RNA–Protein interactions for RNA: ENST00000533498.1

RPL38-206, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RPL38, Length 532 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-206ENST00000533498 IQGAP3Q86VI3 1631 aa18.04■□□□□ 0.48
RPL38-206ENST00000533498 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
RPL38-206ENST00000533498 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
RPL38-206ENST00000533498 E9PCH4 1651 aa18.03■□□□□ 0.48
RPL38-206ENST00000533498 ZFYVE9O95405 1425 aa18.02■□□□□ 0.48
RPL38-206ENST00000533498 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
RPL38-206ENST00000533498 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
RPL38-206ENST00000533498 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
RPL38-206ENST00000533498 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
RPL38-206ENST00000533498 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
RPL38-206ENST00000533498 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
RPL38-206ENST00000533498 RIMS2Q9UQ26 1411 aa17.97■□□□□ 0.47
RPL38-206ENST00000533498 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.47
RPL38-206ENST00000533498 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPL38-206ENST00000533498 NCOA3Q9Y6Q9 1424 aa17.95■□□□□ 0.46
RPL38-206ENST00000533498 MSH6P52701 1360 aa17.94■□□□□ 0.46
RPL38-206ENST00000533498 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
RPL38-206ENST00000533498 BCANQ96GW7 911 aa17.93■□□□□ 0.46
RPL38-206ENST00000533498 TBX22Q9Y458 520 aa17.92■□□□□ 0.46
RPL38-206ENST00000533498 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
RPL38-206ENST00000533498 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
RPL38-206ENST00000533498 NUP155O75694 1391 aa17.9■□□□□ 0.46
RPL38-206ENST00000533498 PHLPP1O60346 1717 aa17.89■□□□□ 0.46
RPL38-206ENST00000533498 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
RPL38-206ENST00000533498 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
RPL38-206ENST00000533498 TRPM2O94759 1503 aa17.88■□□□□ 0.45
RPL38-206ENST00000533498 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
RPL38-206ENST00000533498 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
RPL38-206ENST00000533498 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.85■□□□□ 0.45
RPL38-206ENST00000533498 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
RPL38-206ENST00000533498 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
RPL38-206ENST00000533498 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
RPL38-206ENST00000533498 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
RPL38-206ENST00000533498 KIF1BO60333 1816 aa17.82■□□□□ 0.44
RPL38-206ENST00000533498 NRXN3Q9Y4C0 1643 aa17.81■□□□□ 0.44
RPL38-206ENST00000533498 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
RPL38-206ENST00000533498 C19orf44Q9H6X5 657 aa17.81■□□□□ 0.44
RPL38-206ENST00000533498 RGS17Q9UGC6 210 aaPredicted RBP17.81■□□□□ 0.44
RPL38-206ENST00000533498 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
RPL38-206ENST00000533498 JCADQ9P266 1359 aa17.8■□□□□ 0.44
RPL38-206ENST00000533498 ITGAEP38570 1179 aa17.8■□□□□ 0.44
RPL38-206ENST00000533498 DCCP43146 1447 aa17.8■□□□□ 0.44
RPL38-206ENST00000533498 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
RPL38-206ENST00000533498 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
RPL38-206ENST00000533498 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
RPL38-206ENST00000533498 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
RPL38-206ENST00000533498 ATF3P18847 181 aa17.77■□□□□ 0.44
RPL38-206ENST00000533498 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
RPL38-206ENST00000533498 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
RPL38-206ENST00000533498 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
RPL38-206ENST00000533498 SPATA31A6Q5VVP1 1343 aa17.74■□□□□ 0.43
RPL38-206ENST00000533498 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
RPL38-206ENST00000533498 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
RPL38-206ENST00000533498 NAIPQ13075 1403 aa17.73■□□□□ 0.43
RPL38-206ENST00000533498 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
RPL38-206ENST00000533498 NHSL1Q5SYE7 1610 aa17.7■□□□□ 0.42
RPL38-206ENST00000533498 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
RPL38-206ENST00000533498 POTEAQ6S8J7 498 aa17.69■□□□□ 0.42
RPL38-206ENST00000533498 ASXL1Q8IXJ9 1541 aa17.68■□□□□ 0.42
RPL38-206ENST00000533498 SETD1AO15047 1707 aaKnown RBP17.68■□□□□ 0.42
RPL38-206ENST00000533498 METP08581 1390 aa17.67■□□□□ 0.42
RPL38-206ENST00000533498 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
RPL38-206ENST00000533498 PPLO60437 1756 aa17.66■□□□□ 0.42
RPL38-206ENST00000533498 MST1RQ04912 1400 aa17.66■□□□□ 0.42
RPL38-206ENST00000533498 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
RPL38-206ENST00000533498 BRINP3Q76B58 766 aa17.66■□□□□ 0.42
RPL38-206ENST00000533498 LRP6O75581 1613 aa17.65■□□□□ 0.42
RPL38-206ENST00000533498 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
RPL38-206ENST00000533498 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
RPL38-206ENST00000533498 VGFO15240 615 aaPredicted RBP17.64■□□□□ 0.41
RPL38-206ENST00000533498 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
RPL38-206ENST00000533498 LAMC1P11047 1609 aa17.63■□□□□ 0.41
RPL38-206ENST00000533498 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
RPL38-206ENST00000533498 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
RPL38-206ENST00000533498 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
RPL38-206ENST00000533498 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
RPL38-206ENST00000533498 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
RPL38-206ENST00000533498 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
RPL38-206ENST00000533498 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
RPL38-206ENST00000533498 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
RPL38-206ENST00000533498 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
RPL38-206ENST00000533498 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
RPL38-206ENST00000533498 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
RPL38-206ENST00000533498 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
RPL38-206ENST00000533498 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.39
RPL38-206ENST00000533498 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
RPL38-206ENST00000533498 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
RPL38-206ENST00000533498 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
RPL38-206ENST00000533498 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
RPL38-206ENST00000533498 RXRBP28702 533 aa17.5■□□□□ 0.39
RPL38-206ENST00000533498 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
RPL38-206ENST00000533498 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
RPL38-206ENST00000533498 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
RPL38-206ENST00000533498 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
RPL38-206ENST00000533498 TECPR2O15040 1411 aa17.48■□□□□ 0.39
RPL38-206ENST00000533498 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
RPL38-206ENST00000533498 AFF2P51816 1311 aa17.47■□□□□ 0.39
RPL38-206ENST00000533498 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
RPL38-206ENST00000533498 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
RPL38-206ENST00000533498 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms