RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 RBM33Q96EV2 1170 aaKnown RBP31.96■■■□□ 2.71
PABPC1-218ENST00000521865 TET3O43151 1660 aa31.95■■■□□ 2.71
PABPC1-218ENST00000521865 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
PABPC1-218ENST00000521865 ROCK1Q13464 1354 aa31.94■■■□□ 2.7
PABPC1-218ENST00000521865 RIMS2Q9UQ26 1411 aa31.92■■■□□ 2.7
PABPC1-218ENST00000521865 UNC13BO14795 1591 aa31.9■■■□□ 2.7
PABPC1-218ENST00000521865 XIRP1Q702N8 1843 aaKnown RBP31.89■■■□□ 2.7
PABPC1-218ENST00000521865 PLEKHG1Q9ULL1 1385 aa31.89■■■□□ 2.7
PABPC1-218ENST00000521865 ZFYVE9O95405 1425 aa31.88■■■□□ 2.69
PABPC1-218ENST00000521865 FAM135BQ49AJ0 1406 aa31.87■■■□□ 2.69
PABPC1-218ENST00000521865 NUP155O75694 1391 aa31.87■■■□□ 2.69
PABPC1-218ENST00000521865 GCC2Q8IWJ2 1684 aa31.86■■■□□ 2.69
PABPC1-218ENST00000521865 NKTRP30414 1462 aaKnown RBP31.86■■■□□ 2.69
PABPC1-218ENST00000521865 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.86■■■□□ 2.69
PABPC1-218ENST00000521865 NUTM2DQ5VT03 806 aaPredicted RBP31.84■■■□□ 2.69
PABPC1-218ENST00000521865 MSH6P52701 1360 aa31.83■■■□□ 2.69
PABPC1-218ENST00000521865 TMEM131LA2VDJ0 1609 aa31.82■■■□□ 2.69
PABPC1-218ENST00000521865 NWD1Q149M9 1564 aa31.81■■■□□ 2.68
PABPC1-218ENST00000521865 E9PCH4 1651 aa31.8■■■□□ 2.68
PABPC1-218ENST00000521865 TBX22Q9Y458 520 aa31.79■■■□□ 2.68
PABPC1-218ENST00000521865 IQGAP3Q86VI3 1631 aa31.78■■■□□ 2.68
PABPC1-218ENST00000521865 MYO5BQ9ULV0 1848 aa31.77■■■□□ 2.68
PABPC1-218ENST00000521865 C14orf37Q86TY3 774 aa31.76■■■□□ 2.67
PABPC1-218ENST00000521865 SLAIN2Q9P270 581 aa31.73■■■□□ 2.67
PABPC1-218ENST00000521865 ROBO1Q9Y6N7 1651 aa31.72■■■□□ 2.67
PABPC1-218ENST00000521865 ADAMTS13Q76LX8 1427 aa31.68■■■□□ 2.66
PABPC1-218ENST00000521865 CHD2O14647 1828 aaKnown RBP31.65■■■□□ 2.66
PABPC1-218ENST00000521865 ZNF326Q5BKZ1 582 aaKnown RBP31.65■■■□□ 2.66
PABPC1-218ENST00000521865 RGS17Q9UGC6 210 aaPredicted RBP31.64■■■□□ 2.66
PABPC1-218ENST00000521865 PIK3R4Q99570 1358 aa31.64■■■□□ 2.66
PABPC1-218ENST00000521865 NCOA3Q9Y6Q9 1424 aa31.63■■■□□ 2.65
PABPC1-218ENST00000521865 DIP2AQ14689 1571 aa31.63■■■□□ 2.65
PABPC1-218ENST00000521865 AMOTL2Q9Y2J4 779 aa31.61■■■□□ 2.65
PABPC1-218ENST00000521865 ATF3P18847 181 aa31.6■■■□□ 2.65
PABPC1-218ENST00000521865 CADPS2Q86UW7 1296 aa31.59■■■□□ 2.65
PABPC1-218ENST00000521865 C19orf44Q9H6X5 657 aa31.58■■■□□ 2.65
PABPC1-218ENST00000521865 TRPM2O94759 1503 aa31.58■■■□□ 2.65
PABPC1-218ENST00000521865 RRBP1Q9P2E9 1410 aaKnown RBP31.55■■■□□ 2.64
PABPC1-218ENST00000521865 JCADQ9P266 1359 aa31.55■■■□□ 2.64
PABPC1-218ENST00000521865 PHLPP1O60346 1717 aa31.52■■■□□ 2.64
PABPC1-218ENST00000521865 SPHKAPQ2M3C7 1700 aa31.52■■■□□ 2.64
PABPC1-218ENST00000521865 PTPRUQ92729 1446 aa31.52■■■□□ 2.64
PABPC1-218ENST00000521865 POTEAQ6S8J7 498 aa31.5■■■□□ 2.63
PABPC1-218ENST00000521865 TRIM52Q96A61 297 aa31.5■■■□□ 2.63
PABPC1-218ENST00000521865 NAIPQ13075 1403 aa31.49■■■□□ 2.63
PABPC1-218ENST00000521865 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.46■■■□□ 2.63
PABPC1-218ENST00000521865 SETBP1Q9Y6X0 1596 aa31.45■■■□□ 2.63
PABPC1-218ENST00000521865 METP08581 1390 aa31.43■■■□□ 2.62
PABPC1-218ENST00000521865 CLTCL1P53675 1640 aa31.42■■■□□ 2.62
PABPC1-218ENST00000521865 COL16A1Q07092 1604 aaPredicted RBP31.42■■■□□ 2.62
PABPC1-218ENST00000521865 NRXN3Q9Y4C0 1643 aa31.42■■■□□ 2.62
PABPC1-218ENST00000521865 MEX3CQ5U5Q3 659 aaKnown RBP31.41■■■□□ 2.62
PABPC1-218ENST00000521865 BRINP3Q76B58 766 aa31.4■■■□□ 2.62
PABPC1-218ENST00000521865 SPATA31A6Q5VVP1 1343 aa31.39■■■□□ 2.62
PABPC1-218ENST00000521865 SLC4A1APQ9BWU0 796 aaKnown RBP31.38■■■□□ 2.61
PABPC1-218ENST00000521865 DCCP43146 1447 aa31.38■■■□□ 2.61
PABPC1-218ENST00000521865 NEXMIFQ5QGS0 1516 aa31.37■■■□□ 2.61
PABPC1-218ENST00000521865 HFM1A2PYH4 1435 aa31.36■■■□□ 2.61
PABPC1-218ENST00000521865 XRN1Q8IZH2 1706 aaKnown RBP31.35■■■□□ 2.61
PABPC1-218ENST00000521865 AHDC1Q5TGY3 1603 aaPredicted RBP31.35■■■□□ 2.61
PABPC1-218ENST00000521865 VGFO15240 615 aaPredicted RBP31.33■■■□□ 2.61
PABPC1-218ENST00000521865 LRP6O75581 1613 aa31.3■■■□□ 2.6
PABPC1-218ENST00000521865 MST1RQ04912 1400 aa31.3■■■□□ 2.6
PABPC1-218ENST00000521865 NUTM2BA6NNL0 878 aaPredicted RBP31.29■■■□□ 2.6
PABPC1-218ENST00000521865 NUTM2EB1AL46 878 aaPredicted RBP31.29■■■□□ 2.6
PABPC1-218ENST00000521865 NUTM2AQ8IVF1 878 aaPredicted RBP31.29■■■□□ 2.6
PABPC1-218ENST00000521865 KIF1BO60333 1816 aa31.28■■■□□ 2.6
PABPC1-218ENST00000521865 ADGRL3Q9HAR2 1447 aa31.28■■■□□ 2.6
PABPC1-218ENST00000521865 ASXL1Q8IXJ9 1541 aa31.28■■■□□ 2.6
PABPC1-218ENST00000521865 ZNF772Q68DY9 489 aaPredicted RBP31.26■■■□□ 2.59
PABPC1-218ENST00000521865 RPGRIP1LQ68CZ1 1315 aa31.25■■■□□ 2.59
PABPC1-218ENST00000521865 FOXD1Q16676 465 aa31.22■■■□□ 2.59
PABPC1-218ENST00000521865 SHPRHQ149N8 1683 aa31.22■■■□□ 2.59
PABPC1-218ENST00000521865 LRRC59Q96AG4 307 aaKnown RBP31.21■■■□□ 2.59
PABPC1-218ENST00000521865 DDX17Q92841 729 aaKnown RBP31.2■■■□□ 2.59
PABPC1-218ENST00000521865 SETD5Q9C0A6 1442 aa31.19■■■□□ 2.58
PABPC1-218ENST00000521865 PTCH1Q13635 1447 aa31.18■■■□□ 2.58
PABPC1-218ENST00000521865 ROBO2Q9HCK4 1378 aa31.17■■■□□ 2.58
PABPC1-218ENST00000521865 NALCNQ8IZF0 1738 aa31.15■■■□□ 2.58
PABPC1-218ENST00000521865 C1orf167Q5SNV9 1468 aa31.14■■■□□ 2.57
PABPC1-218ENST00000521865 CCDC144AA2RUR9 1427 aa31.13■■■□□ 2.57
PABPC1-218ENST00000521865 RGL3Q3MIN7 710 aa31.12■■■□□ 2.57
PABPC1-218ENST00000521865 NHSL1Q5SYE7 1610 aa31.12■■■□□ 2.57
PABPC1-218ENST00000521865 RXRBP28702 533 aa31.11■■■□□ 2.57
PABPC1-218ENST00000521865 SETD1AO15047 1707 aaKnown RBP31.1■■■□□ 2.57
PABPC1-218ENST00000521865 AFF2P51816 1311 aa31.1■■■□□ 2.57
PABPC1-218ENST00000521865 ORAI2Q96SN7 254 aa31.09■■■□□ 2.57
PABPC1-218ENST00000521865 MPHOSPH9Q99550 1183 aa31.09■■■□□ 2.57
PABPC1-218ENST00000521865 PNPLA6Q8IY17 1366 aa31.08■■■□□ 2.57
PABPC1-218ENST00000521865 C8orf37Q96NL8 207 aa31.08■■■□□ 2.57
PABPC1-218ENST00000521865 ADGRF5Q8IZF2 1346 aa31.06■■■□□ 2.56
PABPC1-218ENST00000521865 PPLO60437 1756 aa31.05■■■□□ 2.56
PABPC1-218ENST00000521865 STK26Q9P289 416 aa31.04■■■□□ 2.56
PABPC1-218ENST00000521865 PRAG1Q86YV5 1406 aa31.04■■■□□ 2.56
PABPC1-218ENST00000521865 ADAMTS2O95450 1211 aa31.01■■■□□ 2.55
PABPC1-218ENST00000521865 ANKRD30BQ9BXX2 1392 aa31■■■□□ 2.55
PABPC1-218ENST00000521865 SOS2Q07890 1332 aaPredicted RBP30.98■■■□□ 2.55
PABPC1-218ENST00000521865 ESCO1Q5FWF5 840 aa30.98■■■□□ 2.55
PABPC1-218ENST00000521865 NGLY1Q96IV0 654 aa30.98■■■□□ 2.55
PABPC1-218ENST00000521865 SPATA31E1Q6ZUB1 1445 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms