RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
HMGB1P46-201ENST00000520062 ARID3CA6NKF2 412 aa9.99□□□□□ -0.81
HMGB1P46-201ENST00000520062 SPTLC1O15269 473 aa9.99□□□□□ -0.81
HMGB1P46-201ENST00000520062 RAD21O60216 631 aa9.99□□□□□ -0.81
HMGB1P46-201ENST00000520062 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
HMGB1P46-201ENST00000520062 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
HMGB1P46-201ENST00000520062 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
HMGB1P46-201ENST00000520062 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
HMGB1P46-201ENST00000520062 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
HMGB1P46-201ENST00000520062 SOCS7O14512 581 aa9.96□□□□□ -0.82
HMGB1P46-201ENST00000520062 RSBN1LQ6PCB5 846 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P46-201ENST00000520062 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P46-201ENST00000520062 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
HMGB1P46-201ENST00000520062 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
HMGB1P46-201ENST00000520062 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
HMGB1P46-201ENST00000520062 ARID3AQ99856 593 aa9.95□□□□□ -0.82
HMGB1P46-201ENST00000520062 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
HMGB1P46-201ENST00000520062 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
HMGB1P46-201ENST00000520062 KCNK17Q96T54 332 aa9.92□□□□□ -0.82
HMGB1P46-201ENST00000520062 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
HMGB1P46-201ENST00000520062 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 LILRB3O75022 631 aa9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 USP46P62068 366 aa9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 FBXO31Q5XUX0 539 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
HMGB1P46-201ENST00000520062 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
HMGB1P46-201ENST00000520062 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
HMGB1P46-201ENST00000520062 KDM4AO75164 1064 aa9.89□□□□□ -0.83
HMGB1P46-201ENST00000520062 RDH13Q8NBN7 331 aa9.89□□□□□ -0.83
HMGB1P46-201ENST00000520062 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
HMGB1P46-201ENST00000520062 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
HMGB1P46-201ENST00000520062 SLC4A5Q9BY07 1137 aa9.88□□□□□ -0.83
HMGB1P46-201ENST00000520062 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
HMGB1P46-201ENST00000520062 SMAPO00193 183 aa9.87□□□□□ -0.83
HMGB1P46-201ENST00000520062 GCGRP47871 477 aa9.87□□□□□ -0.83
HMGB1P46-201ENST00000520062 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
HMGB1P46-201ENST00000520062 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
HMGB1P46-201ENST00000520062 NDUFV2P19404 249 aa9.86□□□□□ -0.83
HMGB1P46-201ENST00000520062 QPCTQ16769 361 aa9.86□□□□□ -0.83
HMGB1P46-201ENST00000520062 WWC1Q8IX03 1113 aa9.86□□□□□ -0.83
HMGB1P46-201ENST00000520062 SERPINA10Q9UK55 444 aa9.86□□□□□ -0.83
HMGB1P46-201ENST00000520062 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P46-201ENST00000520062 HOXA2O43364 376 aa9.85□□□□□ -0.83
HMGB1P46-201ENST00000520062 CSPP1Q1MSJ5 1256 aa9.85□□□□□ -0.83
HMGB1P46-201ENST00000520062 PCDHB15Q9Y5E8 787 aa9.85□□□□□ -0.83
HMGB1P46-201ENST00000520062 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
HMGB1P46-201ENST00000520062 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 NUTM2DQ5VT03 806 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 CCDC97Q96F63 343 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P46-201ENST00000520062 AP1G2O75843 785 aa9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 PBX2P40425 430 aa9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P46-201ENST00000520062 SLC10A3P09131 477 aa9.81□□□□□ -0.84
HMGB1P46-201ENST00000520062 USP17L8P0C7I0 530 aa9.81□□□□□ -0.84
HMGB1P46-201ENST00000520062 FDX1P10109 184 aa9.81□□□□□ -0.84
HMGB1P46-201ENST00000520062 HDGFP51858 240 aaKnown RBP9.81□□□□□ -0.84
HMGB1P46-201ENST00000520062 GDPD2Q9HCC8 539 aa9.81□□□□□ -0.84
HMGB1P46-201ENST00000520062 HRCP23327 699 aa9.8□□□□□ -0.84
HMGB1P46-201ENST00000520062 PSEN2P49810 448 aa9.8□□□□□ -0.84
HMGB1P46-201ENST00000520062 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
HMGB1P46-201ENST00000520062 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
HMGB1P46-201ENST00000520062 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
HMGB1P46-201ENST00000520062 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
HMGB1P46-201ENST00000520062 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
HMGB1P46-201ENST00000520062 ERBB3P21860 1342 aa9.78□□□□□ -0.84
HMGB1P46-201ENST00000520062 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
HMGB1P46-201ENST00000520062 OTUD5Q96G74 571 aa9.77□□□□□ -0.85
HMGB1P46-201ENST00000520062 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
HMGB1P46-201ENST00000520062 MTMR2Q13614 643 aa9.76□□□□□ -0.85
HMGB1P46-201ENST00000520062 POTEEQ6S8J3 1075 aa9.76□□□□□ -0.85
HMGB1P46-201ENST00000520062 SEPT9Q9UHD8 586 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P46-201ENST00000520062 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
HMGB1P46-201ENST00000520062 NDUFB9Q9Y6M9 179 aa9.76□□□□□ -0.85
HMGB1P46-201ENST00000520062 PDIA4P13667 645 aaKnown RBP9.75□□□□□ -0.85
HMGB1P46-201ENST00000520062 ABL2P42684 1182 aa9.75□□□□□ -0.85
HMGB1P46-201ENST00000520062 HELBQ8NG08 1087 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P46-201ENST00000520062 VPS9D1Q9Y2B5 631 aa9.75□□□□□ -0.85
HMGB1P46-201ENST00000520062 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
HMGB1P46-201ENST00000520062 GJD4Q96KN9 370 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P46-201ENST00000520062 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
HMGB1P46-201ENST00000520062 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
HMGB1P46-201ENST00000520062 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
HMGB1P46-201ENST00000520062 CFHP08603 1231 aa9.72□□□□□ -0.85
HMGB1P46-201ENST00000520062 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 GUCA2AQ02747 115 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 FUT2Q10981 343 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 HLA-CQ95604 372 aa9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 CALR3Q96L12 384 aaKnown RBP9.71□□□□□ -0.86
HMGB1P46-201ENST00000520062 BHMG1C9JSJ3 638 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms