RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
MCPH1-204ENST00000521129 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
MCPH1-204ENST00000521129 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
MCPH1-204ENST00000521129 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
MCPH1-204ENST00000521129 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
MCPH1-204ENST00000521129 E9PCH4 1651 aa17.09■□□□□ 0.33
MCPH1-204ENST00000521129 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
MCPH1-204ENST00000521129 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
MCPH1-204ENST00000521129 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
MCPH1-204ENST00000521129 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
MCPH1-204ENST00000521129 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
MCPH1-204ENST00000521129 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
MCPH1-204ENST00000521129 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
MCPH1-204ENST00000521129 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
MCPH1-204ENST00000521129 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
MCPH1-204ENST00000521129 BCANQ96GW7 911 aa17.03■□□□□ 0.32
MCPH1-204ENST00000521129 ROBO1Q9Y6N7 1651 aa17.02■□□□□ 0.32
MCPH1-204ENST00000521129 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
MCPH1-204ENST00000521129 NUP155O75694 1391 aa17.02■□□□□ 0.31
MCPH1-204ENST00000521129 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
MCPH1-204ENST00000521129 MSH6P52701 1360 aa17.01■□□□□ 0.31
MCPH1-204ENST00000521129 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
MCPH1-204ENST00000521129 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
MCPH1-204ENST00000521129 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
MCPH1-204ENST00000521129 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
MCPH1-204ENST00000521129 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
MCPH1-204ENST00000521129 ITGAEP38570 1179 aa16.97■□□□□ 0.31
MCPH1-204ENST00000521129 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
MCPH1-204ENST00000521129 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
MCPH1-204ENST00000521129 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
MCPH1-204ENST00000521129 TRPM2O94759 1503 aa16.93■□□□□ 0.3
MCPH1-204ENST00000521129 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
MCPH1-204ENST00000521129 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
MCPH1-204ENST00000521129 PHLPP1O60346 1717 aa16.92■□□□□ 0.3
MCPH1-204ENST00000521129 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
MCPH1-204ENST00000521129 NRXN3Q9Y4C0 1643 aa16.9■□□□□ 0.3
MCPH1-204ENST00000521129 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
MCPH1-204ENST00000521129 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
MCPH1-204ENST00000521129 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
MCPH1-204ENST00000521129 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
MCPH1-204ENST00000521129 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
MCPH1-204ENST00000521129 JCADQ9P266 1359 aa16.88■□□□□ 0.29
MCPH1-204ENST00000521129 NAIPQ13075 1403 aa16.87■□□□□ 0.29
MCPH1-204ENST00000521129 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
MCPH1-204ENST00000521129 C14orf37Q86TY3 774 aa16.87■□□□□ 0.29
MCPH1-204ENST00000521129 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
MCPH1-204ENST00000521129 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
MCPH1-204ENST00000521129 DCCP43146 1447 aa16.86■□□□□ 0.29
MCPH1-204ENST00000521129 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
MCPH1-204ENST00000521129 ATF3P18847 181 aa16.85■□□□□ 0.29
MCPH1-204ENST00000521129 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
MCPH1-204ENST00000521129 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
MCPH1-204ENST00000521129 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
MCPH1-204ENST00000521129 KIF1BO60333 1816 aa16.82■□□□□ 0.28
MCPH1-204ENST00000521129 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
MCPH1-204ENST00000521129 METP08581 1390 aa16.82■□□□□ 0.28
MCPH1-204ENST00000521129 SPATA31A6Q5VVP1 1343 aa16.8■□□□□ 0.28
MCPH1-204ENST00000521129 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
MCPH1-204ENST00000521129 BRINP3Q76B58 766 aa16.79■□□□□ 0.28
MCPH1-204ENST00000521129 LRP6O75581 1613 aa16.78■□□□□ 0.28
MCPH1-204ENST00000521129 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
MCPH1-204ENST00000521129 MST1RQ04912 1400 aa16.77■□□□□ 0.27
MCPH1-204ENST00000521129 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
MCPH1-204ENST00000521129 SETD1AO15047 1707 aaKnown RBP16.75■□□□□ 0.27
MCPH1-204ENST00000521129 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
MCPH1-204ENST00000521129 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
MCPH1-204ENST00000521129 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
MCPH1-204ENST00000521129 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
MCPH1-204ENST00000521129 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
MCPH1-204ENST00000521129 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
MCPH1-204ENST00000521129 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
MCPH1-204ENST00000521129 SETD5Q9C0A6 1442 aa16.73■□□□□ 0.27
MCPH1-204ENST00000521129 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
MCPH1-204ENST00000521129 PPLO60437 1756 aa16.72■□□□□ 0.27
MCPH1-204ENST00000521129 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
MCPH1-204ENST00000521129 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
MCPH1-204ENST00000521129 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
MCPH1-204ENST00000521129 LAMC1P11047 1609 aa16.68■□□□□ 0.26
MCPH1-204ENST00000521129 C1orf167Q5SNV9 1468 aa16.67■□□□□ 0.26
MCPH1-204ENST00000521129 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
MCPH1-204ENST00000521129 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.26
MCPH1-204ENST00000521129 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
MCPH1-204ENST00000521129 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
MCPH1-204ENST00000521129 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
MCPH1-204ENST00000521129 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
MCPH1-204ENST00000521129 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
MCPH1-204ENST00000521129 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
MCPH1-204ENST00000521129 FOXD1Q16676 465 aa16.62■□□□□ 0.25
MCPH1-204ENST00000521129 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
MCPH1-204ENST00000521129 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
MCPH1-204ENST00000521129 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
MCPH1-204ENST00000521129 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
MCPH1-204ENST00000521129 RXRBP28702 533 aa16.6■□□□□ 0.25
MCPH1-204ENST00000521129 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
MCPH1-204ENST00000521129 AFF2P51816 1311 aa16.6■□□□□ 0.25
MCPH1-204ENST00000521129 SOS2Q07890 1332 aaPredicted RBP16.6■□□□□ 0.25
MCPH1-204ENST00000521129 TECPR2O15040 1411 aa16.6■□□□□ 0.25
MCPH1-204ENST00000521129 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
MCPH1-204ENST00000521129 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
MCPH1-204ENST00000521129 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms