RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 APLP1P51693 650 aa13.33□□□□□ -0.28
COPB1-203ENST00000525214 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
COPB1-203ENST00000525214 MAP2K5Q13163 448 aa13.32□□□□□ -0.28
COPB1-203ENST00000525214 NLRP7Q8WX94 980 aa13.32□□□□□ -0.28
COPB1-203ENST00000525214 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
COPB1-203ENST00000525214 IRF6O14896 467 aa13.28□□□□□ -0.28
COPB1-203ENST00000525214 SLC10A3P09131 477 aa13.27□□□□□ -0.29
COPB1-203ENST00000525214 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
COPB1-203ENST00000525214 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
COPB1-203ENST00000525214 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
COPB1-203ENST00000525214 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
COPB1-203ENST00000525214 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
COPB1-203ENST00000525214 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
COPB1-203ENST00000525214 ZMYND10O75800 440 aa13.23□□□□□ -0.29
COPB1-203ENST00000525214 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
COPB1-203ENST00000525214 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
COPB1-203ENST00000525214 MTRQ99707 1265 aa13.22□□□□□ -0.29
COPB1-203ENST00000525214 KCNC4Q03721 635 aa13.21□□□□□ -0.29
COPB1-203ENST00000525214 CFHP08603 1231 aa13.2□□□□□ -0.3
COPB1-203ENST00000525214 A0A0G2JS52 829 aa13.18□□□□□ -0.3
COPB1-203ENST00000525214 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
COPB1-203ENST00000525214 PRR14Q9BWN1 585 aa13.17□□□□□ -0.3
COPB1-203ENST00000525214 IL21Q9HBE4 155 aa13.16□□□□□ -0.3
COPB1-203ENST00000525214 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
COPB1-203ENST00000525214 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
COPB1-203ENST00000525214 COPS2P61201 443 aa13.15□□□□□ -0.3
COPB1-203ENST00000525214 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
COPB1-203ENST00000525214 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
COPB1-203ENST00000525214 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
COPB1-203ENST00000525214 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
COPB1-203ENST00000525214 BCANQ96GW7 911 aa13.13□□□□□ -0.31
COPB1-203ENST00000525214 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
COPB1-203ENST00000525214 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
COPB1-203ENST00000525214 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
COPB1-203ENST00000525214 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
COPB1-203ENST00000525214 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
COPB1-203ENST00000525214 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
COPB1-203ENST00000525214 ZPR1O75312 459 aa13.08□□□□□ -0.32
COPB1-203ENST00000525214 CD46P15529 392 aa13.07□□□□□ -0.32
COPB1-203ENST00000525214 GCGRP47871 477 aa13.07□□□□□ -0.32
COPB1-203ENST00000525214 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
COPB1-203ENST00000525214 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
COPB1-203ENST00000525214 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
COPB1-203ENST00000525214 CLCN1P35523 988 aa13.04□□□□□ -0.32
COPB1-203ENST00000525214 FUT2Q10981 343 aa13.04□□□□□ -0.32
COPB1-203ENST00000525214 AMHR2Q16671 573 aa13.04□□□□□ -0.32
COPB1-203ENST00000525214 TLL1O43897 1013 aa13.03□□□□□ -0.32
COPB1-203ENST00000525214 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
COPB1-203ENST00000525214 MORN1Q5T089 497 aa13□□□□□ -0.33
COPB1-203ENST00000525214 PPP1R18Q6NYC8 613 aa13□□□□□ -0.33
COPB1-203ENST00000525214 TRIM66O15016 1216 aa12.99□□□□□ -0.33
COPB1-203ENST00000525214 NR1I2O75469 434 aa12.99□□□□□ -0.33
COPB1-203ENST00000525214 RGS20O76081 388 aa12.99□□□□□ -0.33
COPB1-203ENST00000525214 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
COPB1-203ENST00000525214 AK7Q96M32 723 aa12.99□□□□□ -0.33
COPB1-203ENST00000525214 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
COPB1-203ENST00000525214 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
COPB1-203ENST00000525214 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
COPB1-203ENST00000525214 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
COPB1-203ENST00000525214 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
COPB1-203ENST00000525214 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
COPB1-203ENST00000525214 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
COPB1-203ENST00000525214 KDM4AO75164 1064 aa12.93□□□□□ -0.34
COPB1-203ENST00000525214 ADH1BP00325 375 aa12.93□□□□□ -0.34
COPB1-203ENST00000525214 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
COPB1-203ENST00000525214 THAP11Q96EK4 314 aa12.93□□□□□ -0.34
COPB1-203ENST00000525214 HLA-CQ95604 372 aa12.91□□□□□ -0.34
COPB1-203ENST00000525214 S1PR4O95977 384 aa12.9□□□□□ -0.34
COPB1-203ENST00000525214 SPSB2Q99619 263 aa12.89□□□□□ -0.35
COPB1-203ENST00000525214 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
COPB1-203ENST00000525214 HOXA2O43364 376 aa12.88□□□□□ -0.35
COPB1-203ENST00000525214 USP46P62068 366 aa12.88□□□□□ -0.35
COPB1-203ENST00000525214 PDE4DQ08499 809 aa12.88□□□□□ -0.35
COPB1-203ENST00000525214 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
COPB1-203ENST00000525214 GGCXP38435 758 aa12.87□□□□□ -0.35
COPB1-203ENST00000525214 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
COPB1-203ENST00000525214 MS4A1P11836 297 aa12.86□□□□□ -0.35
COPB1-203ENST00000525214 BRICD5Q6PL45 260 aa12.86□□□□□ -0.35
COPB1-203ENST00000525214 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
COPB1-203ENST00000525214 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
COPB1-203ENST00000525214 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
COPB1-203ENST00000525214 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
COPB1-203ENST00000525214 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
COPB1-203ENST00000525214 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
COPB1-203ENST00000525214 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
COPB1-203ENST00000525214 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
COPB1-203ENST00000525214 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
COPB1-203ENST00000525214 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
COPB1-203ENST00000525214 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
COPB1-203ENST00000525214 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
COPB1-203ENST00000525214 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
COPB1-203ENST00000525214 Q3C1V9 767 aa12.79□□□□□ -0.36
COPB1-203ENST00000525214 V9GY48 417 aaPredicted RBP12.79□□□□□ -0.36
COPB1-203ENST00000525214 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
COPB1-203ENST00000525214 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
COPB1-203ENST00000525214 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
COPB1-203ENST00000525214 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
COPB1-203ENST00000525214 NDUFV2P19404 249 aa12.76□□□□□ -0.37
COPB1-203ENST00000525214 SYMPKQ92797 1274 aaKnown RBP12.75□□□□□ -0.37
COPB1-203ENST00000525214 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms