RNA–Protein interactions for RNA: ENST00000522183.1

CASC9-203, Transcript of cancer susceptibility 9, humanhuman

TSL 3

Gene CASC9, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-203ENST00000522183 ROBO1Q9Y6N7 1651 aa19.85■□□□□ 0.77
CASC9-203ENST00000522183 FAM135BQ49AJ0 1406 aa19.85■□□□□ 0.77
CASC9-203ENST00000522183 PROSER2Q86WR7 435 aaPredicted RBP19.84■□□□□ 0.77
CASC9-203ENST00000522183 BCANQ96GW7 911 aa19.84■□□□□ 0.77
CASC9-203ENST00000522183 UNC13BO14795 1591 aa19.83■□□□□ 0.77
CASC9-203ENST00000522183 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
CASC9-203ENST00000522183 TMEM131LA2VDJ0 1609 aa19.81■□□□□ 0.76
CASC9-203ENST00000522183 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
CASC9-203ENST00000522183 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
CASC9-203ENST00000522183 CHD2O14647 1828 aaKnown RBP19.79■□□□□ 0.76
CASC9-203ENST00000522183 E9PCH4 1651 aa19.78■□□□□ 0.76
CASC9-203ENST00000522183 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
CASC9-203ENST00000522183 MSH6P52701 1360 aa19.78■□□□□ 0.76
CASC9-203ENST00000522183 PLEKHG1Q9ULL1 1385 aa19.78■□□□□ 0.76
CASC9-203ENST00000522183 RGS17Q9UGC6 210 aaPredicted RBP19.77■□□□□ 0.76
CASC9-203ENST00000522183 IQGAP3Q86VI3 1631 aa19.75■□□□□ 0.75
CASC9-203ENST00000522183 PHLPP1O60346 1717 aa19.73■□□□□ 0.75
CASC9-203ENST00000522183 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
CASC9-203ENST00000522183 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
CASC9-203ENST00000522183 FOXD1Q16676 465 aa19.72■□□□□ 0.75
CASC9-203ENST00000522183 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
CASC9-203ENST00000522183 DIP2AQ14689 1571 aa19.7■□□□□ 0.74
CASC9-203ENST00000522183 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.7■□□□□ 0.74
CASC9-203ENST00000522183 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
CASC9-203ENST00000522183 NUTM2DQ5VT03 806 aaPredicted RBP19.68■□□□□ 0.74
CASC9-203ENST00000522183 TBX22Q9Y458 520 aa19.68■□□□□ 0.74
CASC9-203ENST00000522183 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
CASC9-203ENST00000522183 COL16A1Q07092 1604 aaPredicted RBP19.66■□□□□ 0.74
CASC9-203ENST00000522183 POTEAQ6S8J7 498 aa19.66■□□□□ 0.74
CASC9-203ENST00000522183 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
CASC9-203ENST00000522183 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
CASC9-203ENST00000522183 ITGAEP38570 1179 aa19.65■□□□□ 0.74
CASC9-203ENST00000522183 NUP155O75694 1391 aa19.65■□□□□ 0.74
CASC9-203ENST00000522183 JCADQ9P266 1359 aa19.65■□□□□ 0.74
CASC9-203ENST00000522183 NCOA3Q9Y6Q9 1424 aa19.65■□□□□ 0.74
CASC9-203ENST00000522183 TRPM2O94759 1503 aa19.64■□□□□ 0.73
CASC9-203ENST00000522183 PIK3R4Q99570 1358 aa19.63■□□□□ 0.73
CASC9-203ENST00000522183 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
CASC9-203ENST00000522183 SETD1AO15047 1707 aaKnown RBP19.59■□□□□ 0.73
CASC9-203ENST00000522183 AHDC1Q5TGY3 1603 aaPredicted RBP19.59■□□□□ 0.73
CASC9-203ENST00000522183 ATF3P18847 181 aa19.59■□□□□ 0.73
CASC9-203ENST00000522183 CADPS2Q86UW7 1296 aa19.59■□□□□ 0.73
CASC9-203ENST00000522183 NRXN3Q9Y4C0 1643 aa19.58■□□□□ 0.73
CASC9-203ENST00000522183 C19orf44Q9H6X5 657 aa19.58■□□□□ 0.72
CASC9-203ENST00000522183 PTPRUQ92729 1446 aa19.58■□□□□ 0.72
CASC9-203ENST00000522183 XRN1Q8IZH2 1706 aaKnown RBP19.57■□□□□ 0.72
CASC9-203ENST00000522183 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
CASC9-203ENST00000522183 LRP6O75581 1613 aa19.57■□□□□ 0.72
CASC9-203ENST00000522183 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
CASC9-203ENST00000522183 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
CASC9-203ENST00000522183 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
CASC9-203ENST00000522183 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
CASC9-203ENST00000522183 CLTCL1P53675 1640 aa19.52■□□□□ 0.72
CASC9-203ENST00000522183 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
CASC9-203ENST00000522183 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
CASC9-203ENST00000522183 DCCP43146 1447 aa19.51■□□□□ 0.71
CASC9-203ENST00000522183 BRINP3Q76B58 766 aa19.5■□□□□ 0.71
CASC9-203ENST00000522183 ASXL1Q8IXJ9 1541 aa19.5■□□□□ 0.71
CASC9-203ENST00000522183 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
CASC9-203ENST00000522183 METP08581 1390 aa19.48■□□□□ 0.71
CASC9-203ENST00000522183 KIF1BO60333 1816 aa19.48■□□□□ 0.71
CASC9-203ENST00000522183 NHSL1Q5SYE7 1610 aa19.47■□□□□ 0.71
CASC9-203ENST00000522183 MST1RQ04912 1400 aa19.47■□□□□ 0.71
CASC9-203ENST00000522183 NALCNQ8IZF0 1738 aa19.47■□□□□ 0.71
CASC9-203ENST00000522183 ZNF772Q68DY9 489 aaPredicted RBP19.45■□□□□ 0.7
CASC9-203ENST00000522183 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
CASC9-203ENST00000522183 NUTM2BA6NNL0 878 aaPredicted RBP19.43■□□□□ 0.7
CASC9-203ENST00000522183 NUTM2EB1AL46 878 aaPredicted RBP19.43■□□□□ 0.7
CASC9-203ENST00000522183 NUTM2AQ8IVF1 878 aaPredicted RBP19.43■□□□□ 0.7
CASC9-203ENST00000522183 NAIPQ13075 1403 aa19.42■□□□□ 0.7
CASC9-203ENST00000522183 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
CASC9-203ENST00000522183 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
CASC9-203ENST00000522183 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
CASC9-203ENST00000522183 PTCH1Q13635 1447 aa19.36■□□□□ 0.69
CASC9-203ENST00000522183 AFF2P51816 1311 aa19.36■□□□□ 0.69
CASC9-203ENST00000522183 RXRBP28702 533 aa19.36■□□□□ 0.69
CASC9-203ENST00000522183 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
CASC9-203ENST00000522183 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
CASC9-203ENST00000522183 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
CASC9-203ENST00000522183 PPLO60437 1756 aa19.34■□□□□ 0.69
CASC9-203ENST00000522183 C1orf167Q5SNV9 1468 aa19.34■□□□□ 0.69
CASC9-203ENST00000522183 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.68
CASC9-203ENST00000522183 CDK12Q9NYV4 1490 aaPredicted RBP19.33■□□□□ 0.68
CASC9-203ENST00000522183 HFM1A2PYH4 1435 aa19.33■□□□□ 0.68
CASC9-203ENST00000522183 LAMC1P11047 1609 aa19.33■□□□□ 0.68
CASC9-203ENST00000522183 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
CASC9-203ENST00000522183 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
CASC9-203ENST00000522183 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
CASC9-203ENST00000522183 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
CASC9-203ENST00000522183 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
CASC9-203ENST00000522183 RPGRIP1LQ68CZ1 1315 aa19.28■□□□□ 0.68
CASC9-203ENST00000522183 ADAMTS2O95450 1211 aa19.26■□□□□ 0.67
CASC9-203ENST00000522183 ORAI2Q96SN7 254 aa19.26■□□□□ 0.67
CASC9-203ENST00000522183 RGS12O14924 1447 aa19.25■□□□□ 0.67
CASC9-203ENST00000522183 CDC42BPGQ6DT37 1551 aa19.24■□□□□ 0.67
CASC9-203ENST00000522183 QTRT2Q9H974 415 aaKnown RBP19.24■□□□□ 0.67
CASC9-203ENST00000522183 SOS2Q07890 1332 aaPredicted RBP19.24■□□□□ 0.67
CASC9-203ENST00000522183 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
CASC9-203ENST00000522183 NGLY1Q96IV0 654 aa19.23■□□□□ 0.67
CASC9-203ENST00000522183 COL22A1Q8NFW1 1626 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms