RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 E9PCH4 1651 aa18.59■□□□□ 0.57
CHD7-207ENST00000527921 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
CHD7-207ENST00000527921 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
CHD7-207ENST00000527921 FAM135BQ49AJ0 1406 aa18.56■□□□□ 0.56
CHD7-207ENST00000527921 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
CHD7-207ENST00000527921 NKTRP30414 1462 aaKnown RBP18.55■□□□□ 0.56
CHD7-207ENST00000527921 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
CHD7-207ENST00000527921 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
CHD7-207ENST00000527921 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
CHD7-207ENST00000527921 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
CHD7-207ENST00000527921 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
CHD7-207ENST00000527921 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
CHD7-207ENST00000527921 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
CHD7-207ENST00000527921 NUP155O75694 1391 aa18.49■□□□□ 0.55
CHD7-207ENST00000527921 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
CHD7-207ENST00000527921 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
CHD7-207ENST00000527921 HDGFP51858 240 aaKnown RBP18.46■□□□□ 0.55
CHD7-207ENST00000527921 BCANQ96GW7 911 aa18.46■□□□□ 0.55
CHD7-207ENST00000527921 RGS17Q9UGC6 210 aaPredicted RBP18.46■□□□□ 0.55
CHD7-207ENST00000527921 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
CHD7-207ENST00000527921 ITGAEP38570 1179 aa18.45■□□□□ 0.54
CHD7-207ENST00000527921 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHD7-207ENST00000527921 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
CHD7-207ENST00000527921 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
CHD7-207ENST00000527921 MSH6P52701 1360 aa18.43■□□□□ 0.54
CHD7-207ENST00000527921 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
CHD7-207ENST00000527921 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
CHD7-207ENST00000527921 NUTM2DQ5VT03 806 aaPredicted RBP18.43■□□□□ 0.54
CHD7-207ENST00000527921 SLAIN2Q9P270 581 aa18.42■□□□□ 0.54
CHD7-207ENST00000527921 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
CHD7-207ENST00000527921 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
CHD7-207ENST00000527921 SPHKAPQ2M3C7 1700 aa18.41■□□□□ 0.54
CHD7-207ENST00000527921 NRXN3Q9Y4C0 1643 aa18.4■□□□□ 0.54
CHD7-207ENST00000527921 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
CHD7-207ENST00000527921 TRPM2O94759 1503 aa18.38■□□□□ 0.53
CHD7-207ENST00000527921 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
CHD7-207ENST00000527921 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
CHD7-207ENST00000527921 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
CHD7-207ENST00000527921 NAIPQ13075 1403 aa18.36■□□□□ 0.53
CHD7-207ENST00000527921 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
CHD7-207ENST00000527921 CLTCL1P53675 1640 aa18.34■□□□□ 0.53
CHD7-207ENST00000527921 XRN1Q8IZH2 1706 aaKnown RBP18.34■□□□□ 0.53
CHD7-207ENST00000527921 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
CHD7-207ENST00000527921 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
CHD7-207ENST00000527921 NEXMIFQ5QGS0 1516 aa18.32■□□□□ 0.52
CHD7-207ENST00000527921 POTEAQ6S8J7 498 aa18.31■□□□□ 0.52
CHD7-207ENST00000527921 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
CHD7-207ENST00000527921 METP08581 1390 aa18.3■□□□□ 0.52
CHD7-207ENST00000527921 JCADQ9P266 1359 aa18.3■□□□□ 0.52
CHD7-207ENST00000527921 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
CHD7-207ENST00000527921 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
CHD7-207ENST00000527921 DCCP43146 1447 aa18.28■□□□□ 0.52
CHD7-207ENST00000527921 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
CHD7-207ENST00000527921 C14orf37Q86TY3 774 aa18.27■□□□□ 0.52
CHD7-207ENST00000527921 ATF3P18847 181 aa18.26■□□□□ 0.51
CHD7-207ENST00000527921 LRP6O75581 1613 aa18.26■□□□□ 0.51
CHD7-207ENST00000527921 KIF1BO60333 1816 aa18.26■□□□□ 0.51
CHD7-207ENST00000527921 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
CHD7-207ENST00000527921 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
CHD7-207ENST00000527921 MST1RQ04912 1400 aa18.23■□□□□ 0.51
CHD7-207ENST00000527921 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
CHD7-207ENST00000527921 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
CHD7-207ENST00000527921 SPATA31A6Q5VVP1 1343 aa18.22■□□□□ 0.51
CHD7-207ENST00000527921 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
CHD7-207ENST00000527921 ADGRL3Q9HAR2 1447 aa18.2■□□□□ 0.5
CHD7-207ENST00000527921 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
CHD7-207ENST00000527921 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
CHD7-207ENST00000527921 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
CHD7-207ENST00000527921 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
CHD7-207ENST00000527921 PPLO60437 1756 aa18.17■□□□□ 0.5
CHD7-207ENST00000527921 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
CHD7-207ENST00000527921 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
CHD7-207ENST00000527921 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
CHD7-207ENST00000527921 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
CHD7-207ENST00000527921 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
CHD7-207ENST00000527921 LAMC1P11047 1609 aa18.12■□□□□ 0.49
CHD7-207ENST00000527921 FOXD1Q16676 465 aa18.12■□□□□ 0.49
CHD7-207ENST00000527921 C1orf167Q5SNV9 1468 aa18.12■□□□□ 0.49
CHD7-207ENST00000527921 DDX17Q92841 729 aaKnown RBP18.11■□□□□ 0.49
CHD7-207ENST00000527921 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
CHD7-207ENST00000527921 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
CHD7-207ENST00000527921 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
CHD7-207ENST00000527921 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.49
CHD7-207ENST00000527921 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
CHD7-207ENST00000527921 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
CHD7-207ENST00000527921 ADGRF5Q8IZF2 1346 aa18.06■□□□□ 0.48
CHD7-207ENST00000527921 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
CHD7-207ENST00000527921 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
CHD7-207ENST00000527921 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
CHD7-207ENST00000527921 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
CHD7-207ENST00000527921 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
CHD7-207ENST00000527921 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
CHD7-207ENST00000527921 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
CHD7-207ENST00000527921 TECPR2O15040 1411 aa18.03■□□□□ 0.48
CHD7-207ENST00000527921 AFF2P51816 1311 aa18.02■□□□□ 0.48
CHD7-207ENST00000527921 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.48
CHD7-207ENST00000527921 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
CHD7-207ENST00000527921 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
CHD7-207ENST00000527921 PIK3C2GO75747 1445 aa18■□□□□ 0.47
CHD7-207ENST00000527921 RXRBP28702 533 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms