RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
TSNARE1-203ENST00000518928 ILDR2Q71H61 639 aa21.59■■□□□ 1.05
TSNARE1-203ENST00000518928 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.05
TSNARE1-203ENST00000518928 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
TSNARE1-203ENST00000518928 NAIPQ13075 1403 aa21.55■■□□□ 1.04
TSNARE1-203ENST00000518928 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
TSNARE1-203ENST00000518928 TOM1O60784 492 aa21.55■■□□□ 1.04
TSNARE1-203ENST00000518928 CHGAP10645 457 aaKnown RBP21.54■■□□□ 1.04
TSNARE1-203ENST00000518928 TMEM94Q12767 1356 aa21.5■■□□□ 1.03
TSNARE1-203ENST00000518928 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
TSNARE1-203ENST00000518928 NWD1Q149M9 1564 aa21.48■■□□□ 1.03
TSNARE1-203ENST00000518928 KCNA6P17658 529 aa21.48■■□□□ 1.03
TSNARE1-203ENST00000518928 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
TSNARE1-203ENST00000518928 BCANQ96GW7 911 aa21.47■■□□□ 1.03
TSNARE1-203ENST00000518928 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
TSNARE1-203ENST00000518928 PPP1R15AO75807 674 aaPredicted RBP21.45■■□□□ 1.02
TSNARE1-203ENST00000518928 CLTCL1P53675 1640 aa21.44■■□□□ 1.02
TSNARE1-203ENST00000518928 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
TSNARE1-203ENST00000518928 PROSER2Q86WR7 435 aaPredicted RBP21.43■■□□□ 1.02
TSNARE1-203ENST00000518928 CHD2O14647 1828 aaKnown RBP21.42■■□□□ 1.02
TSNARE1-203ENST00000518928 MED1Q15648 1581 aaPredicted RBP21.42■■□□□ 1.02
TSNARE1-203ENST00000518928 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
TSNARE1-203ENST00000518928 NKTRP30414 1462 aaKnown RBP21.4■■□□□ 1.02
TSNARE1-203ENST00000518928 PTPRUQ92729 1446 aa21.39■■□□□ 1.02
TSNARE1-203ENST00000518928 TRPM2O94759 1503 aa21.38■■□□□ 1.01
TSNARE1-203ENST00000518928 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
TSNARE1-203ENST00000518928 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
TSNARE1-203ENST00000518928 FOXD1Q16676 465 aa21.35■■□□□ 1.01
TSNARE1-203ENST00000518928 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSNARE1-203ENST00000518928 NEXMIFQ5QGS0 1516 aa21.34■■□□□ 1.01
TSNARE1-203ENST00000518928 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
TSNARE1-203ENST00000518928 DIP2AQ14689 1571 aa21.32■■□□□ 1
TSNARE1-203ENST00000518928 HDGFP51858 240 aaKnown RBP21.32■■□□□ 1
TSNARE1-203ENST00000518928 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
TSNARE1-203ENST00000518928 FAM135BQ49AJ0 1406 aa21.3■■□□□ 1
TSNARE1-203ENST00000518928 METP08581 1390 aa21.3■■□□□ 1
TSNARE1-203ENST00000518928 SETBP1Q9Y6X0 1596 aa21.3■■□□□ 1
TSNARE1-203ENST00000518928 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
TSNARE1-203ENST00000518928 MSH6P52701 1360 aa21.28■■□□□ 1
TSNARE1-203ENST00000518928 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
TSNARE1-203ENST00000518928 XRN1Q8IZH2 1706 aaKnown RBP21.28■■□□□ 1
TSNARE1-203ENST00000518928 KIF1BO60333 1816 aa21.26■□□□□ 0.99
TSNARE1-203ENST00000518928 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.25■□□□□ 0.99
TSNARE1-203ENST00000518928 SLAIN2Q9P270 581 aa21.24■□□□□ 0.99
TSNARE1-203ENST00000518928 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
TSNARE1-203ENST00000518928 SOCS7O14512 581 aa21.23■□□□□ 0.99
TSNARE1-203ENST00000518928 SETD1AO15047 1707 aaKnown RBP21.21■□□□□ 0.99
TSNARE1-203ENST00000518928 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
TSNARE1-203ENST00000518928 RGS17Q9UGC6 210 aaPredicted RBP21.19■□□□□ 0.98
TSNARE1-203ENST00000518928 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
TSNARE1-203ENST00000518928 NCOA3Q9Y6Q9 1424 aa21.18■□□□□ 0.98
TSNARE1-203ENST00000518928 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
TSNARE1-203ENST00000518928 PPLO60437 1756 aa21.18■□□□□ 0.98
TSNARE1-203ENST00000518928 COL16A1Q07092 1604 aaPredicted RBP21.16■□□□□ 0.98
TSNARE1-203ENST00000518928 C19orf44Q9H6X5 657 aa21.16■□□□□ 0.98
TSNARE1-203ENST00000518928 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
TSNARE1-203ENST00000518928 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
TSNARE1-203ENST00000518928 SPATA31E1Q6ZUB1 1445 aa21.13■□□□□ 0.97
TSNARE1-203ENST00000518928 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
TSNARE1-203ENST00000518928 ROBO2Q9HCK4 1378 aa21.12■□□□□ 0.97
TSNARE1-203ENST00000518928 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
TSNARE1-203ENST00000518928 MST1RQ04912 1400 aa21.12■□□□□ 0.97
TSNARE1-203ENST00000518928 RGL3Q3MIN7 710 aa21.11■□□□□ 0.97
TSNARE1-203ENST00000518928 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
TSNARE1-203ENST00000518928 ATF3P18847 181 aa21.1■□□□□ 0.97
TSNARE1-203ENST00000518928 BRINP3Q76B58 766 aa21.1■□□□□ 0.97
TSNARE1-203ENST00000518928 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
TSNARE1-203ENST00000518928 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
TSNARE1-203ENST00000518928 VGFO15240 615 aaPredicted RBP21.09■□□□□ 0.97
TSNARE1-203ENST00000518928 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
TSNARE1-203ENST00000518928 LRP6O75581 1613 aa21.08■□□□□ 0.97
TSNARE1-203ENST00000518928 AHDC1Q5TGY3 1603 aaPredicted RBP21.08■□□□□ 0.97
TSNARE1-203ENST00000518928 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.97
TSNARE1-203ENST00000518928 IFT172Q9UG01 1749 aa21.08■□□□□ 0.97
TSNARE1-203ENST00000518928 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.96
TSNARE1-203ENST00000518928 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
TSNARE1-203ENST00000518928 DCCP43146 1447 aa21.06■□□□□ 0.96
TSNARE1-203ENST00000518928 POTEAQ6S8J7 498 aa21.05■□□□□ 0.96
TSNARE1-203ENST00000518928 PTCH1Q13635 1447 aa21.04■□□□□ 0.96
TSNARE1-203ENST00000518928 JCADQ9P266 1359 aa21.04■□□□□ 0.96
TSNARE1-203ENST00000518928 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
TSNARE1-203ENST00000518928 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
TSNARE1-203ENST00000518928 TMEM132EQ6IEE7 984 aa21■□□□□ 0.95
TSNARE1-203ENST00000518928 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
TSNARE1-203ENST00000518928 C1orf167Q5SNV9 1468 aa20.99■□□□□ 0.95
TSNARE1-203ENST00000518928 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
TSNARE1-203ENST00000518928 STK26Q9P289 416 aa20.98■□□□□ 0.95
TSNARE1-203ENST00000518928 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
TSNARE1-203ENST00000518928 ORAI2Q96SN7 254 aa20.97■□□□□ 0.95
TSNARE1-203ENST00000518928 WAPLQ7Z5K2 1190 aa20.96■□□□□ 0.95
TSNARE1-203ENST00000518928 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
TSNARE1-203ENST00000518928 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
TSNARE1-203ENST00000518928 TECPR2O15040 1411 aa20.93■□□□□ 0.94
TSNARE1-203ENST00000518928 NUTM2BA6NNL0 878 aaPredicted RBP20.92■□□□□ 0.94
TSNARE1-203ENST00000518928 NUTM2EB1AL46 878 aaPredicted RBP20.92■□□□□ 0.94
TSNARE1-203ENST00000518928 NUTM2AQ8IVF1 878 aaPredicted RBP20.92■□□□□ 0.94
TSNARE1-203ENST00000518928 LRPPRCP42704 1394 aaKnown RBP20.92■□□□□ 0.94
TSNARE1-203ENST00000518928 CFAP70Q5T0N1 1121 aa20.91■□□□□ 0.94
TSNARE1-203ENST00000518928 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
TSNARE1-203ENST00000518928 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms