827 TMEM132EQ6IEE7 984 aa25.78■■□□□ 1.72
VPS51-213ENST00000533827 STK26Q9P289 416 aa25.78■■□□□ 1.72
VPS51-213ENST00000533827 NRXN1Q9ULB1 1477 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms