RNA–Protein interactions for RNA: ENST00000532630.1

NR1H3-234, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-234ENST00000532630 ROBO1Q9Y6N7 1651 aa23.25■■□□□ 1.31
NR1H3-234ENST00000532630 PPP1R15AO75807 674 aaPredicted RBP23.23■■□□□ 1.31
NR1H3-234ENST00000532630 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
NR1H3-234ENST00000532630 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
NR1H3-234ENST00000532630 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
NR1H3-234ENST00000532630 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
NR1H3-234ENST00000532630 NWD1Q149M9 1564 aa23.2■■□□□ 1.3
NR1H3-234ENST00000532630 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
NR1H3-234ENST00000532630 MSH6P52701 1360 aa23.18■■□□□ 1.3
NR1H3-234ENST00000532630 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
NR1H3-234ENST00000532630 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
NR1H3-234ENST00000532630 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
NR1H3-234ENST00000532630 TMEM131LA2VDJ0 1609 aa23.16■■□□□ 1.3
NR1H3-234ENST00000532630 UNC13BO14795 1591 aa23.16■■□□□ 1.3
NR1H3-234ENST00000532630 E9PCH4 1651 aa23.15■■□□□ 1.3
NR1H3-234ENST00000532630 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.29
NR1H3-234ENST00000532630 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
NR1H3-234ENST00000532630 ZFYVE9O95405 1425 aa23.13■■□□□ 1.29
NR1H3-234ENST00000532630 RGS17Q9UGC6 210 aaPredicted RBP23.12■■□□□ 1.29
NR1H3-234ENST00000532630 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
NR1H3-234ENST00000532630 ITGAEP38570 1179 aa23.1■■□□□ 1.29
NR1H3-234ENST00000532630 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
NR1H3-234ENST00000532630 SLAIN2Q9P270 581 aa23.09■■□□□ 1.29
NR1H3-234ENST00000532630 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
NR1H3-234ENST00000532630 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
NR1H3-234ENST00000532630 NUP155O75694 1391 aa23.03■■□□□ 1.28
NR1H3-234ENST00000532630 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
NR1H3-234ENST00000532630 DIP2AQ14689 1571 aa23.03■■□□□ 1.28
NR1H3-234ENST00000532630 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
NR1H3-234ENST00000532630 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
NR1H3-234ENST00000532630 JCADQ9P266 1359 aa23.01■■□□□ 1.27
NR1H3-234ENST00000532630 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
NR1H3-234ENST00000532630 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
NR1H3-234ENST00000532630 ATF3P18847 181 aa22.99■■□□□ 1.27
NR1H3-234ENST00000532630 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
NR1H3-234ENST00000532630 TRPM2O94759 1503 aa22.98■■□□□ 1.27
NR1H3-234ENST00000532630 COL16A1Q07092 1604 aaPredicted RBP22.98■■□□□ 1.27
NR1H3-234ENST00000532630 SETD1AO15047 1707 aaKnown RBP22.97■■□□□ 1.27
NR1H3-234ENST00000532630 NCOA3Q9Y6Q9 1424 aa22.97■■□□□ 1.27
NR1H3-234ENST00000532630 CADPS2Q86UW7 1296 aa22.96■■□□□ 1.27
NR1H3-234ENST00000532630 MEX3CQ5U5Q3 659 aaKnown RBP22.95■■□□□ 1.26
NR1H3-234ENST00000532630 PIK3R4Q99570 1358 aa22.95■■□□□ 1.26
NR1H3-234ENST00000532630 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
NR1H3-234ENST00000532630 C19orf44Q9H6X5 657 aa22.94■■□□□ 1.26
NR1H3-234ENST00000532630 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
NR1H3-234ENST00000532630 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
NR1H3-234ENST00000532630 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
NR1H3-234ENST00000532630 KIF1BO60333 1816 aa22.89■■□□□ 1.26
NR1H3-234ENST00000532630 PTPRUQ92729 1446 aa22.89■■□□□ 1.25
NR1H3-234ENST00000532630 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
NR1H3-234ENST00000532630 NRXN3Q9Y4C0 1643 aa22.87■■□□□ 1.25
NR1H3-234ENST00000532630 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
NR1H3-234ENST00000532630 LRP6O75581 1613 aa22.86■■□□□ 1.25
NR1H3-234ENST00000532630 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
NR1H3-234ENST00000532630 NUTM2BA6NNL0 878 aaPredicted RBP22.84■■□□□ 1.25
NR1H3-234ENST00000532630 NUTM2EB1AL46 878 aaPredicted RBP22.84■■□□□ 1.25
NR1H3-234ENST00000532630 NUTM2AQ8IVF1 878 aaPredicted RBP22.84■■□□□ 1.25
NR1H3-234ENST00000532630 BRINP3Q76B58 766 aa22.83■■□□□ 1.25
NR1H3-234ENST00000532630 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
NR1H3-234ENST00000532630 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
NR1H3-234ENST00000532630 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
NR1H3-234ENST00000532630 DCCP43146 1447 aa22.81■■□□□ 1.24
NR1H3-234ENST00000532630 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
NR1H3-234ENST00000532630 METP08581 1390 aa22.78■■□□□ 1.24
NR1H3-234ENST00000532630 NALCNQ8IZF0 1738 aa22.78■■□□□ 1.24
NR1H3-234ENST00000532630 NHSL1Q5SYE7 1610 aa22.78■■□□□ 1.24
NR1H3-234ENST00000532630 NEXMIFQ5QGS0 1516 aa22.77■■□□□ 1.24
NR1H3-234ENST00000532630 MST1RQ04912 1400 aa22.76■■□□□ 1.23
NR1H3-234ENST00000532630 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
NR1H3-234ENST00000532630 RXRBP28702 533 aa22.72■■□□□ 1.23
NR1H3-234ENST00000532630 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
NR1H3-234ENST00000532630 DDX17Q92841 729 aaKnown RBP22.7■■□□□ 1.22
NR1H3-234ENST00000532630 AFF2P51816 1311 aa22.7■■□□□ 1.22
NR1H3-234ENST00000532630 NAIPQ13075 1403 aa22.7■■□□□ 1.22
NR1H3-234ENST00000532630 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
NR1H3-234ENST00000532630 RRBP1Q9P2E9 1410 aaKnown RBP22.68■■□□□ 1.22
NR1H3-234ENST00000532630 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
NR1H3-234ENST00000532630 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
NR1H3-234ENST00000532630 PPLO60437 1756 aa22.66■■□□□ 1.22
NR1H3-234ENST00000532630 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.22
NR1H3-234ENST00000532630 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
NR1H3-234ENST00000532630 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
NR1H3-234ENST00000532630 C1orf167Q5SNV9 1468 aa22.62■■□□□ 1.21
NR1H3-234ENST00000532630 ADAMTS2O95450 1211 aa22.61■■□□□ 1.21
NR1H3-234ENST00000532630 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
NR1H3-234ENST00000532630 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
NR1H3-234ENST00000532630 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
NR1H3-234ENST00000532630 QTRT2Q9H974 415 aaKnown RBP22.59■■□□□ 1.21
NR1H3-234ENST00000532630 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
NR1H3-234ENST00000532630 RPGRIP1LQ68CZ1 1315 aa22.58■■□□□ 1.21
NR1H3-234ENST00000532630 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
NR1H3-234ENST00000532630 ORAI2Q96SN7 254 aa22.58■■□□□ 1.21
NR1H3-234ENST00000532630 RBM6P78332 1123 aaKnown RBP22.55■■□□□ 1.2
NR1H3-234ENST00000532630 LAMC1P11047 1609 aa22.55■■□□□ 1.2
NR1H3-234ENST00000532630 FOXD1Q16676 465 aa22.53■■□□□ 1.2
NR1H3-234ENST00000532630 RGS12O14924 1447 aa22.53■■□□□ 1.2
NR1H3-234ENST00000532630 RGL3Q3MIN7 710 aa22.51■■□□□ 1.19
NR1H3-234ENST00000532630 SOS2Q07890 1332 aaPredicted RBP22.51■■□□□ 1.19
NR1H3-234ENST00000532630 ESCO1Q5FWF5 840 aa22.5■■□□□ 1.19
NR1H3-234ENST00000532630 STK26Q9P289 416 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms