RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 OATP04181 439 aa12.66□□□□□ -0.38
LINC01609-202ENST00000522778 FECHP22830 423 aa12.66□□□□□ -0.38
LINC01609-202ENST00000522778 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
LINC01609-202ENST00000522778 MTRQ99707 1265 aa12.65□□□□□ -0.38
LINC01609-202ENST00000522778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
LINC01609-202ENST00000522778 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
LINC01609-202ENST00000522778 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
LINC01609-202ENST00000522778 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
LINC01609-202ENST00000522778 PRR14Q9BWN1 585 aa12.6□□□□□ -0.39
LINC01609-202ENST00000522778 COPS2P61201 443 aa12.59□□□□□ -0.39
LINC01609-202ENST00000522778 RGS20O76081 388 aa12.56□□□□□ -0.4
LINC01609-202ENST00000522778 CFHP08603 1231 aa12.56□□□□□ -0.4
LINC01609-202ENST00000522778 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
LINC01609-202ENST00000522778 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
LINC01609-202ENST00000522778 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
LINC01609-202ENST00000522778 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
LINC01609-202ENST00000522778 SLC10A3P09131 477 aa12.53□□□□□ -0.4
LINC01609-202ENST00000522778 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
LINC01609-202ENST00000522778 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
LINC01609-202ENST00000522778 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
LINC01609-202ENST00000522778 BLOC1S3Q6QNY0 202 aa12.49□□□□□ -0.41
LINC01609-202ENST00000522778 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
LINC01609-202ENST00000522778 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
LINC01609-202ENST00000522778 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
LINC01609-202ENST00000522778 ZPR1O75312 459 aa12.48□□□□□ -0.41
LINC01609-202ENST00000522778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01609-202ENST00000522778 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
LINC01609-202ENST00000522778 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
LINC01609-202ENST00000522778 PPP1R18Q6NYC8 613 aa12.46□□□□□ -0.41
LINC01609-202ENST00000522778 LMOD2Q6P5Q4 547 aa12.46□□□□□ -0.41
LINC01609-202ENST00000522778 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
LINC01609-202ENST00000522778 IRF6O14896 467 aa12.42□□□□□ -0.42
LINC01609-202ENST00000522778 TLL1O43897 1013 aa12.42□□□□□ -0.42
LINC01609-202ENST00000522778 GGCXP38435 758 aa12.42□□□□□ -0.42
LINC01609-202ENST00000522778 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
LINC01609-202ENST00000522778 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
LINC01609-202ENST00000522778 NR1I2O75469 434 aa12.4□□□□□ -0.42
LINC01609-202ENST00000522778 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
LINC01609-202ENST00000522778 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
LINC01609-202ENST00000522778 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
LINC01609-202ENST00000522778 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
LINC01609-202ENST00000522778 PRKD2Q9BZL6 878 aa12.36□□□□□ -0.43
LINC01609-202ENST00000522778 FUT2Q10981 343 aa12.35□□□□□ -0.43
LINC01609-202ENST00000522778 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
LINC01609-202ENST00000522778 GCGRP47871 477 aa12.34□□□□□ -0.43
LINC01609-202ENST00000522778 SCUBE3Q8IX30 993 aa12.33□□□□□ -0.44
LINC01609-202ENST00000522778 TMUB1Q9BVT8 246 aa12.33□□□□□ -0.44
LINC01609-202ENST00000522778 S1PR4O95977 384 aa12.32□□□□□ -0.44
LINC01609-202ENST00000522778 ADH1BP00325 375 aa12.32□□□□□ -0.44
LINC01609-202ENST00000522778 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
LINC01609-202ENST00000522778 RNF223E7ERA6 249 aa12.3□□□□□ -0.44
LINC01609-202ENST00000522778 MORN1Q5T089 497 aa12.3□□□□□ -0.44
LINC01609-202ENST00000522778 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
LINC01609-202ENST00000522778 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
LINC01609-202ENST00000522778 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
LINC01609-202ENST00000522778 CD46P15529 392 aa12.28□□□□□ -0.44
LINC01609-202ENST00000522778 CLCN1P35523 988 aa12.28□□□□□ -0.44
LINC01609-202ENST00000522778 SPSB2Q99619 263 aa12.28□□□□□ -0.44
LINC01609-202ENST00000522778 SLC6A16Q9GZN6 736 aa12.28□□□□□ -0.44
LINC01609-202ENST00000522778 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
LINC01609-202ENST00000522778 ZMYND10O75800 440 aa12.27□□□□□ -0.45
LINC01609-202ENST00000522778 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
LINC01609-202ENST00000522778 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
LINC01609-202ENST00000522778 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
LINC01609-202ENST00000522778 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
LINC01609-202ENST00000522778 ANKLE1Q8NAG6 615 aa12.24□□□□□ -0.45
LINC01609-202ENST00000522778 KDM4AO75164 1064 aa12.23□□□□□ -0.45
LINC01609-202ENST00000522778 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
LINC01609-202ENST00000522778 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
LINC01609-202ENST00000522778 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
LINC01609-202ENST00000522778 THAP11Q96EK4 314 aa12.21□□□□□ -0.45
LINC01609-202ENST00000522778 SLC19A1P41440 591 aa12.2□□□□□ -0.46
LINC01609-202ENST00000522778 Q6ZNB5 142 aa12.2□□□□□ -0.46
LINC01609-202ENST00000522778 GFRA3O60609 400 aa12.19□□□□□ -0.46
LINC01609-202ENST00000522778 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
LINC01609-202ENST00000522778 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
LINC01609-202ENST00000522778 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
LINC01609-202ENST00000522778 USP46P62068 366 aa12.17□□□□□ -0.46
LINC01609-202ENST00000522778 Q3C1V9 767 aa12.17□□□□□ -0.46
LINC01609-202ENST00000522778 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
LINC01609-202ENST00000522778 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
LINC01609-202ENST00000522778 HLA-CQ95604 372 aa12.16□□□□□ -0.46
LINC01609-202ENST00000522778 PRDM9Q9NQV7 894 aa12.16□□□□□ -0.46
LINC01609-202ENST00000522778 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
LINC01609-202ENST00000522778 HOXA2O43364 376 aa12.15□□□□□ -0.46
LINC01609-202ENST00000522778 AMHR2Q16671 573 aa12.15□□□□□ -0.46
LINC01609-202ENST00000522778 FAM160A2Q8N612 972 aaPredicted RBP12.15□□□□□ -0.46
LINC01609-202ENST00000522778 EMID1Q96A84 441 aaPredicted RBP12.15□□□□□ -0.46
LINC01609-202ENST00000522778 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
LINC01609-202ENST00000522778 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
LINC01609-202ENST00000522778 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
LINC01609-202ENST00000522778 FCF1Q9Y324 198 aaKnown RBP12.14□□□□□ -0.47
LINC01609-202ENST00000522778 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
LINC01609-202ENST00000522778 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
LINC01609-202ENST00000522778 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
LINC01609-202ENST00000522778 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
LINC01609-202ENST00000522778 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
LINC01609-202ENST00000522778 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
LINC01609-202ENST00000522778 GIGYF2Q6Y7W6 1299 aaKnown RBP12.12□□□□□ -0.47
LINC01609-202ENST00000522778 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms