RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RBM10P98175 930 aaKnown RBP16.61■□□□□ 0.25
LRRK1-202ENST00000525284 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
LRRK1-202ENST00000525284 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
LRRK1-202ENST00000525284 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
LRRK1-202ENST00000525284 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
LRRK1-202ENST00000525284 PDE4AP27815 886 aa16.6■□□□□ 0.25
LRRK1-202ENST00000525284 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
LRRK1-202ENST00000525284 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
LRRK1-202ENST00000525284 KIAA0754O94854 1291 aa16.59■□□□□ 0.25
LRRK1-202ENST00000525284 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
LRRK1-202ENST00000525284 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
LRRK1-202ENST00000525284 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
LRRK1-202ENST00000525284 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
LRRK1-202ENST00000525284 NFXL1Q6ZNB6 911 aa16.57■□□□□ 0.24
LRRK1-202ENST00000525284 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
LRRK1-202ENST00000525284 NOL10Q9BSC4 688 aaKnown RBP16.57■□□□□ 0.24
LRRK1-202ENST00000525284 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
LRRK1-202ENST00000525284 CCDC39Q9UFE4 941 aa16.57■□□□□ 0.24
LRRK1-202ENST00000525284 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
LRRK1-202ENST00000525284 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
LRRK1-202ENST00000525284 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
LRRK1-202ENST00000525284 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
LRRK1-202ENST00000525284 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
LRRK1-202ENST00000525284 CENPHQ9H3R5 247 aa16.54■□□□□ 0.24
LRRK1-202ENST00000525284 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
LRRK1-202ENST00000525284 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
LRRK1-202ENST00000525284 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
LRRK1-202ENST00000525284 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
LRRK1-202ENST00000525284 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
LRRK1-202ENST00000525284 RALBP1Q15311 655 aa16.53■□□□□ 0.24
LRRK1-202ENST00000525284 TAX1BP1Q86VP1 789 aa16.53■□□□□ 0.24
LRRK1-202ENST00000525284 SOGA1O94964 1423 aa16.53■□□□□ 0.24
LRRK1-202ENST00000525284 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
LRRK1-202ENST00000525284 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.24
LRRK1-202ENST00000525284 GOLGA6L10A6NI86 522 aa16.52■□□□□ 0.23
LRRK1-202ENST00000525284 ELL2O00472 640 aaPredicted RBP16.52■□□□□ 0.23
LRRK1-202ENST00000525284 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.23
LRRK1-202ENST00000525284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.52■□□□□ 0.23
LRRK1-202ENST00000525284 RUFY2Q8WXA3 655 aa16.52■□□□□ 0.23
LRRK1-202ENST00000525284 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-202ENST00000525284 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
LRRK1-202ENST00000525284 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
LRRK1-202ENST00000525284 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-202ENST00000525284 TRDNQ13061 729 aa16.51■□□□□ 0.23
LRRK1-202ENST00000525284 GIMAP7Q8NHV1 300 aa16.51■□□□□ 0.23
LRRK1-202ENST00000525284 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
LRRK1-202ENST00000525284 KDM4AO75164 1064 aa16.5■□□□□ 0.23
LRRK1-202ENST00000525284 SMC2O95347 1197 aa16.5■□□□□ 0.23
LRRK1-202ENST00000525284 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
LRRK1-202ENST00000525284 ERICH2A1L162 156 aa16.5■□□□□ 0.23
LRRK1-202ENST00000525284 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
LRRK1-202ENST00000525284 CCAR1Q8IX12 1150 aaKnown RBP16.5■□□□□ 0.23
LRRK1-202ENST00000525284 ERLIN2O94905 339 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 PLIN1O60240 522 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 REC8O95072 547 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-202ENST00000525284 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
LRRK1-202ENST00000525284 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-202ENST00000525284 IBSPP21815 317 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-202ENST00000525284 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 KANK1Q14678 1352 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
LRRK1-202ENST00000525284 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
LRRK1-202ENST00000525284 EZRP15311 586 aaKnown RBP16.48■□□□□ 0.23
LRRK1-202ENST00000525284 FAM193AP78312 1265 aa16.48■□□□□ 0.23
LRRK1-202ENST00000525284 ERICH4A6NGS2 130 aa16.47■□□□□ 0.23
LRRK1-202ENST00000525284 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
LRRK1-202ENST00000525284 EEA1Q15075 1411 aa16.47■□□□□ 0.23
LRRK1-202ENST00000525284 NF2P35240 595 aa16.46■□□□□ 0.23
LRRK1-202ENST00000525284 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
LRRK1-202ENST00000525284 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.22
LRRK1-202ENST00000525284 USP8P40818 1118 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 AMPHP49418 695 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
LRRK1-202ENST00000525284 SMARCE1Q969G3 411 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 SYCP1Q15431 976 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
LRRK1-202ENST00000525284 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
LRRK1-202ENST00000525284 NUCB2P80303 420 aa16.44■□□□□ 0.22
LRRK1-202ENST00000525284 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
LRRK1-202ENST00000525284 CCDC97Q96F63 343 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-202ENST00000525284 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
LRRK1-202ENST00000525284 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
LRRK1-202ENST00000525284 NACADO15069 1562 aa16.43■□□□□ 0.22
LRRK1-202ENST00000525284 MRE11P49959 708 aa16.43■□□□□ 0.22
LRRK1-202ENST00000525284 SPC24Q8NBT2 197 aa16.43■□□□□ 0.22
LRRK1-202ENST00000525284 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
LRRK1-202ENST00000525284 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
LRRK1-202ENST00000525284 CCDC181Q5TID7 509 aa16.42■□□□□ 0.22
LRRK1-202ENST00000525284 CCP110O43303 1012 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
LRRK1-202ENST00000525284 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
LRRK1-202ENST00000525284 GOLGA6L10A0A0M3HER8 536 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms