RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	CLCN1	P35523	988 aa		13.98	□□□□□ -0.17
PPP6R3-223	ENST00000531432	GOLGA8CP	A6NN73	597 aa		13.97	□□□□□ -0.17
PPP6R3-223	ENST00000531432	NEUROD2	Q15784	382 aa		13.97	□□□□□ -0.17
PPP6R3-223	ENST00000531432	DAXX	Q9UER7	740 aa	Predicted RBP	13.97	□□□□□ -0.17
PPP6R3-223	ENST00000531432	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.96	□□□□□ -0.17
PPP6R3-223	ENST00000531432	SPNS2	Q8IVW8	549 aa		13.95	□□□□□ -0.18
PPP6R3-223	ENST00000531432	WNT2B	Q93097	391 aa		13.94	□□□□□ -0.18
PPP6R3-223	ENST00000531432	ANKK1	Q8NFD2	765 aa		13.93	□□□□□ -0.18
PPP6R3-223	ENST00000531432	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP6R3-223	ENST00000531432	BCAM	P50895	628 aa		13.92	□□□□□ -0.18
PPP6R3-223	ENST00000531432	HDGF	P51858	240 aa	Known RBP	13.92	□□□□□ -0.18
PPP6R3-223	ENST00000531432	LRCH3	Q96II8	777 aa		13.92	□□□□□ -0.18
PPP6R3-223	ENST00000531432	KDM4C	Q9H3R0	1056 aa		13.92	□□□□□ -0.18
PPP6R3-223	ENST00000531432	MYT1L	Q9UL68	1186 aa		13.92	□□□□□ -0.18
PPP6R3-223	ENST00000531432	KCTD12	Q96CX2	325 aa	Known RBP	13.91	□□□□□ -0.18
PPP6R3-223	ENST00000531432	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.91	□□□□□ -0.18
PPP6R3-223	ENST00000531432	SOWAHB	A6NEL2	793 aa		13.9	□□□□□ -0.18
PPP6R3-223	ENST00000531432	MS4A1	P11836	297 aa		13.9	□□□□□ -0.18
PPP6R3-223	ENST00000531432	DDX11L8	A8MPP1	907 aa		13.89	□□□□□ -0.19
PPP6R3-223	ENST00000531432	RNF40	O75150	1001 aa		13.89	□□□□□ -0.19
PPP6R3-223	ENST00000531432	SSTR3	P32745	418 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP6R3-223	ENST00000531432	SLF2	Q8IX21	1173 aa		13.88	□□□□□ -0.19
PPP6R3-223	ENST00000531432	SLC10A3	P09131	477 aa		13.87	□□□□□ -0.19
PPP6R3-223	ENST00000531432	THSD4	Q6ZMP0	1018 aa		13.87	□□□□□ -0.19
PPP6R3-223	ENST00000531432	CD46	P15529	392 aa		13.85	□□□□□ -0.19
PPP6R3-223	ENST00000531432	SULF1	Q8IWU6	871 aa		13.85	□□□□□ -0.19
PPP6R3-223	ENST00000531432	RDH13	Q8NBN7	331 aa		13.84	□□□□□ -0.19
PPP6R3-223	ENST00000531432	HPS5	Q9UPZ3	1129 aa		13.84	□□□□□ -0.19
PPP6R3-223	ENST00000531432	SLC4A3	P48751	1232 aa		13.82	□□□□□ -0.2
PPP6R3-223	ENST00000531432	RNF166	Q96A37	237 aa	Predicted RBP	13.81	□□□□□ -0.2
PPP6R3-223	ENST00000531432	FAM117A	Q9C073	453 aa		13.81	□□□□□ -0.2
PPP6R3-223	ENST00000531432	TSR3	Q9UJK0	312 aa	Known RBP	13.81	□□□□□ -0.2
PPP6R3-223	ENST00000531432	PPP4C	P60510	307 aa		13.79	□□□□□ -0.2
PPP6R3-223	ENST00000531432	BEGAIN	Q9BUH8	593 aa		13.79	□□□□□ -0.2
PPP6R3-223	ENST00000531432	WBP1L	Q9NX94	342 aa		13.79	□□□□□ -0.2
PPP6R3-223	ENST00000531432	MMRN1	Q13201	1228 aa		13.78	□□□□□ -0.2
PPP6R3-223	ENST00000531432	CFH	P08603	1231 aa		13.77	□□□□□ -0.21
PPP6R3-223	ENST00000531432	PTPN5	P54829	565 aa		13.77	□□□□□ -0.21
PPP6R3-223	ENST00000531432	RSPH4A	Q5TD94	716 aa		13.77	□□□□□ -0.21
PPP6R3-223	ENST00000531432	GCGR	P47871	477 aa		13.76	□□□□□ -0.21
PPP6R3-223	ENST00000531432	PLEKHG3	A1L390	1219 aa		13.75	□□□□□ -0.21
PPP6R3-223	ENST00000531432	NECTIN2	Q92692	538 aa		13.74	□□□□□ -0.21
PPP6R3-223	ENST00000531432	APLP1	P51693	650 aa		13.73	□□□□□ -0.21
PPP6R3-223	ENST00000531432	IL27	Q8NEV9	243 aa		13.73	□□□□□ -0.21
PPP6R3-223	ENST00000531432	DDRGK1	Q96HY6	314 aa		13.73	□□□□□ -0.21
PPP6R3-223	ENST00000531432	KMT5B	Q4FZB7	885 aa		13.71	□□□□□ -0.21
PPP6R3-223	ENST00000531432	SPIRE2	Q8WWL2	714 aa		13.69	□□□□□ -0.22
PPP6R3-223	ENST00000531432	ACTN4	O43707	911 aa	Known RBP	13.68	□□□□□ -0.22
PPP6R3-223	ENST00000531432	KDM4A	O75164	1064 aa		13.68	□□□□□ -0.22
PPP6R3-223	ENST00000531432	TBC1D2	Q9BYX2	928 aa		13.68	□□□□□ -0.22
PPP6R3-223	ENST00000531432	FUT2	Q10981	343 aa		13.67	□□□□□ -0.22
PPP6R3-223	ENST00000531432	NUTM1	Q86Y26	1132 aa		13.67	□□□□□ -0.22
PPP6R3-223	ENST00000531432	PRR14	Q9BWN1	585 aa		13.66	□□□□□ -0.22
PPP6R3-223	ENST00000531432	NYAP1	Q6ZVC0	841 aa		13.65	□□□□□ -0.22
PPP6R3-223	ENST00000531432	HCST	Q9UBK5	93 aa		13.65	□□□□□ -0.22
PPP6R3-223	ENST00000531432	HOXA2	O43364	376 aa		13.63	□□□□□ -0.23
PPP6R3-223	ENST00000531432	MYSM1	Q5VVJ2	828 aa		13.63	□□□□□ -0.23
PPP6R3-223	ENST00000531432	HLA-C	Q95604	372 aa		13.63	□□□□□ -0.23
PPP6R3-223	ENST00000531432	MOXD2P	A6NHM9	499 aa		13.62	□□□□□ -0.23
PPP6R3-223	ENST00000531432	USP46	P62068	366 aa		13.62	□□□□□ -0.23
PPP6R3-223	ENST00000531432	PUS10	Q3MIT2	529 aa	Known RBP	13.62	□□□□□ -0.23
PPP6R3-223	ENST00000531432	ATP6V1A	P38606	617 aa		13.61	□□□□□ -0.23
PPP6R3-223	ENST00000531432	DIXDC1	Q155Q3	683 aa		13.61	□□□□□ -0.23
PPP6R3-223	ENST00000531432	PCDHB3	Q9Y5E6	796 aa		13.61	□□□□□ -0.23
PPP6R3-223	ENST00000531432	NDUFV2	P19404	249 aa		13.6	□□□□□ -0.23
PPP6R3-223	ENST00000531432	GUCA2A	Q02747	115 aa		13.59	□□□□□ -0.23
PPP6R3-223	ENST00000531432	SH3D19	Q5HYK7	790 aa		13.59	□□□□□ -0.23
PPP6R3-223	ENST00000531432	RSPH6A	Q9H0K4	717 aa		13.59	□□□□□ -0.23
PPP6R3-223	ENST00000531432	MORN1	Q5T089	497 aa		13.58	□□□□□ -0.24
PPP6R3-223	ENST00000531432	BLOC1S3	Q6QNY0	202 aa		13.58	□□□□□ -0.24
PPP6R3-223	ENST00000531432	POLR3E	Q9NVU0	708 aa		13.57	□□□□□ -0.24
PPP6R3-223	ENST00000531432	COPS2	P61201	443 aa		13.56	□□□□□ -0.24
PPP6R3-223	ENST00000531432	TMEM132A	Q24JP5	1023 aa		13.56	□□□□□ -0.24
PPP6R3-223	ENST00000531432	GRIPAP1	Q4V328	841 aa		13.56	□□□□□ -0.24
PPP6R3-223	ENST00000531432	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.56	□□□□□ -0.24
PPP6R3-223	ENST00000531432	LIMD1	Q9UGP4	676 aa		13.56	□□□□□ -0.24
PPP6R3-223	ENST00000531432	SPTLC1	O15269	473 aa		13.55	□□□□□ -0.24
PPP6R3-223	ENST00000531432	SKIV2L	Q15477	1246 aa	Known RBP	13.55	□□□□□ -0.24
PPP6R3-223	ENST00000531432	RIC3	Q7Z5B4	369 aa		13.55	□□□□□ -0.24
PPP6R3-223	ENST00000531432	MTR	Q99707	1265 aa		13.55	□□□□□ -0.24
PPP6R3-223	ENST00000531432	FDX1	P10109	184 aa		13.54	□□□□□ -0.24
PPP6R3-223	ENST00000531432	CLK2	P49760	499 aa	Known RBP	13.54	□□□□□ -0.24
PPP6R3-223	ENST00000531432	PCDHGC3	Q9UN70	934 aa		13.54	□□□□□ -0.24
PPP6R3-223	ENST00000531432	SLC27A5	Q9Y2P5	690 aa		13.54	□□□□□ -0.24
PPP6R3-223	ENST00000531432	TJAP1	Q5JTD0	557 aa		13.53	□□□□□ -0.24
PPP6R3-223	ENST00000531432	GOPC	Q9HD26	462 aa		13.53	□□□□□ -0.24
PPP6R3-223	ENST00000531432	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.52	□□□□□ -0.25
PPP6R3-223	ENST00000531432	SCUBE3	Q8IX30	993 aa		13.51	□□□□□ -0.25
PPP6R3-223	ENST00000531432	PCDHB15	Q9Y5E8	787 aa		13.51	□□□□□ -0.25
PPP6R3-223	ENST00000531432	NR1I2	O75469	434 aa		13.5	□□□□□ -0.25
PPP6R3-223	ENST00000531432	GJA5	P36382	358 aa		13.5	□□□□□ -0.25
PPP6R3-223	ENST00000531432	CSPP1	Q1MSJ5	1256 aa		13.49	□□□□□ -0.25
PPP6R3-223	ENST00000531432	ZNF516	Q92618	1163 aa		13.49	□□□□□ -0.25
PPP6R3-223	ENST00000531432	IL21	Q9HBE4	155 aa		13.49	□□□□□ -0.25
PPP6R3-223	ENST00000531432	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.48	□□□□□ -0.25
PPP6R3-223	ENST00000531432	PLSCR2	Q9NRY7	297 aa		13.48	□□□□□ -0.25
PPP6R3-223	ENST00000531432	TUSC1	Q2TAM9	212 aa		13.47	□□□□□ -0.25
PPP6R3-223	ENST00000531432	RNF19B	Q6ZMZ0	732 aa		13.47	□□□□□ -0.25
PPP6R3-223	ENST00000531432	SYMPK	Q92797	1274 aa	Known RBP	13.47	□□□□□ -0.25
PPP6R3-223	ENST00000531432	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms