RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
HMGB1P1-201ENST00000522557 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
HMGB1P1-201ENST00000522557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 IRF6O14896 467 aa10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
HMGB1P1-201ENST00000522557 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P1-201ENST00000522557 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
HMGB1P1-201ENST00000522557 ZMYND10O75800 440 aa10.48□□□□□ -0.73
HMGB1P1-201ENST00000522557 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 APLP1P51693 650 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLC10A3P09131 477 aa10.45□□□□□ -0.74
HMGB1P1-201ENST00000522557 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P1-201ENST00000522557 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 CFHP08603 1231 aa10.39□□□□□ -0.75
HMGB1P1-201ENST00000522557 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P1-201ENST00000522557 KCNC4Q03721 635 aa10.38□□□□□ -0.75
HMGB1P1-201ENST00000522557 MTRQ99707 1265 aa10.38□□□□□ -0.75
HMGB1P1-201ENST00000522557 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
HMGB1P1-201ENST00000522557 COPS2P61201 443 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 ZNF516Q92618 1163 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 ACTN4O43707 911 aaKnown RBP10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 KMT5BQ4FZB7 885 aa10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 REPIN1Q9BWE0 567 aaKnown RBP10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 TRIM66O15016 1216 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 CLCN1P35523 988 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 GCGRP47871 477 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 AK7Q96M32 723 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 CD46P15529 392 aa10.3□□□□□ -0.76
HMGB1P1-201ENST00000522557 PUS10Q3MIT2 529 aaKnown RBP10.3□□□□□ -0.76
HMGB1P1-201ENST00000522557 A0A0G2JS52 829 aa10.29□□□□□ -0.76
HMGB1P1-201ENST00000522557 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
HMGB1P1-201ENST00000522557 ZPR1O75312 459 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 FUT2Q10981 343 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 AMHR2Q16671 573 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P1-201ENST00000522557 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P1-201ENST00000522557 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 MORN1Q5T089 497 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 TLL1O43897 1013 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 NR1I2O75469 434 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 KDM4AO75164 1064 aa10.22□□□□□ -0.77
HMGB1P1-201ENST00000522557 PDE4DQ08499 809 aa10.22□□□□□ -0.77
HMGB1P1-201ENST00000522557 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
HMGB1P1-201ENST00000522557 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
HMGB1P1-201ENST00000522557 HLA-CQ95604 372 aa10.19□□□□□ -0.78
HMGB1P1-201ENST00000522557 MS4A1P11836 297 aa10.18□□□□□ -0.78
HMGB1P1-201ENST00000522557 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
HMGB1P1-201ENST00000522557 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 ADH1BP00325 375 aa10.16□□□□□ -0.78
HMGB1P1-201ENST00000522557 THAP11Q96EK4 314 aa10.16□□□□□ -0.78
HMGB1P1-201ENST00000522557 USP46P62068 366 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 GUCA2AQ02747 115 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 SPIRE2Q8WWL2 714 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 SPSB2Q99619 263 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 HOXA2O43364 376 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 S1PR4O95977 384 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 RNF223E7ERA6 249 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 RGS20O76081 388 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 GGCXP38435 758 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 SLC6A16Q9GZN6 736 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P1-201ENST00000522557 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 NDUFV2P19404 249 aa10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
HMGB1P1-201ENST00000522557 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
HMGB1P1-201ENST00000522557 Q3C1V9 767 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 FDX1P10109 184 aa10.07□□□□□ -0.8
HMGB1P1-201ENST00000522557 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
HMGB1P1-201ENST00000522557 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms